RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 FAM185AQ8N0U4 392 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 LMNTD1Q8N9Z9 388 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 CYB561A3Q8NBI2 242 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 MORN4Q8NDC4 146 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 OR13C8Q8NGS7 320 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 TERB2Q8NHR7 220 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 ZBTB8AQ96BR9 441 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 GPR87Q9BY21 358 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 CWH43Q9H720 699 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 ZMAT3Q9HA38 289 aaKnown RBP8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 OR5AC2Q9NZP5 309 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 GULP1Q9UBP9 304 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 HS3ST4Q9Y661 456 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 MYBPHLA2RUH7 354 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 IFITM5A6NNB3 132 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 PLPP2O43688 288 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 TSPAN15O95858 294 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 FAUP35544 74 aaKnown RBP8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 CDC34P49427 236 aaPredicted RBP8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 ERVFC1-1P60608 527 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 UBE2KP61086 200 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 ARHGAP1Q07960 439 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 REEP3Q6NUK4 255 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 MTSS1LQ765P7 747 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 ERASQ7Z444 233 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 GALNTL5Q7Z4T8 443 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 ADCK2Q7Z695 626 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 LYG1Q8N1E2 194 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 OR13C3Q8NGS6 347 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 OR51F2Q8NH61 342 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 IFI44Q8TCB0 444 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 OR2AG1Q9H205 316 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 C5AR2Q9P296 337 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 MYOTQ9UBF9 498 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 VPS29Q9UBQ0 182 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 AKT3Q9Y243 479 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 WDR45Q9Y484 360 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 DOCK1Q14185 1865 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 PHIPQ8WWQ0 1821 aa8.76□□□□□ -1.01
PTCHD4-201ENST00000339488 H0YL77 283 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 PIN1P1O15428 100 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 AMY2AP04746 511 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 GALTP07902 379 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 PNLIPP16233 465 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 CD33P20138 364 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 MAOAP21397 527 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 NT5EP21589 574 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 LMAN2Q12907 356 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 MAP2K5Q13163 448 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 PPP1R1AQ13522 171 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 RAB35Q15286 201 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 ARTNQ5T4W7 220 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 RTN4RL1Q86UN2 441 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 ZBTB2Q8N680 514 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 OR51L1Q8NGJ5 315 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 OR13C9Q8NGT0 318 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 SAMD8Q96LT4 415 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 SPATC1LQ9H0A9 340 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 TRPM7Q96QT4 1865 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 HEATR5AQ86XA9 2040 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 TEX13DA0A0J9YY54 714 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 FAM171A2A8MVW0 826 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 PLRG1O43660 514 aaKnown RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 PMS2P2O95744 297 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 IL6RP08887 468 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 ZNF28P17035 718 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 BUD31P41223 144 aaPredicted RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 RAB7AP51149 207 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 ACTA2P62736 377 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 ACTG2P63267 376 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 ACTC1P68032 377 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 ACTA1P68133 377 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 ID2Q02363 134 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 RHEBQ15382 184 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 SYPL1Q16563 259 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 MOGAT2Q3SYC2 334 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 DNLZQ5SXM8 178 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 DRAM2Q6UX65 266 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 TAS1R1Q7RTX1 841 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 GJD3Q8N144 294 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 RARRES2Q99969 163 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 KCNJ16Q9NPI9 418 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 RNF150Q9ULK6 438 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 MRPS33Q9Y291 106 aaKnown RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 RCL1Q9Y2P8 373 aaKnown RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 WIF1Q9Y5W5 379 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 POLR2AP24928 1970 aaKnown RBP8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 LAMA3Q16787 3333 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 KIAA1671Q9BY89 1806 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 C20orf202A1L168 122 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 NPC1O15118 1278 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 SCGB1D1O95968 90 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 CST2P09228 141 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 EDNRAP25101 427 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 PCSK1P29120 753 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 CHRNB4P30926 498 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 IGFALSP35858 605 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 IFNGR2P38484 337 aa8.75□□□□□ -1.01
PTCHD4-201ENST00000339488 SOX2P48431 317 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms