RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SEH1LQ96EE3 360 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 KLHDC7BQ96G42 594 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 CXorf58Q96LI9 332 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 PTDSS2Q9BVG9 487 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.99□□□□□ -0.49
SRP54-201ENST00000216774 RTN4RQ9BZR6 473 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 TTYH1Q9H313 450 aaPredicted RBP11.99□□□□□ -0.49
SRP54-201ENST00000216774 TXNIPQ9H3M7 391 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 PDE7BQ9NP56 450 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 MRPL22Q9NWU5 206 aaKnown RBP11.99□□□□□ -0.49
SRP54-201ENST00000216774 SOHLH2Q9NX45 425 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 SLC22A13Q9Y226 551 aa11.99□□□□□ -0.49
SRP54-201ENST00000216774 IGKV3D-11A0A0A0MRZ8 115 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 TLCD2A6NGC4 264 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 ALG1L2C9J202 215 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 SLC16A7O60669 478 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 DXOO77932 396 aaKnown RBP11.98□□□□□ -0.49
SRP54-201ENST00000216774 DDAH2O95865 285 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 PNPP00491 289 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 IGHMP01871 453 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 SPARCP09486 303 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 FBXO45P0C2W1 286 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 GP1BBP13224 206 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 IGFBP3P17936 291 aaPredicted RBP11.98□□□□□ -0.49
SRP54-201ENST00000216774 HTR2CP28335 458 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 RIDAP52758 137 aaKnown RBP11.98□□□□□ -0.49
SRP54-201ENST00000216774 INSM1Q01101 510 aaPredicted RBP11.98□□□□□ -0.49
SRP54-201ENST00000216774 KCNAB1Q14722 419 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 TOMM34Q15785 309 aaPredicted RBP11.98□□□□□ -0.49
SRP54-201ENST00000216774 C1QL3Q5VWW1 255 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 TMEM205Q6UW68 189 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 NDUFAF7Q7L592 441 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 CATSPERDQ86XM0 798 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 OR6M1Q8NGM8 313 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 OR6K3Q8NGY3 331 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 ZNF721Q8TF20 911 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 ASB5Q8WWX0 329 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 LINC00052Q96N35 136 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 ZNF587Q96SQ5 575 aaPredicted RBP11.98□□□□□ -0.49
SRP54-201ENST00000216774 POFUT1Q9H488 388 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 PRMT8Q9NR22 394 aaPredicted RBP11.98□□□□□ -0.49
SRP54-201ENST00000216774 A0A1W2PPC1 479 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 MEIS3P1A6NDR6 274 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 RFPL4AA6NLU0 287 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 RFPL4AL1F8VTS6 287 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 TO15178 435 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 NPIPB7O75200 414 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 RAB3DO95716 219 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 EN2P19622 333 aaPredicted RBP11.98□□□□□ -0.49
SRP54-201ENST00000216774 POLR2HP52434 150 aaKnown RBP11.98□□□□□ -0.49
SRP54-201ENST00000216774 UBE2MP61081 183 aaKnown RBP11.98□□□□□ -0.49
SRP54-201ENST00000216774 ELAVL1Q15717 326 aaKnown RBP11.98□□□□□ -0.49
SRP54-201ENST00000216774 CHRDL2Q6WN34 429 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 PRR22Q8IZ63 422 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 PLPP7Q8NBV4 271 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 OR8S1Q8NH09 359 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 FAM174AQ8TBP5 190 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 SLC41A2Q96JW4 573 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 GAL3ST4Q96RP7 486 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 SLC38A3Q99624 504 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 SHARPINQ9H0F6 387 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 NKX2-4Q9H2Z4 354 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 KCNK15Q9H427 330 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 CD207Q9UJ71 328 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 GTF2A1LQ9UNN4 478 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 CYP8B1Q9UNU6 501 aa11.98□□□□□ -0.49
SRP54-201ENST00000216774 IGHV5-51A0A0C4DH38 117 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 A0A1W2PPC4 97 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 TMEM82A0PJX8 343 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 MEGF11A6BM72 1044 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 A8MUA0 341 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 DOK2O60496 412 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 FGF2P09038 288 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 PTGS2P35354 604 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 ADAM8P78325 824 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 MFGE8Q08431 387 aaPredicted RBP11.97□□□□□ -0.49
SRP54-201ENST00000216774 ELOCQ15369 112 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 CLVS2Q5SYC1 327 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 GLYATL3Q5SZD4 288 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 PXDC1Q5TGL8 231 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 ZNF660Q6AZW8 331 aaPredicted RBP11.97□□□□□ -0.49
SRP54-201ENST00000216774 POMZP3Q6PJE2 187 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 HSD17B13Q7Z5P4 300 aaPredicted RBP11.97□□□□□ -0.49
SRP54-201ENST00000216774 MARCH3Q86UD3 253 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 PDZD9Q8IXQ8 264 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 EIF4E3Q8N5X7 224 aaKnown RBP11.97□□□□□ -0.49
SRP54-201ENST00000216774 OR5M9Q8NGP3 310 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 LHFPL5Q8TAF8 219 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 DVL3Q92997 716 aaPredicted RBP11.97□□□□□ -0.49
SRP54-201ENST00000216774 SLC25A36Q96CQ1 311 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 TBL1XR1Q9BZK7 514 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 CHST6Q9GZX3 395 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 MFFQ9GZY8 342 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 COQ3Q9NZJ6 369 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 GLS2Q9UI32 602 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 SLC22A23A1A5C7 686 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 A8MVM7 634 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 TSPAN2O60636 221 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 NUDT14O95848 222 aa11.97□□□□□ -0.49
SRP54-201ENST00000216774 PLGP00747 810 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms