RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 XAGE3Q8WTP9 111 aa22.19■■□□□ 1.14
POLR2E-208ENST00000591709 CELF1Q92879 486 aaKnown RBP22.19■■□□□ 1.14
POLR2E-208ENST00000591709 POLLQ9UGP5 575 aa22.19■■□□□ 1.14
POLR2E-208ENST00000591709 SPEF2Q9C093 1822 aa22.19■■□□□ 1.14
POLR2E-208ENST00000591709 GPSM2P81274 684 aa22.18■■□□□ 1.14
POLR2E-208ENST00000591709 TCIRG1Q13488 830 aa22.18■■□□□ 1.14
POLR2E-208ENST00000591709 MAPK8IP3Q9UPT6 1336 aa22.17■■□□□ 1.14
POLR2E-208ENST00000591709 ZNF646O15015 1829 aaPredicted RBP22.17■■□□□ 1.14
POLR2E-208ENST00000591709 EYA3Q99504 573 aa22.15■■□□□ 1.14
POLR2E-208ENST00000591709 HDAC9Q9UKV0 1011 aa22.15■■□□□ 1.14
POLR2E-208ENST00000591709 ANGEL2Q5VTE6 544 aaKnown RBP22.14■■□□□ 1.13
POLR2E-208ENST00000591709 REM2Q8IYK8 340 aaPredicted RBP22.13■■□□□ 1.13
POLR2E-208ENST00000591709 TBC1D16Q8TBP0 767 aa22.13■■□□□ 1.13
POLR2E-208ENST00000591709 ZNF296Q8WUU4 475 aaPredicted RBP22.13■■□□□ 1.13
POLR2E-208ENST00000591709 VIL1P09327 827 aaKnown RBP22.12■■□□□ 1.13
POLR2E-208ENST00000591709 PKN2Q16513 984 aaKnown RBP22.12■■□□□ 1.13
POLR2E-208ENST00000591709 FAM89AQ96GI7 184 aa22.12■■□□□ 1.13
POLR2E-208ENST00000591709 RBBP6Q7Z6E9 1792 aaKnown RBP22.12■■□□□ 1.13
POLR2E-208ENST00000591709 TBC1D8O95759 1140 aa22.11■■□□□ 1.13
POLR2E-208ENST00000591709 SF3B3Q15393 1217 aaKnown RBP22.11■■□□□ 1.13
POLR2E-208ENST00000591709 RTL5Q5HYW3 569 aaPredicted RBP22.11■■□□□ 1.13
POLR2E-208ENST00000591709 MOB2Q70IA6 237 aa22.11■■□□□ 1.13
POLR2E-208ENST00000591709 ZNF609O15014 1411 aa22.11■■□□□ 1.13
POLR2E-208ENST00000591709 MYH3P11055 1940 aa22.11■■□□□ 1.13
POLR2E-208ENST00000591709 SCARF1Q14162 830 aa22.1■■□□□ 1.13
POLR2E-208ENST00000591709 SCAF8Q9UPN6 1271 aaKnown RBP22.1■■□□□ 1.13
POLR2E-208ENST00000591709 G3V3G9 751 aa22.09■■□□□ 1.13
POLR2E-208ENST00000591709 UFL1O94874 794 aa22.09■■□□□ 1.13
POLR2E-208ENST00000591709 FKBP1BP68106 108 aa22.09■■□□□ 1.13
POLR2E-208ENST00000591709 RALBP1Q15311 655 aa22.09■■□□□ 1.13
POLR2E-208ENST00000591709 KRT24Q2M2I5 525 aa22.09■■□□□ 1.13
POLR2E-208ENST00000591709 DCAF8Q5TAQ9 597 aa22.09■■□□□ 1.13
POLR2E-208ENST00000591709 ZC3H12CQ9C0D7 883 aaKnown RBP22.09■■□□□ 1.13
POLR2E-208ENST00000591709 ATP5J2-PTCD1G3V325 749 aa22.08■■□□□ 1.13
POLR2E-208ENST00000591709 ZNF280AP59817 542 aaPredicted RBP22.08■■□□□ 1.13
POLR2E-208ENST00000591709 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
POLR2E-208ENST00000591709 LAMB1P07942 1786 aa22.07■■□□□ 1.12
POLR2E-208ENST00000591709 ISCA1Q9BUE6 129 aa22.07■■□□□ 1.12
POLR2E-208ENST00000591709 KIAA0100Q14667 2235 aaKnown RBP22.06■■□□□ 1.12
POLR2E-208ENST00000591709 UBE2Q2LH0YL09 131 aa22.06■■□□□ 1.12
POLR2E-208ENST00000591709 RIPK4P57078 832 aa22.06■■□□□ 1.12
POLR2E-208ENST00000591709 RPS8P62241 208 aaKnown RBP22.06■■□□□ 1.12
POLR2E-208ENST00000591709 RSBN1LQ6PCB5 846 aaPredicted RBP22.06■■□□□ 1.12
POLR2E-208ENST00000591709 PLBD2Q8NHP8 589 aa22.06■■□□□ 1.12
POLR2E-208ENST00000591709 PNNQ9H307 717 aaKnown RBP22.06■■□□□ 1.12
POLR2E-208ENST00000591709 PITPNM2Q9BZ72 1349 aa22.06■■□□□ 1.12
POLR2E-208ENST00000591709 MKRN3Q13064 507 aaKnown RBP22.05■■□□□ 1.12
POLR2E-208ENST00000591709 PRAMEF18Q5VWM3 479 aa22.05■■□□□ 1.12
POLR2E-208ENST00000591709 FBXO46Q6PJ61 603 aaPredicted RBP22.05■■□□□ 1.12
POLR2E-208ENST00000591709 AGBL3Q8NEM8 1001 aa22.05■■□□□ 1.12
POLR2E-208ENST00000591709 MYOZ2Q9NPC6 264 aa22.05■■□□□ 1.12
POLR2E-208ENST00000591709 BABAM1Q9NWV8 329 aa22.05■■□□□ 1.12
POLR2E-208ENST00000591709 ANKIB1Q9P2G1 1089 aa22.05■■□□□ 1.12
POLR2E-208ENST00000591709 MKI67P46013 3256 aaKnown RBP22.05■■□□□ 1.12
POLR2E-208ENST00000591709 ECM29Q5VYK3 1845 aa22.04■■□□□ 1.12
POLR2E-208ENST00000591709 GPR25O00155 361 aa22.04■■□□□ 1.12
POLR2E-208ENST00000591709 IRS4O14654 1257 aaPredicted RBP22.04■■□□□ 1.12
POLR2E-208ENST00000591709 TTLL12Q14166 644 aaPredicted RBP22.04■■□□□ 1.12
POLR2E-208ENST00000591709 GCC1Q96CN9 775 aa22.04■■□□□ 1.12
POLR2E-208ENST00000591709 SEC31BQ9NQW1 1179 aa22.04■■□□□ 1.12
POLR2E-208ENST00000591709 PODXL2Q9NZ53 605 aa22.04■■□□□ 1.12
POLR2E-208ENST00000591709 GGA1Q9UJY5 639 aa22.04■■□□□ 1.12
POLR2E-208ENST00000591709 ANKRD13DQ6ZTN6 518 aa22.03■■□□□ 1.12
POLR2E-208ENST00000591709 USP17L8P0C7I0 530 aa22.02■■□□□ 1.12
POLR2E-208ENST00000591709 HTTP42858 3142 aa22.02■■□□□ 1.12
POLR2E-208ENST00000591709 HDGFL1Q5TGJ6 251 aa22.01■■□□□ 1.11
POLR2E-208ENST00000591709 GMLQ99445 158 aa22.01■■□□□ 1.11
POLR2E-208ENST00000591709 MYBBP1AQ9BQG0 1328 aaKnown RBP22.01■■□□□ 1.11
POLR2E-208ENST00000591709 TM4SF4P48230 202 aa22■■□□□ 1.11
POLR2E-208ENST00000591709 NOM1Q5C9Z4 860 aaKnown RBP22■■□□□ 1.11
POLR2E-208ENST00000591709 CENPFP49454 3210 aa21.99■■□□□ 1.11
POLR2E-208ENST00000591709 FKTNO75072 461 aa21.99■■□□□ 1.11
POLR2E-208ENST00000591709 TMPOP42166 694 aaKnown RBP21.99■■□□□ 1.11
POLR2E-208ENST00000591709 LMOD3Q0VAK6 560 aa21.99■■□□□ 1.11
POLR2E-208ENST00000591709 NBPF9Q3BBW0 867 aa21.99■■□□□ 1.11
POLR2E-208ENST00000591709 R3HDMLQ9H3Y0 253 aa21.99■■□□□ 1.11
POLR2E-208ENST00000591709 ZNF316A6NFI3 1004 aaPredicted RBP21.98■■□□□ 1.11
POLR2E-208ENST00000591709 SREBF2Q12772 1141 aa21.98■■□□□ 1.11
POLR2E-208ENST00000591709 HABP4Q5JVS0 413 aaKnown RBP21.98■■□□□ 1.11
POLR2E-208ENST00000591709 LAS1LQ9Y4W2 734 aaKnown RBP21.98■■□□□ 1.11
POLR2E-208ENST00000591709 USP17L3A6NCW0 530 aa21.97■■□□□ 1.11
POLR2E-208ENST00000591709 USP17L4A6NCW7 530 aa21.97■■□□□ 1.11
POLR2E-208ENST00000591709 USP17L1Q7RTZ2 530 aa21.97■■□□□ 1.11
POLR2E-208ENST00000591709 CCDC85AQ96PX6 553 aaPredicted RBP21.97■■□□□ 1.11
POLR2E-208ENST00000591709 DBF4Q9UBU7 674 aaPredicted RBP21.97■■□□□ 1.11
POLR2E-208ENST00000591709 NF2P35240 595 aa21.96■■□□□ 1.11
POLR2E-208ENST00000591709 XDHP47989 1333 aa21.96■■□□□ 1.11
POLR2E-208ENST00000591709 PRKG1Q13976 671 aa21.95■■□□□ 1.1
POLR2E-208ENST00000591709 NEUROD2Q15784 382 aa21.95■■□□□ 1.1
POLR2E-208ENST00000591709 ZBTB38Q8NAP3 1195 aaPredicted RBP21.95■■□□□ 1.1
POLR2E-208ENST00000591709 MXD3Q9BW11 206 aa21.95■■□□□ 1.1
POLR2E-208ENST00000591709 PRKRIP1Q9H875 184 aaPredicted RBP21.95■■□□□ 1.1
POLR2E-208ENST00000591709 OTOFQ9HC10 1997 aa21.94■■□□□ 1.1
POLR2E-208ENST00000591709 POTEFA5A3E0 1075 aa21.94■■□□□ 1.1
POLR2E-208ENST00000591709 CHL1O00533 1208 aa21.94■■□□□ 1.1
POLR2E-208ENST00000591709 PTPN12Q05209 780 aaKnown RBP21.94■■□□□ 1.1
POLR2E-208ENST00000591709 TRIM28Q13263 835 aaKnown RBP21.94■■□□□ 1.1
POLR2E-208ENST00000591709 CCDC152Q4G0S7 254 aa21.94■■□□□ 1.1
POLR2E-208ENST00000591709 CFHR5Q9BXR6 569 aa21.94■■□□□ 1.1
POLR2E-208ENST00000591709 WNT10BO00744 389 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms