RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 DXOO77932 396 aaKnown RBP9.34□□□□□ -0.91
UPF3B-201ENST00000276201 GLCEO94923 617 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 CNR1P21554 472 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 CMPK1P30085 196 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 PTGER1P34995 402 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 TRA2AQ13595 282 aaKnown RBP eCLIP9.34□□□□□ -0.912e-6■■■■■ 34.6
UPF3B-201ENST00000276201 HFEQ30201 348 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 PAQR7Q86WK9 346 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 NPEPL1Q8NDH3 523 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 OR52E2Q8NGJ4 325 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 OR10K1Q8NGX5 313 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 ZMYND19Q96E35 227 aaPredicted RBP9.34□□□□□ -0.91
UPF3B-201ENST00000276201 SERINC2Q96SA4 455 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 NRTNQ99748 197 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 SLC25A21Q9BQT8 299 aaPredicted RBP9.34□□□□□ -0.91
UPF3B-201ENST00000276201 ASCL3Q9NQ33 180 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 STEAP1Q9UHE8 339 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 KCNE5Q9UJ90 142 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 PLEKHA6Q9Y2H5 1048 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 COLEC10Q9Y6Z7 277 aa9.34□□□□□ -0.91
UPF3B-201ENST00000276201 ACACAQ13085 2346 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 TMEM272A0A1B0GTI8 110 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 RNF222A6NCQ9 220 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 FAM74A7A6NL05 159 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 POM121CA8CG34 1229 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 H7C2Y5 167 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 BCL2L11O43521 198 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 ATG12O94817 140 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 RLN2P04090 185 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 PPP1CAP62136 330 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 RPS15AP62244 130 aaKnown RBP9.33□□□□□ -0.92
UPF3B-201ENST00000276201 DCDP81605 110 aaKnown RBP9.33□□□□□ -0.92
UPF3B-201ENST00000276201 MC2RQ01718 297 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 PLAURQ03405 335 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 EIF3IQ13347 325 aaKnown RBP9.33□□□□□ -0.92
UPF3B-201ENST00000276201 GPR68Q15743 365 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 FAM74A3Q4VXF1 159 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 DCAF12L2Q5VW00 463 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 DHRS7BQ6IAN0 325 aaPredicted RBP9.33□□□□□ -0.92
UPF3B-201ENST00000276201 IGF2-ASQ6U949 168 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 ZNF227Q86WZ6 799 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 OR52B4Q8NGK2 314 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 ZNF417Q8TAU3 575 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 PDCD1LG2Q9BQ51 273 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 TWSG1Q9GZX9 223 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 SCPEP1Q9HB40 452 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 TCF7L1Q9HCS4 588 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 COA4Q9NYJ1 87 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 GPN3Q9UHW5 284 aaPredicted RBP9.33□□□□□ -0.92
UPF3B-201ENST00000276201 MOKQ9UQ07 419 aa9.33□□□□□ -0.92
UPF3B-201ENST00000276201 ANKRD11Q6UB99 2663 aaPredicted RBP9.33□□□□□ -0.92
UPF3B-201ENST00000276201 A0A1B0GWA3 101 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 GGT3PA6NGU5 568 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 TMEM200CA6NKL6 621 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 LDB3O75112 727 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 IFNA4P05014 189 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 GKN3PP0CG01 181 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 CD37P11049 281 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 APEHP13798 732 aaKnown RBP9.32□□□□□ -0.92
UPF3B-201ENST00000276201 CPMP14384 443 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 HIST1H1CP16403 213 aaKnown RBP9.32□□□□□ -0.92
UPF3B-201ENST00000276201 SPI1P17947 270 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 ADRA2CP18825 462 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 ITPKBP27987 946 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 LTBQ06643 244 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 ALKBH1Q13686 389 aaKnown RBP9.32□□□□□ -0.92
UPF3B-201ENST00000276201 TSC22D1Q15714 1073 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 PCGF3Q3KNV8 242 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 LY6G6FQ5SQ64 297 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 GLT8D1Q68CQ7 371 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 JMJD6Q6NYC1 403 aaPredicted RBP9.32□□□□□ -0.92
UPF3B-201ENST00000276201 PLXDC1Q8IUK5 500 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 TMEM229BQ8NBD8 167 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 BPIFCQ8NFQ6 507 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 DMBX1Q8NFW5 382 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 OR51A7Q8NH64 312 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 GPR148Q8TDV2 347 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 GCDHQ92947 438 aaPredicted RBP9.32□□□□□ -0.92
UPF3B-201ENST00000276201 SLC46A1Q96NT5 459 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 TGM7Q96PF1 710 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 SLCO5A1Q9H2Y9 848 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 FLRT3Q9NZU0 649 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 PISDQ9UG56 409 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 TNFSF18Q9UNG2 199 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 CARHSP1Q9Y2V2 147 aaKnown RBP9.32□□□□□ -0.92
UPF3B-201ENST00000276201 OR6C74A6NCV1 312 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 IMPA2O14732 288 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 FGF16O43320 207 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 TLX3O43711 291 aaPredicted RBP9.32□□□□□ -0.92
UPF3B-201ENST00000276201 RAD1O60671 282 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 ADAM11O75078 769 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 TNFSF15O95150 251 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 ZFPL1O95159 310 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 CCL4P13236 92 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 MPZP25189 248 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 VWA2Q5GFL6 755 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 C17orf107Q6ZR85 190 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 SLC16A9Q7RTY1 509 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 SVBPQ8N300 66 aa9.32□□□□□ -0.92
UPF3B-201ENST00000276201 C12orf45Q8N5I9 185 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms