RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 HCFC2Q9Y5Z7 792 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 M0R036 132 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 CSTAP01040 98 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 SFTA3P0C7M3 94 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 LAG3P18627 525 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 SCAND1P57086 179 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 PRPS1P60891 318 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 SSBP1Q04837 148 aaKnown RBP12.89□□□□□ -0.35
SHPK-201ENST00000225519 ELAVL1Q15717 326 aaKnown RBP12.89□□□□□ -0.35
SHPK-201ENST00000225519 ZNF704Q6ZNC4 412 aaPredicted RBP12.89□□□□□ -0.35
SHPK-201ENST00000225519 SLC35D2Q76EJ3 337 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 OR4A4PQ8NGN8 299 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 GHRLQ9UBU3 117 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 KNL1Q8NG31 2342 aa12.89□□□□□ -0.35
SHPK-201ENST00000225519 NUDT19A8MXV4 375 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 FGF17O60258 216 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 MAOAP21397 527 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 HTR2CP28335 458 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 SERPINF1P36955 418 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 DNASE1L1P49184 302 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 ENPP2Q13822 863 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 HABP2Q14520 560 aaPredicted RBP12.88□□□□□ -0.35
SHPK-201ENST00000225519 DNM1P46Q6ZS02 220 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 USP53Q70EK8 1073 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 VN1R4Q7Z5H5 301 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 FOXRED2Q8IWF2 684 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 WFIKKN2Q8TEU8 576 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 SERINC2Q96SA4 455 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 BCL2L14Q9BZR8 327 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 DAPP1Q9UN19 280 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 SLC22A13Q9Y226 551 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 VSIG4Q9Y279 399 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 CUL9Q8IWT3 2517 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 ARPC3O15145 178 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 MED6O75586 246 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 SNRNP70P08621 437 aaKnown RBP12.88□□□□□ -0.35
SHPK-201ENST00000225519 MUC1P15941 1255 aaPredicted RBP12.88□□□□□ -0.35
SHPK-201ENST00000225519 NME2P22392 152 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 P2RY2P41231 377 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 SQSTM1Q13501 440 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 ALG10Q5BKT4 473 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 LINC01590Q5TEZ4 76 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 OR52R1Q8NGF1 315 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 OR10G6Q8NH81 332 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 STACQ99469 402 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 SULT4A1Q9BR01 284 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 ELOVL3Q9HB03 270 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 MBNL1Q9NR56 388 aaKnown RBP12.88□□□□□ -0.35
SHPK-201ENST00000225519 TMED7Q9Y3B3 224 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 PRRT4C9JH25 899 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 ACRP10323 421 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 RPS15AP62244 130 aaKnown RBP12.88□□□□□ -0.35
SHPK-201ENST00000225519 MESP2Q0VG99 397 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 FHL1Q13642 323 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 MEF2DQ14814 521 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 IL34Q6ZMJ4 242 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 C12orf40Q86WS4 652 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 ZNF761Q86XN6 746 aaPredicted RBP12.88□□□□□ -0.35
SHPK-201ENST00000225519 TCTEX1D2Q8WW35 142 aa12.88□□□□□ -0.35
SHPK-201ENST00000225519 DNAJB12Q9NXW2 375 aaKnown RBP12.88□□□□□ -0.35
SHPK-201ENST00000225519 C9orf170A2RU37 121 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 DOK2O60496 412 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 EIF1BO60739 113 aaKnown RBP12.87□□□□□ -0.35
SHPK-201ENST00000225519 STK17BO94768 372 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 GPANK1O95872 356 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 RENP00797 406 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 SERPINA5P05154 406 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 ADH1AP07327 375 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 ERCC1P07992 297 aaPredicted RBP12.87□□□□□ -0.35
SHPK-201ENST00000225519 IGFBP4P22692 258 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 EIF1P41567 113 aaKnown RBP12.87□□□□□ -0.35
SHPK-201ENST00000225519 ACAA2P42765 397 aaKnown RBP12.87□□□□□ -0.35
SHPK-201ENST00000225519 DCDP81605 110 aaKnown RBP12.87□□□□□ -0.35
SHPK-201ENST00000225519 TMEM52BQ4KMG9 183 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 RD3Q7Z3Z2 195 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 OR4N2Q8NGD1 307 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 RBM18Q96H35 190 aaKnown RBP12.87□□□□□ -0.35
SHPK-201ENST00000225519 CLCC1Q96S66 551 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 WDR76Q9H967 626 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 CERS4Q9HA82 394 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 TMEM14AQ9Y6G1 99 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 RNASEK-C17orf49H0YIS7 233 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 FGF16O43320 207 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 FGF18O76093 207 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 APEHP13798 732 aaKnown RBP12.87□□□□□ -0.35
SHPK-201ENST00000225519 FOSL1P15407 271 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 SPOCK1Q08629 439 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 WDR38Q5JTN6 314 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 MISPQ8IVT2 679 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 CRIPAKQ8N1N5 446 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 SLC41A2Q96JW4 573 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 DCBLD2Q96PD2 775 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 CD14P08571 375 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 NQO2P16083 231 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 WASP42768 502 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 PMPCAQ10713 525 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 ABHD13Q7L211 337 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 BIVMQ86UB2 503 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 OR13C8Q8NGS7 320 aa12.87□□□□□ -0.35
SHPK-201ENST00000225519 RELTQ969Z4 430 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms