RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SGK494L7N484 410 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 NME4O00746 187 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 KMOO15229 486 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 PI15O43692 258 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 GMFGO60234 142 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF254O75437 659 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 SOD1P00441 154 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 TNNI3P19429 210 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 ANOS1P23352 680 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 DPP4P27487 766 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 TEAD1P28347 426 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 S100A3P33764 101 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 HSPA13P48723 471 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 NDUFV3P56181 108 aaKnown RBP3.3□□□□□ -1.88
SMCO3-201ENST00000316048 CLDN8P56748 225 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 RPS14P62263 151 aaKnown RBP3.3□□□□□ -1.88
SMCO3-201ENST00000316048 RPS21P63220 83 aaKnown RBP3.3□□□□□ -1.88
SMCO3-201ENST00000316048 HMGCS1Q01581 520 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 LIPEQ05469 1076 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 ZP4Q12836 540 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 DOC2AQ14183 400 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 CAPRIN1Q14444 709 aaKnown RBP3.3□□□□□ -1.88
SMCO3-201ENST00000316048 HAGHQ16775 308 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 MOGAT2Q3SYC2 334 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 SLC36A3Q495N2 470 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 PAGE3Q5JUK9 113 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 PIP5KL1Q5T9C9 394 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 DDI2Q5TDH0 399 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 NANOGP8Q6NSW7 305 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 IZUMO2Q6UXV1 221 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 NUFIP2Q7Z417 695 aaKnown RBP3.3□□□□□ -1.88
SMCO3-201ENST00000316048 IFNEQ86WN2 208 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 LIX1Q8N485 282 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 OR52M1Q8NGK5 317 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 OR9A1PQ8NGU1 263 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 OR2T3Q8NH03 318 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 STARD8Q92502 1023 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 POP5Q969H6 163 aaKnown RBP3.3□□□□□ -1.88
SMCO3-201ENST00000316048 UBE2E3Q969T4 207 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 PPWD1Q96BP3 646 aaKnown RBP3.3□□□□□ -1.88
SMCO3-201ENST00000316048 BIRC7Q96CA5 298 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 COX14Q96I36 57 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 TEX37Q96LM6 180 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 VSTM2LQ96N03 204 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 OR52E6Q96RD3 313 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 HBEGFQ99075 208 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 KCTD14Q9BQ13 255 aaPredicted RBP3.3□□□□□ -1.88
SMCO3-201ENST00000316048 RPP25Q9BUL9 199 aaKnown RBP3.3□□□□□ -1.88
SMCO3-201ENST00000316048 GSDMCQ9BYG8 508 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 NANOGQ9H9S0 305 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 SGK2Q9HBY8 427 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 FARSBQ9NSD9 589 aaKnown RBP3.3□□□□□ -1.88
SMCO3-201ENST00000316048 CMTM6Q9NX76 183 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 SMPD3Q9NY59 655 aaPredicted RBP3.3□□□□□ -1.88
SMCO3-201ENST00000316048 UBAP1Q9NZ09 502 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 VPS29Q9UBQ0 182 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 PLXNA2O75051 1894 aa3.3□□□□□ -1.88
SMCO3-201ENST00000316048 BRCA2P51587 3418 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 PLXNB3Q9ULL4 1909 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 KCNE1BA0A087WTH5 132 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 TCRBV3S1A0A5B6 114 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 C9JVG2 144 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 H0YC42 278 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 H0YJX3 145 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 K7EQS6 105 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 TOXO94900 526 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 KRT8P05787 483 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 C1GALT1C1LP0DN25 315 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 BCKDHAP12694 445 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 UQCRBP14927 111 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 PRPS1L1P21108 318 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 CXCR2P25025 360 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 HTR1EP28566 365 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 IMPA1P29218 277 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 IL12AP29459 219 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 DRD3P35462 400 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 BDKRB1P46663 353 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 GBX2P52951 348 aaPredicted RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 MED21Q13503 144 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ARHGAP19Q14CB8 494 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 KIAA0040Q15053 153 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF146Q15072 292 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 LRRC36Q1X8D7 754 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 KIF26BQ2KJY2 2108 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 TMEM30BQ3MIR4 351 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 LINC01620Q4KN68 170 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 OGFRL1Q5TC84 451 aaPredicted RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 LPCAT4Q643R3 524 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 GLYATQ6IB77 296 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 LCN8Q6JVE9 175 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 NOXRED1Q6NXP6 359 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 MED27Q6P2C8 311 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 REG3GQ6UW15 175 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 RALGPS2Q86X27 583 aaPredicted RBP3.29□□□□□ -1.88
SMCO3-201ENST00000316048 METTL4Q8N3J2 472 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 SPEM1Q8N4L4 309 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF614Q8N883 585 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 SPERTQ8NA61 448 aa3.29□□□□□ -1.88
SMCO3-201ENST00000316048 OR6C4Q8NGE1 309 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms