RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 POLLQ9UGP5 575 aa14.08□□□□□ -0.16
DDX41-219ENST00000629036 KIF16BQ96L93 1317 aa14.08□□□□□ -0.16
DDX41-219ENST00000629036 WTIPA6NIX2 430 aaPredicted RBP14.07□□□□□ -0.16
DDX41-219ENST00000629036 CTCFP49711 727 aaPredicted RBP14.07□□□□□ -0.16
DDX41-219ENST00000629036 LBX1P52954 281 aa14.07□□□□□ -0.16
DDX41-219ENST00000629036 KIAA2012Q0VF49 1180 aa14.07□□□□□ -0.16
DDX41-219ENST00000629036 AOC3Q16853 763 aa14.07□□□□□ -0.16
DDX41-219ENST00000629036 RABL6Q3YEC7 729 aaPredicted RBP14.07□□□□□ -0.16
DDX41-219ENST00000629036 MPNDQ8N594 471 aa14.07□□□□□ -0.16
DDX41-219ENST00000629036 ARHGAP45Q92619 1136 aa14.07□□□□□ -0.16
DDX41-219ENST00000629036 IRS2Q9Y4H2 1338 aa14.07□□□□□ -0.16
DDX41-219ENST00000629036 POTEIP0CG38 1075 aa14.06□□□□□ -0.16
DDX41-219ENST00000629036 POTEJP0CG39 1038 aa14.06□□□□□ -0.16
DDX41-219ENST00000629036 TRIM27P14373 513 aa14.06□□□□□ -0.16
DDX41-219ENST00000629036 ITGA6P23229 1130 aa14.06□□□□□ -0.16
DDX41-219ENST00000629036 CHADLQ6NUI6 762 aa14.06□□□□□ -0.16
DDX41-219ENST00000629036 DPP8Q6V1X1 898 aaPredicted RBP14.06□□□□□ -0.16
DDX41-219ENST00000629036 L3MBTL3Q96JM7 780 aaPredicted RBP14.06□□□□□ -0.16
DDX41-219ENST00000629036 GPR101Q96P66 508 aaPredicted RBP14.06□□□□□ -0.16
DDX41-219ENST00000629036 VPS33BQ9H267 617 aa14.06□□□□□ -0.16
DDX41-219ENST00000629036 BSDC1Q9NW68 430 aaPredicted RBP14.06□□□□□ -0.16
DDX41-219ENST00000629036 ARAP2Q8WZ64 1704 aa14.06□□□□□ -0.16
DDX41-219ENST00000629036 YDJCA8MPS7 323 aa14.05□□□□□ -0.16
DDX41-219ENST00000629036 INTS3Q68E01 1043 aaKnown RBP14.05□□□□□ -0.16
DDX41-219ENST00000629036 DPY19L2Q6NUT2 758 aa14.05□□□□□ -0.16
DDX41-219ENST00000629036 ANKRD18AQ8IVF6 992 aa14.05□□□□□ -0.16
DDX41-219ENST00000629036 TBC1D16Q8TBP0 767 aa14.05□□□□□ -0.16
DDX41-219ENST00000629036 ABHD8Q96I13 439 aa14.05□□□□□ -0.16
DDX41-219ENST00000629036 CDC5LQ99459 802 aaKnown RBP14.05□□□□□ -0.16
DDX41-219ENST00000629036 PCDH10Q9P2E7 1040 aa14.05□□□□□ -0.16
DDX41-219ENST00000629036 MINPP1Q9UNW1 487 aa14.05□□□□□ -0.16
DDX41-219ENST00000629036 CNTNAP1P78357 1384 aa14.05□□□□□ -0.16
DDX41-219ENST00000629036 PPIP5K2O43314 1243 aa14.04□□□□□ -0.16
DDX41-219ENST00000629036 DDNO94850 711 aaPredicted RBP14.04□□□□□ -0.16
DDX41-219ENST00000629036 LMBR1LQ6UX01 489 aa14.04□□□□□ -0.16
DDX41-219ENST00000629036 API5Q9BZZ5 524 aaKnown RBP14.04□□□□□ -0.16
DDX41-219ENST00000629036 BICC1Q9H694 974 aaKnown RBP14.04□□□□□ -0.16
DDX41-219ENST00000629036 C9orf78Q9NZ63 289 aaPredicted RBP14.04□□□□□ -0.16
DDX41-219ENST00000629036 MYH13Q9UKX3 1938 aa14.03□□□□□ -0.16
DDX41-219ENST00000629036 VEGFBP49765 207 aa14.03□□□□□ -0.16
DDX41-219ENST00000629036 CCT4P50991 539 aaKnown RBP14.03□□□□□ -0.16
DDX41-219ENST00000629036 ATF7IPQ6VMQ6 1270 aa14.03□□□□□ -0.16
DDX41-219ENST00000629036 LARGE2Q8N3Y3 721 aa14.03□□□□□ -0.16
DDX41-219ENST00000629036 SUPT20HQ8NEM7 779 aa14.03□□□□□ -0.16
DDX41-219ENST00000629036 NSFL1CQ9UNZ2 370 aaKnown RBP14.03□□□□□ -0.16
DDX41-219ENST00000629036 XDHP47989 1333 aa14.03□□□□□ -0.16
DDX41-219ENST00000629036 ZNF609O15014 1411 aa14.03□□□□□ -0.16
DDX41-219ENST00000629036 MED23Q9ULK4 1368 aa14.02□□□□□ -0.17
DDX41-219ENST00000629036 CCDC85CA6NKD9 419 aa14.02□□□□□ -0.17
DDX41-219ENST00000629036 MLLT1Q03111 559 aaPredicted RBP14.02□□□□□ -0.17
DDX41-219ENST00000629036 MEIS3Q99687 375 aa14.02□□□□□ -0.17
DDX41-219ENST00000629036 POLR2AP24928 1970 aaKnown RBP14.02□□□□□ -0.17
DDX41-219ENST00000629036 TNRC18O15417 2968 aaPredicted RBP14.01□□□□□ -0.17
DDX41-219ENST00000629036 UFL1O94874 794 aa14.01□□□□□ -0.17
DDX41-219ENST00000629036 RLBP1P12271 317 aa14.01□□□□□ -0.17
DDX41-219ENST00000629036 KLRK1P26718 216 aa14.01□□□□□ -0.17
DDX41-219ENST00000629036 RFX5P48382 616 aaPredicted RBP14.01□□□□□ -0.17
DDX41-219ENST00000629036 SCNN1DP51172 638 aa14.01□□□□□ -0.17
DDX41-219ENST00000629036 CXCL9Q07325 125 aa14.01□□□□□ -0.17
DDX41-219ENST00000629036 GPC2Q8N158 579 aa14.01□□□□□ -0.17
DDX41-219ENST00000629036 ZNF594Q96JF6 807 aaPredicted RBP14.01□□□□□ -0.17
DDX41-219ENST00000629036 ANKRD18BA2A2Z9 1011 aa14□□□□□ -0.17
DDX41-219ENST00000629036 NIM1KQ8IY84 436 aa14□□□□□ -0.17
DDX41-219ENST00000629036 WBP1LQ9NX94 342 aa14□□□□□ -0.17
DDX41-219ENST00000629036 ZNRF3Q9ULT6 936 aa14□□□□□ -0.17
DDX41-219ENST00000629036 ECM29Q5VYK3 1845 aa13.99□□□□□ -0.17
DDX41-219ENST00000629036 SNAP23O00161 211 aa13.99□□□□□ -0.17
DDX41-219ENST00000629036 HSPA8P11142 646 aaKnown RBP13.99□□□□□ -0.17
DDX41-219ENST00000629036 IGHMBP2P38935 993 aaKnown RBP13.99□□□□□ -0.17
DDX41-219ENST00000629036 CHRNDQ07001 517 aa13.99□□□□□ -0.17
DDX41-219ENST00000629036 IFIT5Q13325 482 aaKnown RBP13.99□□□□□ -0.17
DDX41-219ENST00000629036 WASHC4Q2M389 1173 aa13.99□□□□□ -0.17
DDX41-219ENST00000629036 TXNRD3Q86VQ6 643 aa13.99□□□□□ -0.17
DDX41-219ENST00000629036 JDP2Q8WYK2 163 aa13.99□□□□□ -0.17
DDX41-219ENST00000629036 PUS3Q9BZE2 481 aaKnown RBP13.99□□□□□ -0.17
DDX41-219ENST00000629036 KCNQ5Q9NR82 932 aa13.99□□□□□ -0.17
DDX41-219ENST00000629036 GGA1Q9UJY5 639 aa13.99□□□□□ -0.17
DDX41-219ENST00000629036 TRPM7Q96QT4 1865 aa13.99□□□□□ -0.17
DDX41-219ENST00000629036 C6orf229H3BNL8 230 aa13.98□□□□□ -0.17
DDX41-219ENST00000629036 ZKSCAN2Q63HK3 967 aa13.98□□□□□ -0.17
DDX41-219ENST00000629036 TMEM57Q8N5G2 664 aa13.98□□□□□ -0.17
DDX41-219ENST00000629036 VGLL2Q8N8G2 317 aa13.98□□□□□ -0.17
DDX41-219ENST00000629036 TMX4Q9H1E5 349 aaPredicted RBP13.98□□□□□ -0.17
DDX41-219ENST00000629036 TAF1DQ9H5J8 278 aaPredicted RBP13.98□□□□□ -0.17
DDX41-219ENST00000629036 DBNDD1Q9H9R9 158 aa13.98□□□□□ -0.17
DDX41-219ENST00000629036 ANKIB1Q9P2G1 1089 aa13.98□□□□□ -0.17
DDX41-219ENST00000629036 RIPOR2Q9Y4F9 1068 aa13.98□□□□□ -0.17
DDX41-219ENST00000629036 TMEM88BA6NKF7 163 aa13.97□□□□□ -0.17
DDX41-219ENST00000629036 RIMBP2O15034 1052 aa13.97□□□□□ -0.17
DDX41-219ENST00000629036 ECE2O60344 883 aa13.97□□□□□ -0.17
DDX41-219ENST00000629036 ATP2B4P23634 1241 aa13.97□□□□□ -0.17
DDX41-219ENST00000629036 KLHDC4Q8TBB5 520 aa13.97□□□□□ -0.17
DDX41-219ENST00000629036 FRAT1Q92837 279 aaPredicted RBP13.97□□□□□ -0.17
DDX41-219ENST00000629036 CLUAP1Q96AJ1 413 aa13.97□□□□□ -0.17
DDX41-219ENST00000629036 CHMP3Q9Y3E7 222 aa13.97□□□□□ -0.17
DDX41-219ENST00000629036 LRRFIP2Q9Y608 721 aaKnown RBP13.97□□□□□ -0.17
DDX41-219ENST00000629036 ZNF804BA4D1E1 1349 aa13.96□□□□□ -0.17
DDX41-219ENST00000629036 PASKQ96RG2 1323 aa13.96□□□□□ -0.17
DDX41-219ENST00000629036 SHTN1A0MZ66 631 aa13.96□□□□□ -0.17
DDX41-219ENST00000629036 IPO8O15397 1037 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms