RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 RNF166Q96A37 237 aaPredicted RBP16.97■□□□□ 0.31
PSPC1-201ENST00000338910 SLC25A28Q96A46 364 aa16.97■□□□□ 0.31
PSPC1-201ENST00000338910 G6PC3Q9BUM1 346 aa16.97■□□□□ 0.31
PSPC1-201ENST00000338910 WDR13Q9H1Z4 485 aa16.97■□□□□ 0.31
PSPC1-201ENST00000338910 MLXQ9UH92 298 aa16.97■□□□□ 0.31
PSPC1-201ENST00000338910 GP1BAP07359 652 aa16.97■□□□□ 0.31
PSPC1-201ENST00000338910 NARS2Q96I59 477 aaKnown RBP16.97■□□□□ 0.31
PSPC1-201ENST00000338910 ELF4Q99607 663 aaPredicted RBP16.97■□□□□ 0.31
PSPC1-201ENST00000338910 TSPAN10Q9H1Z9 355 aaPredicted RBP16.97■□□□□ 0.31
PSPC1-201ENST00000338910 ESRP2Q9H6T0 727 aaKnown RBP16.97■□□□□ 0.31
PSPC1-201ENST00000338910 A0A087WV48 116 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 NGFRP08138 427 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 CSF1P09603 554 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 PLA2G7Q13093 441 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 SHBQ15464 509 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 ZNF141Q15928 474 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 KRT77Q7Z794 578 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 ZNF546Q86UE3 836 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 LRFN5Q96NI6 719 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 CHST6Q9GZX3 395 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 APMAPQ9HDC9 416 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 LANCL2Q9NS86 450 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 TAS2R8Q9NYW2 309 aa16.96■□□□□ 0.31
PSPC1-201ENST00000338910 NPIPB9F8W1W9 429 aa16.96■□□□□ 0.3
PSPC1-201ENST00000338910 XRCC3O43542 346 aa16.96■□□□□ 0.3
PSPC1-201ENST00000338910 GLB1P16278 677 aa16.96■□□□□ 0.3
PSPC1-201ENST00000338910 DIO1P49895 249 aa16.96■□□□□ 0.3
PSPC1-201ENST00000338910 SERTAD2Q14140 314 aa16.96■□□□□ 0.3
PSPC1-201ENST00000338910 LY6G6FQ5SQ64 297 aa16.96■□□□□ 0.3
PSPC1-201ENST00000338910 LYSMD4Q5XG99 296 aa16.96■□□□□ 0.3
PSPC1-201ENST00000338910 OR51S1Q8NGJ8 323 aa16.96■□□□□ 0.3
PSPC1-201ENST00000338910 MAFAQ8NHW3 353 aaPredicted RBP16.96■□□□□ 0.3
PSPC1-201ENST00000338910 PTPMT1Q8WUK0 201 aaPredicted RBP16.96■□□□□ 0.3
PSPC1-201ENST00000338910 TRIM2Q9C040 744 aa16.96■□□□□ 0.3
PSPC1-201ENST00000338910 CYB5R1Q9UHQ9 305 aa16.96■□□□□ 0.3
PSPC1-201ENST00000338910 A0A0D9SG52 128 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 F8W036 122 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 H3BMH7 237 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 CSTAP01040 98 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 CLPSP04118 112 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 FOLR1P15328 257 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 STARP49675 285 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 PON3Q15166 354 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 KIRREL2Q6UWL6 708 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 SLC43A2Q8N370 569 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 GATSQ8NAP1 163 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 OR1L3Q8NH93 324 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 TSLPQ969D9 159 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 SLC19A3Q9BZV2 496 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 CHRNA10Q9GZZ6 450 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 TCF7L1Q9HCS4 588 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 ARRB1P49407 418 aaPredicted RBP16.95■□□□□ 0.3
PSPC1-201ENST00000338910 LTBQ06643 244 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 SCRN3Q0VDG4 424 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 C4orf46Q504U0 113 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 JMJD6Q6NYC1 403 aaPredicted RBP16.95■□□□□ 0.3
PSPC1-201ENST00000338910 PLXDC1Q8IUK5 500 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 PRSS58Q8IYP2 241 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 TMEM185AQ8NFB2 350 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 MRPL48Q96GC5 212 aaKnown RBP16.95■□□□□ 0.3
PSPC1-201ENST00000338910 ZNF426Q9BUY5 554 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 OR8D2Q9GZM6 311 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 FSCN3Q9NQT6 498 aa16.95■□□□□ 0.3
PSPC1-201ENST00000338910 PRR32B1ATL7 298 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 PSMD9O00233 223 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 GPR31O00270 319 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 DUX1O43812 170 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 AGTR1P30556 359 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 CSF2RBP32927 897 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 RAB13P51153 203 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 TMEM88Q6PEY1 159 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 UQCC3Q6UW78 93 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 MED25Q71SY5 747 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 RAB11FIP2Q7L804 512 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 ZNF550Q7Z398 422 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 TMEM151BQ8IW70 566 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 PUSL1Q8N0Z8 303 aaKnown RBP16.94■□□□□ 0.3
PSPC1-201ENST00000338910 KCNRGQ8N5I3 272 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 DUSP19Q8WTR2 217 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 ALX4Q9H161 411 aaPredicted RBP16.94■□□□□ 0.3
PSPC1-201ENST00000338910 PIGMQ9H3S5 423 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 C1orf198Q9H425 327 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 SLC39A1Q9NY26 324 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 SERINC4A6NH21 518 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 GUSBP08236 651 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 CSRP1P21291 193 aaKnown RBP16.94■□□□□ 0.3
PSPC1-201ENST00000338910 GPR85P60893 370 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 VWA2Q5GFL6 755 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 ULK3Q6PHR2 472 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.94■□□□□ 0.3
PSPC1-201ENST00000338910 LRRTM1Q86UE6 522 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 SLITRK2Q9H156 845 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 PRODH2Q9UF12 536 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 IER3IP1Q9Y5U9 82 aa16.94■□□□□ 0.3
PSPC1-201ENST00000338910 PQLC2LA1A4F0 135 aa16.93■□□□□ 0.3
PSPC1-201ENST00000338910 DISC1C4P0D8 188 aa16.93■□□□□ 0.3
PSPC1-201ENST00000338910 LINC01387J3KSC0 135 aa16.93■□□□□ 0.3
PSPC1-201ENST00000338910 AKAIN1P0CW23 69 aa16.93■□□□□ 0.3
PSPC1-201ENST00000338910 LUMP51884 338 aaPredicted RBP16.93■□□□□ 0.3
PSPC1-201ENST00000338910 Q499Y3 187 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms