RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TSPAN32Q96QS1 320 aa20.41■□□□□ 0.86
MCF2L-201ENST00000261963 NRSN2Q9GZP1 204 aa20.41■□□□□ 0.86
MCF2L-201ENST00000261963 ADAM19Q9H013 955 aa20.41■□□□□ 0.86
MCF2L-201ENST00000261963 RAB33BQ9H082 229 aa20.41■□□□□ 0.86
MCF2L-201ENST00000261963 BIN3Q9NQY0 253 aa20.41■□□□□ 0.86
MCF2L-201ENST00000261963 MRM2Q9UI43 246 aaKnown RBP20.41■□□□□ 0.86
MCF2L-201ENST00000261963 GOSR2O14653 212 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 OR8G3PP0DMU2 310 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 VSIG10L2P0DP72 767 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 ART1P52961 327 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 ZNF117Q03924 483 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 C14orf28Q4W4Y0 310 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 MESTQ5EB52 335 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 HES5Q5TA89 166 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 GAL3ST4Q96RP7 486 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 NUDT9Q9BW91 350 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 MOKQ9UQ07 419 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 ALPK2Q86TB3 2170 aa20.4■□□□□ 0.86
MCF2L-201ENST00000261963 PYCARD-AS1I3L0S3 204 aa20.39■□□□□ 0.86
MCF2L-201ENST00000261963 UPK3AO75631 287 aa20.39■□□□□ 0.86
MCF2L-201ENST00000261963 UBBP0CG47 229 aa20.39■□□□□ 0.86
MCF2L-201ENST00000261963 UBCP0CG48 685 aaKnown RBP20.39■□□□□ 0.86
MCF2L-201ENST00000261963 RPS27AP62979 156 aaKnown RBP20.39■□□□□ 0.86
MCF2L-201ENST00000261963 UBA52P62987 128 aaKnown RBP20.39■□□□□ 0.86
MCF2L-201ENST00000261963 ZNF563Q8TA94 476 aa20.39■□□□□ 0.86
MCF2L-201ENST00000261963 SLC25A38Q96DW6 304 aa20.39■□□□□ 0.86
MCF2L-201ENST00000261963 LAT2Q9GZY6 243 aa20.39■□□□□ 0.86
MCF2L-201ENST00000261963 TSPAN10Q9H1Z9 355 aaPredicted RBP20.39■□□□□ 0.86
MCF2L-201ENST00000261963 ZNF768Q9H5H4 540 aaKnown RBP20.39■□□□□ 0.86
MCF2L-201ENST00000261963 SRA1Q9HD15 236 aaKnown RBP20.39■□□□□ 0.86
MCF2L-201ENST00000261963 RASL12Q9NYN1 266 aa20.39■□□□□ 0.86
MCF2L-201ENST00000261963 CTSFQ9UBX1 484 aa20.39■□□□□ 0.86
MCF2L-201ENST00000261963 SPEGQ15772 3267 aa20.39■□□□□ 0.86
MCF2L-201ENST00000261963 CDC14CA4D256 554 aa20.39■□□□□ 0.85
MCF2L-201ENST00000261963 GMFGO60234 142 aa20.39■□□□□ 0.85
MCF2L-201ENST00000261963 ABHD16AO95870 558 aa20.39■□□□□ 0.85
MCF2L-201ENST00000261963 MRPS10P82664 201 aaKnown RBP20.39■□□□□ 0.85
MCF2L-201ENST00000261963 CCDC157Q569K6 752 aa20.39■□□□□ 0.85
MCF2L-201ENST00000261963 IGSF11Q5DX21 431 aa20.39■□□□□ 0.85
MCF2L-201ENST00000261963 SLC6A19Q695T7 634 aa20.39■□□□□ 0.85
MCF2L-201ENST00000261963 ELP2Q6IA86 826 aa20.39■□□□□ 0.85
MCF2L-201ENST00000261963 OR2AK2Q8NG84 335 aa20.39■□□□□ 0.85
MCF2L-201ENST00000261963 ASXL3Q9C0F0 2248 aa20.39■□□□□ 0.85
MCF2L-201ENST00000261963 IFITM5A6NNB3 132 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 ATG12O94817 140 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 RPP14O95059 124 aaKnown RBP20.38■□□□□ 0.85
MCF2L-201ENST00000261963 PTH2RP49190 550 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 P2RX1P51575 399 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 POLR2GP62487 172 aaKnown RBP eCLIP20.38■□□□□ 0.85
MCF2L-201ENST00000261963 TOMM34Q15785 309 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-201ENST00000261963 HAGHLQ6PII5 290 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-201ENST00000261963 FCRLAQ7L513 359 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 C1orf216Q8TAB5 229 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 S100A16Q96FQ6 103 aaKnown RBP20.38■□□□□ 0.85
MCF2L-201ENST00000261963 TVP23AA6NH52 213 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 RHPN2P1A8MT19 583 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 WISP1O95388 367 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 OR1D5P58170 312 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 TMEM69Q5SWH9 247 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 LIPNQ5VXI9 398 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 SLC36A1Q7Z2H8 476 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 CDC20BQ86Y33 519 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 C9orf40Q8IXQ3 194 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 BARX1Q9HBU1 254 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-201ENST00000261963 GRHPRQ9UBQ7 328 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 CA14Q9ULX7 337 aa20.38■□□□□ 0.85
MCF2L-201ENST00000261963 MGMTP16455 207 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 CFHR1Q03591 330 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 EBPQ15125 230 aaKnown RBP20.37■□□□□ 0.85
MCF2L-201ENST00000261963 ELAVL1Q15717 326 aaKnown RBP20.37■□□□□ 0.85
MCF2L-201ENST00000261963 CCDC36Q8IYA8 594 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 OR4D10Q8NGI6 311 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 OR1L3Q8NH93 324 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 ADAD1Q96M93 576 aaKnown RBP20.37■□□□□ 0.85
MCF2L-201ENST00000261963 ELF4Q99607 663 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-201ENST00000261963 ACOT7O00154 380 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 DPP4P27487 766 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 STARP49675 285 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 NXPH1P58417 271 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 HNRNPKP61978 463 aaKnown RBP eCLIP20.37■□□□□ 0.852e-6■□□□□ 9
MCF2L-201ENST00000261963 SORDQ00796 357 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 ZP2Q05996 745 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 CSRP2Q16527 193 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 EMC4Q5J8M3 183 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 FAM74A1Q5RGS3 127 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 STPG1Q5TH74 334 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 DCAF12L2Q5VW00 463 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 C1QL3Q5VWW1 255 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 ZNF433Q8N7K0 673 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-201ENST00000261963 FRRS1LQ9P0K9 344 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 FOXJ3Q9UPW0 622 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 RP1P56715 2156 aa20.37■□□□□ 0.85
MCF2L-201ENST00000261963 SPAG17Q6Q759 2223 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 DISC1C4P0D8 188 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 HCRTR2O43614 444 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 PTHLHP12272 177 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 CNR1P21554 472 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 TSSK4Q6SA08 328 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 MOB3CQ70IA8 216 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 NUP54Q7Z3B4 507 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms