RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 ZNF330Q9Y3S2 320 aaPredicted RBP16.62■□□□□ 0.25
GRIA3-208ENST00000620581 IGHDP01880 384 aa16.61■□□□□ 0.25
GRIA3-208ENST00000620581 LRRCC1Q9C099 1032 aa16.61■□□□□ 0.25
GRIA3-208ENST00000620581 EIF5BO60841 1220 aaKnown RBP16.61■□□□□ 0.25
GRIA3-208ENST00000620581 IGHMBP2P38935 993 aaKnown RBP16.61■□□□□ 0.25
GRIA3-208ENST00000620581 ANKRD18AQ8IVF6 992 aa16.61■□□□□ 0.25
GRIA3-208ENST00000620581 ATP6V0A2Q9Y487 856 aa16.61■□□□□ 0.25
GRIA3-208ENST00000620581 ZNF804BA4D1E1 1349 aa16.6■□□□□ 0.25
GRIA3-208ENST00000620581 FAM161AQ3B820 660 aa16.6■□□□□ 0.25
GRIA3-208ENST00000620581 CCDC136Q96JN2 1154 aa16.6■□□□□ 0.25
GRIA3-208ENST00000620581 CCDC88AQ3V6T2 1871 aa16.6■□□□□ 0.25
GRIA3-208ENST00000620581 ECM29Q5VYK3 1845 aa16.59■□□□□ 0.25
GRIA3-208ENST00000620581 RPS8P62241 208 aaKnown RBP16.59■□□□□ 0.25
GRIA3-208ENST00000620581 FKBP1AP62942 108 aaKnown RBP16.59■□□□□ 0.25
GRIA3-208ENST00000620581 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
GRIA3-208ENST00000620581 CHD1LQ86WJ1 897 aa16.59■□□□□ 0.25
GRIA3-208ENST00000620581 RHPN1Q8TCX5 695 aa16.59■□□□□ 0.25
GRIA3-208ENST00000620581 TIAM2Q8IVF5 1701 aa16.59■□□□□ 0.25
GRIA3-208ENST00000620581 SBF1O95248 1867 aa16.59■□□□□ 0.25
GRIA3-208ENST00000620581 H0YIN7 160 aa16.59■□□□□ 0.25
GRIA3-208ENST00000620581 RPGRQ92834 1020 aaKnown RBP16.59■□□□□ 0.25
GRIA3-208ENST00000620581 PSMD1Q99460 953 aa16.59■□□□□ 0.25
GRIA3-208ENST00000620581 FOCADQ5VW36 1801 aa16.58■□□□□ 0.25
GRIA3-208ENST00000620581 ATP2B4P23634 1241 aa16.58■□□□□ 0.24
GRIA3-208ENST00000620581 XDHP47989 1333 aa16.58■□□□□ 0.24
GRIA3-208ENST00000620581 KCNA3P22001 575 aa16.58■□□□□ 0.24
GRIA3-208ENST00000620581 R3HDM1Q15032 1099 aaKnown RBP16.58■□□□□ 0.24
GRIA3-208ENST00000620581 C3orf67Q6ZVT6 689 aa16.58■□□□□ 0.24
GRIA3-208ENST00000620581 SUPT20HQ8NEM7 779 aa16.58■□□□□ 0.24
GRIA3-208ENST00000620581 SASH1O94885 1247 aa16.57■□□□□ 0.24
GRIA3-208ENST00000620581 PUM3Q15397 648 aaKnown RBP16.57■□□□□ 0.24
GRIA3-208ENST00000620581 HCLS1P14317 486 aaPredicted RBP16.56■□□□□ 0.24
GRIA3-208ENST00000620581 SALL1Q9NSC2 1324 aa16.56■□□□□ 0.24
GRIA3-208ENST00000620581 PDE8BO95263 885 aa16.56■□□□□ 0.24
GRIA3-208ENST00000620581 NUTM1Q86Y26 1132 aa16.56■□□□□ 0.24
GRIA3-208ENST00000620581 LPIN2Q92539 896 aa16.56■□□□□ 0.24
GRIA3-208ENST00000620581 ARXQ96QS3 562 aa16.56■□□□□ 0.24
GRIA3-208ENST00000620581 EPB41L2O43491 1005 aaKnown RBP16.56■□□□□ 0.24
GRIA3-208ENST00000620581 ARID4AP29374 1257 aaPredicted RBP16.56■□□□□ 0.24
GRIA3-208ENST00000620581 PPEF1O14829 653 aaPredicted RBP16.55■□□□□ 0.24
GRIA3-208ENST00000620581 GTF2E1P29083 439 aaPredicted RBP16.55■□□□□ 0.24
GRIA3-208ENST00000620581 C2CD5Q86YS7 1000 aa16.55■□□□□ 0.24
GRIA3-208ENST00000620581 C1orf115Q9H7X2 142 aa16.55■□□□□ 0.24
GRIA3-208ENST00000620581 ZC3H4Q9UPT8 1303 aaKnown RBP16.55■□□□□ 0.24
GRIA3-208ENST00000620581 TNNI3KQ59H18 835 aa16.55■□□□□ 0.24
GRIA3-208ENST00000620581 GTF3C3Q9Y5Q9 886 aa16.55■□□□□ 0.24
GRIA3-208ENST00000620581 FPGT-TNNI3KV9GXZ4 949 aa16.55■□□□□ 0.24
GRIA3-208ENST00000620581 RTKN2Q8IZC4 609 aa16.54■□□□□ 0.24
GRIA3-208ENST00000620581 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
GRIA3-208ENST00000620581 MINPP1Q9UNW1 487 aa16.54■□□□□ 0.24
GRIA3-208ENST00000620581 SURF6O75683 361 aaKnown RBP16.53■□□□□ 0.24
GRIA3-208ENST00000620581 LAMA4Q16363 1823 aa16.53■□□□□ 0.24
GRIA3-208ENST00000620581 ATP5JP18859 108 aa16.53■□□□□ 0.24
GRIA3-208ENST00000620581 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
GRIA3-208ENST00000620581 GPATCH3Q96I76 525 aa16.53■□□□□ 0.24
GRIA3-208ENST00000620581 CEP126Q9P2H0 1117 aa16.53■□□□□ 0.24
GRIA3-208ENST00000620581 UQCRFS1P1P0C7P4 283 aa16.53■□□□□ 0.24
GRIA3-208ENST00000620581 CLASRPQ8N2M8 674 aaKnown RBP16.53■□□□□ 0.24
GRIA3-208ENST00000620581 IL27Q8NEV9 243 aa16.53■□□□□ 0.24
GRIA3-208ENST00000620581 DDX60LQ5H9U9 1706 aaKnown RBP16.52■□□□□ 0.24
GRIA3-208ENST00000620581 LDHAL6AQ6ZMR3 332 aa16.52■□□□□ 0.24
GRIA3-208ENST00000620581 SUGT1Q9Y2Z0 365 aa16.52■□□□□ 0.24
GRIA3-208ENST00000620581 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.23
GRIA3-208ENST00000620581 MPHOSPH8Q99549 860 aa16.52■□□□□ 0.23
GRIA3-208ENST00000620581 SLC5A1P13866 664 aa16.51■□□□□ 0.23
GRIA3-208ENST00000620581 FBXO33Q7Z6M2 555 aa16.51■□□□□ 0.23
GRIA3-208ENST00000620581 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
GRIA3-208ENST00000620581 BMP2KLQ5H9B9 411 aa16.51■□□□□ 0.23
GRIA3-208ENST00000620581 TTLL6Q8N841 843 aa16.51■□□□□ 0.23
GRIA3-208ENST00000620581 TAOK2Q9UL54 1235 aa16.51■□□□□ 0.23
GRIA3-208ENST00000620581 MSH5O43196 834 aa16.5■□□□□ 0.23
GRIA3-208ENST00000620581 CHRNDQ07001 517 aa16.5■□□□□ 0.23
GRIA3-208ENST00000620581 CELF1Q92879 486 aaKnown RBP16.5■□□□□ 0.23
GRIA3-208ENST00000620581 PIM2Q9P1W9 311 aa16.5■□□□□ 0.23
GRIA3-208ENST00000620581 IL1R1P14778 569 aa16.5■□□□□ 0.23
GRIA3-208ENST00000620581 TAF7LQ5H9L4 462 aa16.5■□□□□ 0.23
GRIA3-208ENST00000620581 EYA3Q99504 573 aa16.5■□□□□ 0.23
GRIA3-208ENST00000620581 FAM205AQ6ZU69 1335 aa16.5■□□□□ 0.23
GRIA3-208ENST00000620581 ERC2O15083 957 aa16.5■□□□□ 0.23
GRIA3-208ENST00000620581 CCDC93Q567U6 631 aa16.5■□□□□ 0.23
GRIA3-208ENST00000620581 MAP4K4O95819 1239 aaPredicted RBP16.49■□□□□ 0.23
GRIA3-208ENST00000620581 PDGFDQ9GZP0 370 aaPredicted RBP16.49■□□□□ 0.23
GRIA3-208ENST00000620581 SEC31BQ9NQW1 1179 aa16.49■□□□□ 0.23
GRIA3-208ENST00000620581 PLEKHM2Q8IWE5 1019 aa16.49■□□□□ 0.23
GRIA3-208ENST00000620581 GLRX3O76003 335 aaKnown RBP16.48■□□□□ 0.23
GRIA3-208ENST00000620581 IFIT1P09914 478 aaKnown RBP16.48■□□□□ 0.23
GRIA3-208ENST00000620581 IRX6P78412 446 aaPredicted RBP16.48■□□□□ 0.23
GRIA3-208ENST00000620581 ATP2B3Q16720 1220 aa16.48■□□□□ 0.23
GRIA3-208ENST00000620581 CNNM1Q9NRU3 951 aa16.48■□□□□ 0.23
GRIA3-208ENST00000620581 PDE4AP27815 886 aa16.48■□□□□ 0.23
GRIA3-208ENST00000620581 TFCP2Q12800 502 aa16.48■□□□□ 0.23
GRIA3-208ENST00000620581 LRRC24Q50LG9 513 aa16.48■□□□□ 0.23
GRIA3-208ENST00000620581 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
GRIA3-208ENST00000620581 ECHDC1Q9NTX5 307 aa16.48■□□□□ 0.23
GRIA3-208ENST00000620581 LAMB1P07942 1786 aa16.48■□□□□ 0.23
GRIA3-208ENST00000620581 PI4K2BQ8TCG2 481 aa16.47■□□□□ 0.23
GRIA3-208ENST00000620581 WDR90Q96KV7 1748 aa16.47■□□□□ 0.23
GRIA3-208ENST00000620581 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
GRIA3-208ENST00000620581 METTL24Q5JXM2 366 aa16.47■□□□□ 0.23
GRIA3-208ENST00000620581 MSL1Q68DK7 614 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms