RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 HSD17B7P56937 341 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 MRPS21P82921 87 aaKnown RBP18.6■□□□□ 0.57
CLK3-202ENST00000395066 MFGE8Q08431 387 aaPredicted RBP18.6■□□□□ 0.57
CLK3-202ENST00000395066 C2orf76Q3KRA6 126 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 LRFN4Q6PJG9 635 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 TSSK4Q6SA08 328 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 TTLL10Q6ZVT0 673 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 ZNF417Q8TAU3 575 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 LIPHQ8WWY8 451 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 ZMAT3Q9HA38 289 aaKnown RBP18.6■□□□□ 0.57
CLK3-202ENST00000395066 TAS2R8Q9NYW2 309 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 ASXL3Q9C0F0 2248 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 NUP210LQ5VU65 1888 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 TMEM212A6NML5 194 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 IL33O95760 270 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 TXNDC12O95881 172 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 HPP00738 406 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 IGF2P01344 180 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 APEHP13798 732 aaKnown RBP18.6■□□□□ 0.57
CLK3-202ENST00000395066 DRD1P21728 446 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 ZP2Q05996 745 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 C11orf88Q6PI97 169 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 TMEM205Q6UW68 189 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 KDM8Q8N371 416 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 OR6N1Q8NGY5 312 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 MRPS24Q96EL2 167 aaKnown RBP18.6■□□□□ 0.57
CLK3-202ENST00000395066 DCBLD2Q96PD2 775 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 PELOQ9BRX2 385 aaKnown RBP18.6■□□□□ 0.57
CLK3-202ENST00000395066 MFFQ9GZY8 342 aa18.6■□□□□ 0.57
CLK3-202ENST00000395066 DHCR7Q9UBM7 475 aaKnown RBP18.6■□□□□ 0.57
CLK3-202ENST00000395066 APOC3P02656 99 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 ATRAIDQ6UW56 229 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 SDR16C5Q8N3Y7 309 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 OR6K3Q8NGY3 331 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 OTOSQ8NHW6 89 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 STK35Q8TDR2 534 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 MCHR2Q969V1 340 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 TCTN2Q96GX1 697 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 MPZL1O95297 269 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 RLN2P04090 185 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 CAPZBP47756 277 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 SORDQ00796 357 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 MPPED2Q15777 294 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 ANKRD16Q6P6B7 361 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 TMEM151BQ8IW70 566 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 CDV3Q9UKY7 258 aaKnown RBP18.59■□□□□ 0.57
CLK3-202ENST00000395066 WDR87Q6ZQQ6 2873 aa18.59■□□□□ 0.57
CLK3-202ENST00000395066 TMEM272A0A1B0GTI8 110 aa18.58■□□□□ 0.57
CLK3-202ENST00000395066 SLC16A7O60669 478 aa18.58■□□□□ 0.57
CLK3-202ENST00000395066 RPA2P15927 270 aa18.58■□□□□ 0.57
CLK3-202ENST00000395066 CXCR1P25024 350 aa18.58■□□□□ 0.57
CLK3-202ENST00000395066 MPGP29372 298 aa18.58■□□□□ 0.57
CLK3-202ENST00000395066 GABRA4P48169 554 aa18.58■□□□□ 0.57
CLK3-202ENST00000395066 SKP1P63208 163 aa18.58■□□□□ 0.57
CLK3-202ENST00000395066 KIAA0895LQ68EN5 471 aa18.58■□□□□ 0.57
CLK3-202ENST00000395066 FAM3DQ96BQ1 224 aa18.58■□□□□ 0.57
CLK3-202ENST00000395066 ATG5Q9H1Y0 275 aa18.58■□□□□ 0.57
CLK3-202ENST00000395066 LANCL2Q9NS86 450 aa18.58■□□□□ 0.57
CLK3-202ENST00000395066 CGGBP1Q9UFW8 167 aaPredicted RBP18.58■□□□□ 0.57
CLK3-202ENST00000395066 ACKR1Q16570 336 aa18.58■□□□□ 0.56
CLK3-202ENST00000395066 KRT77Q7Z794 578 aa18.58■□□□□ 0.56
CLK3-202ENST00000395066 METTL21AQ8WXB1 218 aa18.58■□□□□ 0.56
CLK3-202ENST00000395066 MRPL38Q96DV4 380 aaKnown RBP18.58■□□□□ 0.56
CLK3-202ENST00000395066 SLC38A3Q99624 504 aa18.58■□□□□ 0.56
CLK3-202ENST00000395066 OR11A1Q9GZK7 315 aa18.58■□□□□ 0.56
CLK3-202ENST00000395066 MRPL22Q9NWU5 206 aaKnown RBP18.58■□□□□ 0.56
CLK3-202ENST00000395066 WDFY3Q8IZQ1 3526 aa18.58■□□□□ 0.56
CLK3-202ENST00000395066 XKRYO14609 159 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 PRKACAP17612 351 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 PPICP45877 212 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 EGR3Q06889 387 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 ARHGAP40Q5TG30 622 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 OR10K2Q6IF99 312 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 RELL2Q8NC24 303 aaPredicted RBP18.57■□□□□ 0.56
CLK3-202ENST00000395066 BGLAPP02818 100 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 CTLA4P16410 223 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 NR0B1P51843 470 aaKnown RBP18.57■□□□□ 0.56
CLK3-202ENST00000395066 C4orf46Q504U0 113 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 NDUFAF7Q7L592 441 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 PXT1Q8NFP0 134 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 OR10Z1Q8NGY1 313 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 KLHDC7BQ96G42 594 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 TPSD1Q9BZJ3 242 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 APMAPQ9HDC9 416 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 MMP17Q9ULZ9 603 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 B9D1Q9UPM9 204 aa18.57■□□□□ 0.56
CLK3-202ENST00000395066 M0QYG6 137 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 NDUFA2O43678 99 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 AKAIN1P0CW23 69 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 SCAND1P57086 179 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 INSM1Q01101 510 aaPredicted RBP18.56■□□□□ 0.56
CLK3-202ENST00000395066 RASGEF1BQ0VAM2 473 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 BIKQ13323 160 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 SLC17A1Q14916 467 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 C17orf107Q6ZR85 190 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 OR51A2Q8NGJ7 313 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 OR8B4Q96RC9 309 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 NUDT9Q9BW91 350 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 ADAM19Q9H013 955 aa18.56■□□□□ 0.56
CLK3-202ENST00000395066 SLC25A32Q9H2D1 315 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms