RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 NXPE2Q96DL1 559 aa19.21■□□□□ 0.67
CCDC38-201ENST00000344280 CHIAQ9BZP6 476 aa19.21■□□□□ 0.67
CCDC38-201ENST00000344280 NPDC1Q9NQX5 325 aaPredicted RBP19.21■□□□□ 0.67
CCDC38-201ENST00000344280 ELF5Q9UKW6 265 aaPredicted RBP19.21■□□□□ 0.67
CCDC38-201ENST00000344280 U3KQ87 197 aa19.21■□□□□ 0.67
CCDC38-201ENST00000344280 ICMTO60725 284 aa19.21■□□□□ 0.67
CCDC38-201ENST00000344280 SQSTM1Q13501 440 aa19.21■□□□□ 0.67
CCDC38-201ENST00000344280 OR7A5Q15622 319 aa19.21■□□□□ 0.67
CCDC38-201ENST00000344280 SMAD2Q15796 467 aaKnown RBP19.21■□□□□ 0.67
CCDC38-201ENST00000344280 HYAL4Q2M3T9 481 aa19.21■□□□□ 0.67
CCDC38-201ENST00000344280 PCGF3Q3KNV8 242 aa19.21■□□□□ 0.67
CCDC38-201ENST00000344280 GLDNQ6ZMI3 551 aaPredicted RBP19.21■□□□□ 0.67
CCDC38-201ENST00000344280 ANKRD37Q7Z713 158 aa19.21■□□□□ 0.67
CCDC38-201ENST00000344280 LINC00346Q8IVM7 164 aa19.21■□□□□ 0.67
CCDC38-201ENST00000344280 NFAM1Q8NET5 270 aaPredicted RBP19.21■□□□□ 0.67
CCDC38-201ENST00000344280 WDR89Q96FK6 387 aaPredicted RBP19.21■□□□□ 0.67
CCDC38-201ENST00000344280 SCP2D1Q9UJQ7 156 aa19.21■□□□□ 0.67
CCDC38-201ENST00000344280 CIB4A0PJX0 185 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 TPOP07202 933 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 IFNGR1P15260 489 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 GLO1Q04760 184 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 PUDPQ08623 228 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 CSRP2Q16527 193 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 RHBDD2Q6NTF9 364 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 CATSPERDQ86XM0 798 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 FAM3DQ96BQ1 224 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 MED29Q9NX70 200 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 EIF3KQ9UBQ5 218 aaKnown RBP19.2■□□□□ 0.66
CCDC38-201ENST00000344280 TNRC18O15417 2968 aaPredicted RBP19.2■□□□□ 0.66
CCDC38-201ENST00000344280 H7C417 338 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 OR2T1O43869 369 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 PRAF2O60831 178 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 ZNF81P51508 661 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 RIDAP52758 137 aaKnown RBP19.2■□□□□ 0.66
CCDC38-201ENST00000344280 BLVRAP53004 296 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 METTL11BQ5VVY1 283 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 TMEM225Q6GV28 225 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 KMT5CQ86Y97 462 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 ZNF680Q8NEM1 530 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 OR51A2Q8NGJ7 313 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 OR52B4Q8NGK2 314 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 TAS2R4Q9NYW5 299 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 ZNF69Q9UC07 566 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 MTFP1Q9UDX5 166 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 DHDHQ9UQ10 334 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 EMC9Q9Y3B6 208 aa19.2■□□□□ 0.66
CCDC38-201ENST00000344280 TRIOBPQ9H2D6 2365 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 EXPH5Q8NEV8 1989 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 TRAV18A0A075B6X5 111 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 TMEM200CA6NKL6 621 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 NDUFB6O95139 128 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 STARD6P59095 220 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 KCTD18Q6PI47 426 aaPredicted RBP19.19■□□□□ 0.66
CCDC38-201ENST00000344280 OR4C16Q8NGL9 310 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 OR1J4Q8NGS1 313 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 OR52N5Q8NH56 324 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 GAL3ST1Q99999 423 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 TGIF2Q9GZN2 237 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 EMC3Q9P0I2 261 aa19.19■□□□□ 0.66
CCDC38-201ENST00000344280 LOC101059948A0A1B0GTJ6 334 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 PYCARD-AS1I3L0S3 204 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 SLC17A2O00624 439 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 RBBP9O75884 186 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 MPC2O95563 127 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 RAB11BQ15907 218 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 FAM166AQ6J272 317 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 SPEM1Q8N4L4 309 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 PTTG3PQ9NZH4 202 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 MED12Q93074 2177 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 TMEM272A0A1B0GTI8 110 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 ANKUB1A6NFN9 424 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 H3BML4 177 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 SRSF10O75494 262 aaKnown RBP19.18■□□□□ 0.66
CCDC38-201ENST00000344280 CFPP27918 469 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 SCAND1P57086 179 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 CORO6Q6QEF8 472 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 DCXRQ7Z4W1 244 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 SLC26A10Q8NG04 563 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 ASB10Q8WXI3 467 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 SLC25A28Q96A46 364 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 SORCS2Q96PQ0 1159 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 OR6C1Q96RD1 312 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 PIPOXQ9P0Z9 390 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 MGAT4CQ9UBM8 478 aa19.18■□□□□ 0.66
CCDC38-201ENST00000344280 CGGBP1Q9UFW8 167 aaPredicted RBP19.18■□□□□ 0.66
CCDC38-201ENST00000344280 LMX1BO60663 402 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 HEXBP07686 556 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 CRABP1P29762 137 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 MAP2K6P52564 334 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 POU3F1Q03052 451 aaPredicted RBP19.17■□□□□ 0.66
CCDC38-201ENST00000344280 C19orf57Q0VDD7 668 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 FOXF1Q12946 379 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 NKAIN1Q4KMZ8 207 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 TMEM234Q8WY98 164 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 DPCDQ9BVM2 203 aaPredicted RBP19.17■□□□□ 0.66
CCDC38-201ENST00000344280 IGLV3-12A0A075B6K2 115 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 LOC100289279A0A1B0GTE1 492 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 VSIG10L2P0DP72 767 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 CDH24Q86UP0 819 aa19.17■□□□□ 0.66
CCDC38-201ENST00000344280 ZNF248Q8NDW4 579 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms