RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 KIR2DS1A0A191URI9 304 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 OTOL1A6NHN0 477 aaPredicted RBP11.69□□□□□ -0.54
PTCD1-201ENST00000292478 ARGFXA6NJG6 315 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 AIPO00170 330 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 KIR2DS4P43632 304 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 KIR2DS1Q14954 304 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 ACKR1Q16570 336 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 BRICD5Q6PL45 260 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 ZNF775Q96BV0 537 aaPredicted RBP11.69□□□□□ -0.54
PTCD1-201ENST00000292478 KIRREL1Q96J84 757 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 MRGPRX4Q96LA9 322 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 CTRCQ99895 268 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 PBX4Q9BYU1 374 aa11.69□□□□□ -0.54
PTCD1-201ENST00000292478 GIPP09681 153 aaPredicted RBP11.68□□□□□ -0.54
PTCD1-201ENST00000292478 GLB1P16278 677 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 ZNF92Q03936 586 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 CPEB2Q7Z5Q1 589 aaKnown RBP11.68□□□□□ -0.54
PTCD1-201ENST00000292478 C16orf52Q8NHV5 167 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 IFI44Q8TCB0 444 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 ATPIF1Q9UII2 106 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 OR6C6A6NF89 314 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 FCMRO60667 390 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 CD1EP15812 388 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 GPR3P46089 330 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 CCR6P51684 374 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 SFRP5Q5T4F7 317 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 STT3BQ8TCJ2 826 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 SECTM1Q8WVN6 248 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 SMIM19Q96E16 107 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 TXNIPQ9H3M7 391 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 KCNIP2Q9NS61 270 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 B3GALT5Q9Y2C3 310 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 LOC107986453A0A1B0GWG9 222 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 SERPINA7P05543 415 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 KITLGP21583 273 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 TMEM196Q5HYL7 178 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 KCNIP4Q6PIL6 250 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 KDM8Q8N371 416 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 SLAMF6Q96DU3 332 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 ARHGDIGQ99819 225 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 EXOSC3Q9NQT5 275 aaKnown RBP11.68□□□□□ -0.54
PTCD1-201ENST00000292478 TIMM10BQ9Y5J6 103 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 ANKRD12Q6UB98 2062 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 C1QBP02746 253 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 PTGER4P35408 488 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 CDC20Q12834 499 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 IL10RAQ13651 578 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 RUNX2Q13950 521 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 ZNF74Q16587 644 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 GLYR1Q49A26 553 aaPredicted RBP11.68□□□□□ -0.54
PTCD1-201ENST00000292478 BEX5Q5H9J7 111 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 BHLHA9Q7RTU4 235 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 SLAMF9Q96A28 289 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 OPALINQ96PE5 141 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 DCLRE1CQ96SD1 692 aaKnown RBP11.68□□□□□ -0.54
PTCD1-201ENST00000292478 JAM3Q9BX67 310 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 GCM1Q9NP62 436 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 YARS2Q9Y2Z4 477 aaKnown RBP11.68□□□□□ -0.54
PTCD1-201ENST00000292478 RAB19A4D1S5 217 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 NXPH2O95156 264 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 LALBAP00709 142 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 UBALD2Q8IYN6 164 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 OR5D18Q8NGL1 313 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 OXGR1Q96P68 337 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTCD1-201ENST00000292478 OR51B4Q9Y5P0 310 aa11.68□□□□□ -0.54
PTCD1-201ENST00000292478 G3V3Y1 287 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 M0QYG6 137 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 PMP2P02689 132 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 FUCA1P04066 466 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 CNR1P21554 472 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 RPL18Q07020 188 aaKnown RBP11.67□□□□□ -0.54
PTCD1-201ENST00000292478 RNLSQ5VYX0 342 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 LINC00696Q6ZRV3 163 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 DPPA2Q7Z7J5 298 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 TTC9Q92623 222 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 INTS12Q96CB8 462 aaKnown RBP11.67□□□□□ -0.54
PTCD1-201ENST00000292478 UHRF2Q96PU4 802 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 GNG12Q9UBI6 72 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 NTNG1Q9Y2I2 539 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 A0A0B4J2A0 478 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 LAP3P28838 519 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 ALKAL2Q6UX46 152 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 TMEM179BQ7Z7N9 219 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 ZADH2Q8N4Q0 377 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 PXT1Q8NFP0 134 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 DMBX1Q8NFW5 382 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 OR6K3Q8NGY3 331 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 ZCCHC4Q9H5U6 513 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 SHPKQ9UHJ6 478 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 PRSS37A4D1T9 235 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 FBXO24O75426 580 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 CDK5R1Q15078 307 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 ZNF683Q8IZ20 524 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 SPEM1Q8N4L4 309 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 OR10K1Q8NGX5 313 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 WDR34Q96EX3 536 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 CNRIP1Q96F85 164 aaPredicted RBP11.67□□□□□ -0.54
PTCD1-201ENST00000292478 SEC22AQ96IW7 307 aa11.67□□□□□ -0.54
PTCD1-201ENST00000292478 SLAMF7Q9NQ25 335 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms