RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 PROS1P07225 676 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ZNF17P17021 662 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ZP3P21754 424 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 CD82P27701 267 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 MPIP34949 423 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 XCR1P46094 333 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 PDLIM4P50479 330 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 DUSP3P51452 185 aaPredicted RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 RPS15AP62244 130 aaKnown RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 ZXDAP98168 799 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ZNF763Q0D2J5 394 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 NRF1Q16656 503 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 AMZ1Q400G9 498 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 CES5AQ6NT32 575 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 DNM1P34Q6PK57 102 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ASB18Q6ZVZ8 466 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 SVOPLQ8N434 492 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 C1orf52Q8N6N3 182 aaKnown RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 C11orf44Q8N8P7 122 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 OR5P2Q8WZ92 322 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 WDR92Q96MX6 357 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 MS4A10Q96PG2 267 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 TECTBQ96PL2 329 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 OR2M4Q96R27 311 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 SRRQ9GZT4 340 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 FGF22Q9HCT0 170 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 IL1RAPQ9NPH3 570 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ATP13A2Q9NQ11 1180 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ARMCX1Q9P291 453 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 PSORS1C1Q9UIG5 152 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 KPTNQ9Y664 436 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 TDRD6O60522 2096 aaKnown RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 PRR23AA6NEV1 266 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 K7EP13 123 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ARPC2O15144 300 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 HYAL3O43820 417 aaPredicted RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 MED6O75586 246 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 RAF1P04049 648 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 FCGR1AP12314 374 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 CD33P20138 364 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 EFNA1P20827 205 aaPredicted RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 KITLGP21583 273 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 MLF1P58340 268 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 SORDQ00796 357 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 INSM1Q01101 510 aaPredicted RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 DHODHQ02127 395 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 TPBGQ13641 420 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 KIAA0141Q14154 515 aaPredicted RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 IL13RA2Q14627 380 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 OR2A2Q6IF42 318 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 MED27Q6P2C8 311 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 UNQ6126/PRO20091Q6UXV3 157 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 NRARPQ7Z6K4 114 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 RAB43Q86YS6 212 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 D2HGDHQ8N465 521 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 SPATA6LQ8N4H0 392 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 DTWD1Q8N5C7 304 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 LINC01356Q8N9X3 169 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 LGALS14Q8TCE9 139 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 GGHQ92820 318 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 MYDGFQ969H8 173 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 MRPL48Q96GC5 212 aaKnown RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 STACQ99469 402 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 SEPHS2Q99611 448 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 CDX2Q99626 313 aaPredicted RBP3.46□□□□□ -1.86
MCF2-203ENST00000370576 ECSITQ9BQ95 431 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 ZNF649Q9BS31 505 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 OR10A5Q9H207 317 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 TOR3AQ9H497 397 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 SLC28A3Q9HAS3 691 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 GID8Q9NWU2 228 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 TREM2Q9NZC2 230 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 PILRBQ9UKJ0 227 aa3.46□□□□□ -1.86
MCF2-203ENST00000370576 KIR2DL5BA0A0G2JN68 375 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 A0A0G2JND7 137 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 KIR2DL5BA0A0G2JPC4 375 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 A0A1B0GTI1 187 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 PQLC2LA1A4F0 135 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 RFXANKO14593 260 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 ZNF749O43361 778 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 SUPT3HO75486 399 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 OR6A2O95222 327 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 HTR1AP08908 422 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 TACR1P25103 407 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 CALCRP30988 508 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 GLRBP48167 497 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 SNRPNP63162 240 aaKnown RBP3.45□□□□□ -1.86
MCF2-203ENST00000370576 FAM53BQ14153 422 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 CEACAM21Q3KPI0 293 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 ATP6AP1LQ52LC2 224 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 CYBRD1Q53TN4 286 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 FAM219BQ5XKK7 198 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 SLC48A1Q6P1K1 146 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 RNF113BQ8IZP6 322 aaKnown RBP3.45□□□□□ -1.86
MCF2-203ENST00000370576 KIR2DL5AQ8N109 375 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 IQCF1Q8N6M8 205 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 KIR2DL5BQ8NHK3 375 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 SYNPRQ8TBG9 265 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 MRAPQ8TCY5 172 aa3.45□□□□□ -1.86
MCF2-203ENST00000370576 TMEM239Q8WW34 195 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms