RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SLC19A1P41440 591 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 KCNJ10P78508 379 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF385BQ569K4 471 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 TSEN54Q7Z6J9 526 aaKnown RBP15.89■□□□□ 0.13
COL27A1-201ENST00000356083 ANGPTL5Q86XS5 388 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 OR2G3Q8NGZ4 309 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 ZFPM2Q8WW38 1151 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 SLC5A6Q9Y289 635 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 SPO11Q9Y5K1 396 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 MEX3AA1L020 520 aaKnown RBP15.89■□□□□ 0.13
COL27A1-201ENST00000356083 HTR2CP28335 458 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 GPR19Q15760 415 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF596Q8TC21 504 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 BIRC8Q96P09 236 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 HCFC2Q9Y5Z7 792 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 OR2C1O95371 312 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 SLC25A6P12236 298 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 SPATA46Q5T0L3 261 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 CORO6Q6QEF8 472 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 SIGLECL1Q8N7X8 197 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 KHSRPQ92945 711 aaKnown RBP eCLIP15.89■□□□□ 0.13
COL27A1-201ENST00000356083 SLC2A9Q9NRM0 540 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 CDC14BO60729 498 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 DLX5P56178 289 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 HBA1P69905 142 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 VWA1Q6PCB0 445 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 PARS2Q7L3T8 475 aaKnown RBP15.89■□□□□ 0.13
COL27A1-201ENST00000356083 EXD3Q8N9H8 876 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 GPR26Q8NDV2 337 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 OR2M3Q8NG83 312 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 BTNL2Q9UIR0 455 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 A0A087WZY1 265 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 TMED7-TICAM2A0A0A6YYA0 188 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF724A8MTY0 619 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 MRPS21P82921 87 aaKnown RBP15.89■□□□□ 0.13
COL27A1-201ENST00000356083 DMRTC1Q5HYR2 192 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 CLLU1OSQ5K130 101 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 SAGE1Q9NXZ1 904 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 TMED7Q9Y3B3 224 aa15.89■□□□□ 0.13
COL27A1-201ENST00000356083 RGPD5Q99666 1765 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 IAPPP10997 89 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 NQO2P16083 231 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 HTR6P50406 440 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 FAM78AQ5JUQ0 283 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 OR2G6Q5TZ20 316 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 TMEM182Q6ZP80 229 aaPredicted RBP15.88■□□□□ 0.13
COL27A1-201ENST00000356083 SLC45A3Q96JT2 553 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 CTSFQ9UBX1 484 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 DUOX1Q9NRD9 1551 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 TMEM221A6NGB7 291 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 MKRN2OSH3BPM6 223 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 COX7A2P2O60397 106 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 AIFM1O95831 613 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF865P0CJ78 1059 aaPredicted RBP15.88■□□□□ 0.13
COL27A1-201ENST00000356083 EGFL6Q8IUX8 553 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 FBXL14Q8N1E6 418 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 ITPKCQ96DU7 683 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 DNAJC15Q9Y5T4 150 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 ARHGEF28Q8N1W1 1705 aaKnown RBP15.88■□□□□ 0.13
COL27A1-201ENST00000356083 HSF1Q00613 529 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 ACOT7LQ6ZUV0 252 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 SLC30A3Q99726 388 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 OR6C68A6NDL8 312 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 PCSK6P29122 969 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 CASP3P42574 277 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 SPACA1Q9HBV2 294 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 ZNF140P52738 457 aaPredicted RBP15.88■□□□□ 0.13
COL27A1-201ENST00000356083 ISCA2Q86U28 154 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 SLC35A4Q96G79 324 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 C12orf10Q9HB07 376 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 SULT1C4O75897 302 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 USF1P22415 310 aaPredicted RBP15.88■□□□□ 0.13
COL27A1-201ENST00000356083 RBMS2Q15434 407 aaKnown RBP15.88■□□□□ 0.13
COL27A1-201ENST00000356083 TATDN3Q17R31 274 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 GJC3Q8NFK1 279 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 TMEM106AQ96A25 262 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 TMIGD2Q96BF3 282 aa15.88■□□□□ 0.13
COL27A1-201ENST00000356083 MYO16Q9Y6X6 1858 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 FAM221AA4D161 298 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 SMLR1H3BR10 107 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 GNG10P50151 68 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 MRPL43Q8N983 215 aaKnown RBP15.87■□□□□ 0.13
COL27A1-201ENST00000356083 ACPTQ9BZG2 426 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 COMMD5Q9GZQ3 224 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 RANGRFQ9HD47 186 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-201ENST00000356083 RAB18Q9NP72 206 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 MPGP29372 298 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 FOXA1P55317 472 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 NHLRC2Q8NBF2 726 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 SLC24A4Q8NFF2 622 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 ZPBPQ9BS86 351 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 HES4Q9HCC6 221 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 NME2P1O60361 137 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 PRKRAO75569 313 aaKnown RBP15.87■□□□□ 0.13
COL27A1-201ENST00000356083 OPN1MWP04001 364 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 OPN1MW2P0DN77 364 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 OPN1MW3P0DN78 364 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 TPPP2P59282 170 aa15.87■□□□□ 0.13
COL27A1-201ENST00000356083 HOXA4Q00056 320 aaPredicted RBP15.87■□□□□ 0.13
COL27A1-201ENST00000356083 GAREM2Q75VX8 874 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms