RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 CIAPIN1Q6FI81 312 aa14.8□□□□□ -0.04
CPNE3-210ENST00000621245 DLK2Q6UY11 383 aa14.8□□□□□ -0.04
CPNE3-210ENST00000621245 USP50Q70EL3 339 aaPredicted RBP14.8□□□□□ -0.04
CPNE3-210ENST00000621245 G2E3Q7L622 706 aa14.8□□□□□ -0.04
CPNE3-210ENST00000621245 SUPT20HQ8NEM7 779 aa14.8□□□□□ -0.04
CPNE3-210ENST00000621245 DBNDD1Q9H9R9 158 aa14.8□□□□□ -0.04
CPNE3-210ENST00000621245 ADARB2Q9NS39 739 aaKnown RBP14.8□□□□□ -0.04
CPNE3-210ENST00000621245 RTL9Q8NET4 1388 aa14.8□□□□□ -0.04
CPNE3-210ENST00000621245 IGKV5-2P06315 115 aa14.79□□□□□ -0.04
CPNE3-210ENST00000621245 TNS4Q8IZW8 715 aa14.79□□□□□ -0.04
CPNE3-210ENST00000621245 ZBTB38Q8NAP3 1195 aaPredicted RBP14.79□□□□□ -0.04
CPNE3-210ENST00000621245 GLIS2Q9BZE0 524 aaPredicted RBP14.79□□□□□ -0.04
CPNE3-210ENST00000621245 TMX4Q9H1E5 349 aaPredicted RBP14.79□□□□□ -0.04
CPNE3-210ENST00000621245 VPS33BQ9H267 617 aa14.79□□□□□ -0.04
CPNE3-210ENST00000621245 NSFL1CQ9UNZ2 370 aaKnown RBP14.79□□□□□ -0.04
CPNE3-210ENST00000621245 MAP3K2Q9Y2U5 619 aa14.79□□□□□ -0.04
CPNE3-210ENST00000621245 WTIPA6NIX2 430 aaPredicted RBP14.78□□□□□ -0.04
CPNE3-210ENST00000621245 PSMD14O00487 310 aa14.78□□□□□ -0.04
CPNE3-210ENST00000621245 EGFRP00533 1210 aa14.78□□□□□ -0.04
CPNE3-210ENST00000621245 CALD1Q05682 793 aaKnown RBP14.78□□□□□ -0.04
CPNE3-210ENST00000621245 DOK7Q18PE1 504 aa14.78□□□□□ -0.04
CPNE3-210ENST00000621245 WWC1Q8IX03 1113 aa14.78□□□□□ -0.04
CPNE3-210ENST00000621245 TBC1D16Q8TBP0 767 aa14.78□□□□□ -0.04
CPNE3-210ENST00000621245 METTL22Q9BUU2 404 aaPredicted RBP14.78□□□□□ -0.04
CPNE3-210ENST00000621245 ABT1Q9ULW3 272 aaKnown RBP14.78□□□□□ -0.04
CPNE3-210ENST00000621245 PCCAP05165 728 aaPredicted RBP14.77□□□□□ -0.05
CPNE3-210ENST00000621245 CWC25Q9NXE8 425 aaPredicted RBP14.77□□□□□ -0.05
CPNE3-210ENST00000621245 PI4KAP2A4QPH2 592 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 C6orf229H3BNL8 230 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 ECE2O60344 883 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 RPS8P62241 208 aaKnown RBP14.76□□□□□ -0.05
CPNE3-210ENST00000621245 WASHC4Q2M389 1173 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 CWF19L2Q2TBE0 894 aaKnown RBP14.76□□□□□ -0.05
CPNE3-210ENST00000621245 DEFB115Q30KQ5 88 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 CCDC30Q5VVM6 783 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 CYP4F22Q6NT55 531 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 TMC4Q7Z404 712 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 MICALL2Q8IY33 904 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 PI4KAP1Q8N8J0 262 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 SPRYD3Q8NCJ5 442 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 CCDC191Q8NCU4 936 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 BCL2L13Q9BXK5 485 aa14.76□□□□□ -0.05
CPNE3-210ENST00000621245 CNOT7Q9UIV1 285 aaKnown RBP14.76□□□□□ -0.05
CPNE3-210ENST00000621245 WDR33Q9C0J8 1336 aaKnown RBP14.75□□□□□ -0.05
CPNE3-210ENST00000621245 FANCIQ9NVI1 1328 aa14.75□□□□□ -0.05
CPNE3-210ENST00000621245 SAMD7Q7Z3H4 446 aa14.75□□□□□ -0.05
CPNE3-210ENST00000621245 SALL2Q9Y467 1007 aaPredicted RBP14.75□□□□□ -0.05
CPNE3-210ENST00000621245 CDHR2Q9BYE9 1310 aa14.74□□□□□ -0.05
CPNE3-210ENST00000621245 PDE8AO60658 829 aa14.74□□□□□ -0.05
CPNE3-210ENST00000621245 UFL1O94874 794 aa14.74□□□□□ -0.05
CPNE3-210ENST00000621245 GRM1Q13255 1194 aa14.74□□□□□ -0.05
CPNE3-210ENST00000621245 TNIP1Q15025 636 aa14.74□□□□□ -0.05
CPNE3-210ENST00000621245 CCDC27Q2M243 656 aa14.74□□□□□ -0.05
CPNE3-210ENST00000621245 TWISTNBQ3B726 338 aaPredicted RBP14.74□□□□□ -0.05
CPNE3-210ENST00000621245 TBC1D10BQ4KMP7 808 aaPredicted RBP14.74□□□□□ -0.05
CPNE3-210ENST00000621245 MRS2Q9HD23 443 aa14.74□□□□□ -0.05
CPNE3-210ENST00000621245 WBP1LQ9NX94 342 aa14.74□□□□□ -0.05
CPNE3-210ENST00000621245 PGAP2Q9UHJ9 254 aa14.74□□□□□ -0.05
CPNE3-210ENST00000621245 ASTN2O75129 1339 aaPredicted RBP14.73□□□□□ -0.05
CPNE3-210ENST00000621245 AOC2O75106 756 aa14.73□□□□□ -0.05
CPNE3-210ENST00000621245 CELF2O95319 508 aaKnown RBP14.73□□□□□ -0.05
CPNE3-210ENST00000621245 PRKCSHP14314 528 aaPredicted RBP14.73□□□□□ -0.05
CPNE3-210ENST00000621245 CTSWP56202 376 aa14.73□□□□□ -0.05
CPNE3-210ENST00000621245 KSR2Q6VAB6 950 aa14.73□□□□□ -0.05
CPNE3-210ENST00000621245 CAPNS2Q96L46 248 aa14.73□□□□□ -0.05
CPNE3-210ENST00000621245 PODXL2Q9NZ53 605 aa14.73□□□□□ -0.05
CPNE3-210ENST00000621245 TLL2Q9Y6L7 1015 aa14.73□□□□□ -0.05
CPNE3-210ENST00000621245 NEURL1BA8MQ27 555 aa14.72□□□□□ -0.05
CPNE3-210ENST00000621245 HSPA8P11142 646 aaKnown RBP14.72□□□□□ -0.05
CPNE3-210ENST00000621245 CCDC152Q4G0S7 254 aa14.72□□□□□ -0.05
CPNE3-210ENST00000621245 GREM2Q9H772 168 aa14.72□□□□□ -0.05
CPNE3-210ENST00000621245 ZNF408Q9H9D4 720 aa14.72□□□□□ -0.05
CPNE3-210ENST00000621245 TAOK2Q9UL54 1235 aa14.72□□□□□ -0.05
CPNE3-210ENST00000621245 CASP8AP2Q9UKL3 1982 aa14.71□□□□□ -0.05
CPNE3-210ENST00000621245 ADM5C9JUS6 153 aa14.71□□□□□ -0.05
CPNE3-210ENST00000621245 DDX58O95786 925 aaKnown RBP14.71□□□□□ -0.05
CPNE3-210ENST00000621245 LBX1P52954 281 aa14.71□□□□□ -0.05
CPNE3-210ENST00000621245 TTLL11Q8NHH1 800 aa14.71□□□□□ -0.05
CPNE3-210ENST00000621245 TSHZ2Q9NRE2 1034 aa14.71□□□□□ -0.05
CPNE3-210ENST00000621245 ANKIB1Q9P2G1 1089 aa14.71□□□□□ -0.05
CPNE3-210ENST00000621245 IL16Q14005 1332 aa14.7□□□□□ -0.06
CPNE3-210ENST00000621245 RBM26Q5T8P6 1007 aaKnown RBP14.7□□□□□ -0.06
CPNE3-210ENST00000621245 UBE3BQ7Z3V4 1068 aa14.7□□□□□ -0.06
CPNE3-210ENST00000621245 SAPCD2Q86UD0 394 aa14.7□□□□□ -0.06
CPNE3-210ENST00000621245 USP48Q86UV5 1035 aa14.7□□□□□ -0.06
CPNE3-210ENST00000621245 TSKSQ9UJT2 592 aa14.7□□□□□ -0.06
CPNE3-210ENST00000621245 GGA1Q9UJY5 639 aa14.7□□□□□ -0.06
CPNE3-210ENST00000621245 ZNF316A6NFI3 1004 aaPredicted RBP14.69□□□□□ -0.06
CPNE3-210ENST00000621245 H7C1D1 291 aa14.69□□□□□ -0.06
CPNE3-210ENST00000621245 CTCFP49711 727 aaPredicted RBP14.69□□□□□ -0.06
CPNE3-210ENST00000621245 CASP7P55210 303 aa14.69□□□□□ -0.06
CPNE3-210ENST00000621245 EXOSC9Q06265 439 aaKnown RBP14.69□□□□□ -0.06
CPNE3-210ENST00000621245 FLIIQ13045 1269 aa14.69□□□□□ -0.06
CPNE3-210ENST00000621245 ANKRD18AQ8IVF6 992 aa14.69□□□□□ -0.06
CPNE3-210ENST00000621245 DPF2Q92785 391 aa14.69□□□□□ -0.06
CPNE3-210ENST00000621245 AIDAQ96BJ3 306 aa14.69□□□□□ -0.06
CPNE3-210ENST00000621245 ZIC5Q96T25 663 aa14.69□□□□□ -0.06
CPNE3-210ENST00000621245 EYA3Q99504 573 aa14.69□□□□□ -0.06
CPNE3-210ENST00000621245 MXD3Q9BW11 206 aa14.69□□□□□ -0.06
CPNE3-210ENST00000621245 STK31Q9BXU1 1019 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms