RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 LRFN4Q6PJG9 635 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 DNM1P34Q6PK57 102 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 SLC25A47Q6Q0C1 308 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 TMPRSS11AQ6ZMR5 421 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 Q6ZS92 163 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 VASH1Q7L8A9 365 aaPredicted RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 HDDC2Q7Z4H3 204 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 MEIOBQ8N635 442 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 SLC26A10Q8NG04 563 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 NDNFQ8TB73 568 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 ABHD3Q8WU67 409 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 TMEM54Q969K7 222 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 MCHR2Q969V1 340 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 WDYHV1Q96HA8 205 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 AMELYQ99218 206 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 LDAHQ9H6V9 325 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 BABAM2Q9NXR7 383 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 KCNG2Q9UJ96 466 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 SF3B6Q9Y3B4 125 aaKnown RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 BOLA1Q9Y3E2 137 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 GRIP1Q9Y3R0 1128 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF726A6NNF4 738 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF593O00488 134 aaPredicted RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 RRP8O43159 456 aaKnown RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 AKAP8O43823 692 aaKnown RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 AIREO43918 545 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 KHDRBS3O75525 346 aaKnown RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 AQP8O94778 261 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 WNT11O96014 354 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 MT-ND5P03915 603 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 QDPRP09417 244 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 ALOX5APP20292 161 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 CRYBB2P43320 205 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 BDH1Q02338 343 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 HSF2Q03933 536 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 GLO1Q04760 184 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 RASGEF1BQ0VAM2 473 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 TBR1Q16650 682 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 RPTNQ6XPR3 784 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 LRRC69Q6ZNQ3 347 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 PLEKHG7Q6ZR37 379 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 SIAH3Q8IW03 269 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 SYS1Q8N2H4 156 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 OTOSQ8NHW6 89 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 RNF128Q8TEB7 428 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 UFD1Q92890 307 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 EXTL1Q92935 676 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 RNF166Q96A37 237 aaPredicted RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 PELI1Q96FA3 418 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 RBP7Q96R05 134 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 DCLRE1CQ96SD1 692 aaKnown RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 BCL7BQ9BQE9 202 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 CHCHD6Q9BRQ6 235 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 CENPOQ9BU64 300 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 EXO5Q9H790 373 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 TIGARQ9NQ88 270 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 ACOXLQ9NUZ1 547 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 MRM2Q9UI43 246 aaKnown RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 ST6GALNAC2Q9UJ37 374 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 FOXD3Q9UJU5 478 aaPredicted RBP6.17□□□□□ -1.42
PTCD2-201ENST00000308077 BSNQ9UPA5 3926 aa6.17□□□□□ -1.42
PTCD2-201ENST00000308077 LOC100506127A0A0U1RQW1 187 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 CENPBD1B2RD01 187 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 ABHD16AO95870 558 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 SPARCP09486 303 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 CPN1P15169 458 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 CELP19835 753 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 EDNRAP25101 427 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 LAP3P28838 519 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 CDAP32320 146 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 CSNK1A1P48729 337 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 ENTPD1P49961 510 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF133P52736 654 aaPredicted RBP6.16□□□□□ -1.42
PTCD2-201ENST00000308077 BLVRAP53004 296 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 ACTA2P62736 377 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 ACTG2P63267 376 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 ADAM8P78325 824 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 C20orf196Q8IYI0 205 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 FNDC9Q8TBE3 224 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 SNX33Q8WV41 574 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 C11orf40Q8WZ69 217 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 HTRA1Q92743 480 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 TMEM203Q969S6 136 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 ABHD17AQ96GS6 310 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 TRIM36Q9NQ86 728 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 GLTPQ9NZD2 209 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 LAMP5Q9UJQ1 280 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 GNG8Q9UK08 70 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 STUB1Q9UNE7 303 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 UGT2A1Q9Y4X1 527 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 PHF3Q92576 2039 aaKnown RBP6.16□□□□□ -1.42
PTCD2-201ENST00000308077 URB1O60287 2271 aaKnown RBP6.16□□□□□ -1.42
PTCD2-201ENST00000308077 ACACAQ13085 2346 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 IGKV3D-15A0A087WSY6 115 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 A0A1B0GVC2 190 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 A0A1W2PPL8 197 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 MKRN2OSH3BPM6 223 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 SLC22A1O15245 554 aa6.16□□□□□ -1.42
PTCD2-201ENST00000308077 HRGP04196 525 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms