RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 MGAT2Q10469 447 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 ABHD13Q7L211 337 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 APOOQ9BUR5 198 aa12.95□□□□□ -0.34
CLIP2-203ENST00000395060 PARP12Q9H0J9 701 aaKnown RBP12.95□□□□□ -0.34
CLIP2-203ENST00000395060 ZNF275Q9NSD4 429 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-203ENST00000395060 GPN3Q9UHW5 284 aaPredicted RBP12.95□□□□□ -0.34
CLIP2-203ENST00000395060 A0A1B0GW55 424 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 CDC14CA4D256 554 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 RNF222A6NCQ9 220 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 ZNF736B4DX44 427 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-203ENST00000395060 EIF1AYO14602 144 aaKnown RBP12.94□□□□□ -0.34
CLIP2-203ENST00000395060 DUX4L2P0CJ85 424 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 DUX4L3P0CJ86 424 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 DUX4L4P0CJ87 422 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 DUX4L5P0CJ88 424 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 DUX4L6P0CJ89 424 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 DUX4L7P0CJ90 424 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 CBX5P45973 191 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 PPP1R1AQ13522 171 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 TDGQ13569 410 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 GGTLC2Q14390 218 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 C11orf87Q6NUJ2 197 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 GTPBP8Q8N3Z3 284 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-203ENST00000395060 LILRB1Q8NHL6 650 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-203ENST00000395060 NANPQ8TBE9 248 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 NUDCD2Q8WVJ2 157 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 SEH1LQ96EE3 360 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 KTI12Q96EK9 354 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-203ENST00000395060 CST11Q9H112 138 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 DUX4Q9UBX2 424 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 PILRAQ9UKJ1 303 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 B9D1Q9UPM9 204 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 CDC40O60508 579 aaKnown RBP eCLIP12.94□□□□□ -0.34
CLIP2-203ENST00000395060 EIF4E2O60573 245 aaKnown RBP12.94□□□□□ -0.34
CLIP2-203ENST00000395060 KAT7O95251 611 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 MAOAP21397 527 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 GPR85P60893 370 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 TFF2Q03403 129 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 GPR18Q14330 331 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 SMAD2Q15796 467 aaKnown RBP12.94□□□□□ -0.34
CLIP2-203ENST00000395060 KLHL26Q53HC5 615 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 NPSR1Q6W5P4 371 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 SLC16A9Q7RTY1 509 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 SAMD14Q8IZD0 417 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-203ENST00000395060 INO80EQ8NBZ0 244 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-203ENST00000395060 BHLHE23Q8NDY6 225 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 OR1J4Q8NGS1 313 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 ELP5Q8TE02 316 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 ZNF426Q9BUY5 554 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 HDAC8Q9BY41 377 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 RSPH9Q9H1X1 276 aaPredicted RBP12.94□□□□□ -0.34
CLIP2-203ENST00000395060 ETV7Q9Y603 341 aa12.94□□□□□ -0.34
CLIP2-203ENST00000395060 PRSS38A1L453 326 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 TMEM218A2RU14 115 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 MPZL1O95297 269 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 WISP1O95388 367 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 RD3LP0DJH9 198 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 MAOBP27338 520 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 CTAG1AP78358 180 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 SCRN3Q0VDG4 424 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 TGIF1Q15583 401 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 CD226Q15762 336 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 FBXO46Q6PJ61 603 aaPredicted RBP12.93□□□□□ -0.34
CLIP2-203ENST00000395060 ARMC10Q8N2F6 343 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 ZNF563Q8TA94 476 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 ZNF417Q8TAU3 575 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 HERVK_113Q902F9 699 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 SFXN1Q9H9B4 322 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 VSIG4Q9Y279 399 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 A0A087WUJ7 227 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 CYR61O00622 381 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 CSF2RBP32927 897 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 GPR143P51810 404 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 IL13RA1P78552 427 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 RPL18Q07020 188 aaKnown RBP12.93□□□□□ -0.34
CLIP2-203ENST00000395060 HFEQ30201 348 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 IGSF11Q5DX21 431 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 MESTQ5EB52 335 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 EXOSC6Q5RKV6 272 aaKnown RBP12.93□□□□□ -0.34
CLIP2-203ENST00000395060 MOB3CQ70IA8 216 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 CSNK1A1LQ8N752 337 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 ADAD2Q8NCV1 583 aaKnown RBP12.93□□□□□ -0.34
CLIP2-203ENST00000395060 CCDC107Q8WV48 283 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 DCUN1D4Q92564 292 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 CMTM3Q96MX0 182 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 SPACA5Q96QH8 159 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 LPAR4Q99677 370 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 UTP23Q9BRU9 249 aaKnown RBP12.93□□□□□ -0.34
CLIP2-203ENST00000395060 POTEKPQ9BYX7 375 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 TAS2R8Q9NYW2 309 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 MRPS18BQ9Y676 258 aaKnown RBP12.93□□□□□ -0.34
CLIP2-203ENST00000395060 FREM3P0C091 2139 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 IGKV1D-42A0A075B6H8 117 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 OR6A2O95222 327 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 CASRP41180 1078 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 TSFMP43897 325 aaKnown RBP12.93□□□□□ -0.34
CLIP2-203ENST00000395060 CAPZA2P47755 286 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 EIF1AXP47813 144 aaKnown RBP12.93□□□□□ -0.34
CLIP2-203ENST00000395060 RAB13P51153 203 aa12.93□□□□□ -0.34
CLIP2-203ENST00000395060 MFGE8Q08431 387 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms