RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 TMC4Q7Z404 712 aa22.01■■□□□ 1.11
DNMT1-215ENST00000588913 CDC5LQ99459 802 aaKnown RBP22.01■■□□□ 1.11
DNMT1-215ENST00000588913 MINPP1Q9UNW1 487 aa22.01■■□□□ 1.11
DNMT1-215ENST00000588913 KLHDC4Q8TBB5 520 aa22■■□□□ 1.11
DNMT1-215ENST00000588913 BSDC1Q9NW68 430 aaPredicted RBP22■■□□□ 1.11
DNMT1-215ENST00000588913 LRRFIP2Q9Y608 721 aaKnown RBP22■■□□□ 1.11
DNMT1-215ENST00000588913 ZNF541Q9H0D2 1346 aa22■■□□□ 1.11
DNMT1-215ENST00000588913 TBC1D16Q8TBP0 767 aa21.99■■□□□ 1.11
DNMT1-215ENST00000588913 ANKRD18BA2A2Z9 1011 aa21.99■■□□□ 1.11
DNMT1-215ENST00000588913 SNAP23O00161 211 aa21.99■■□□□ 1.11
DNMT1-215ENST00000588913 PUS3Q9BZE2 481 aaKnown RBP21.99■■□□□ 1.11
DNMT1-215ENST00000588913 IFIT5Q13325 482 aaKnown RBP21.98■■□□□ 1.11
DNMT1-215ENST00000588913 C20orf194Q5TEA3 1177 aa21.98■■□□□ 1.11
DNMT1-215ENST00000588913 DZIP1LQ8IYY4 767 aaKnown RBP21.98■■□□□ 1.11
DNMT1-215ENST00000588913 PODXL2Q9NZ53 605 aa21.98■■□□□ 1.11
DNMT1-215ENST00000588913 PPIP5K2O43314 1243 aa21.97■■□□□ 1.11
DNMT1-215ENST00000588913 UBTFL1P0CB47 393 aaPredicted RBP21.97■■□□□ 1.11
DNMT1-215ENST00000588913 ANP32AP39687 249 aaKnown RBP21.97■■□□□ 1.11
DNMT1-215ENST00000588913 RFX5P48382 616 aaPredicted RBP21.97■■□□□ 1.11
DNMT1-215ENST00000588913 NMRK2Q9NPI5 230 aa21.97■■□□□ 1.11
DNMT1-215ENST00000588913 SCN9AQ15858 1988 aa21.96■■□□□ 1.11
DNMT1-215ENST00000588913 RIMBP2O15034 1052 aa21.96■■□□□ 1.11
DNMT1-215ENST00000588913 IGHMBP2P38935 993 aaKnown RBP21.96■■□□□ 1.11
DNMT1-215ENST00000588913 RRP1P56182 461 aaKnown RBP21.96■■□□□ 1.11
DNMT1-215ENST00000588913 GRIPAP1Q4V328 841 aa21.96■■□□□ 1.11
DNMT1-215ENST00000588913 LARGE2Q8N3Y3 721 aa21.96■■□□□ 1.11
DNMT1-215ENST00000588913 HELBQ8NG08 1087 aaPredicted RBP21.96■■□□□ 1.11
DNMT1-215ENST00000588913 C6orf229H3BNL8 230 aa21.95■■□□□ 1.1
DNMT1-215ENST00000588913 FZD9O00144 591 aa21.95■■□□□ 1.1
DNMT1-215ENST00000588913 UFL1O94874 794 aa21.95■■□□□ 1.1
DNMT1-215ENST00000588913 KLRK1P26718 216 aa21.95■■□□□ 1.1
DNMT1-215ENST00000588913 KIAA2012Q0VF49 1180 aa21.95■■□□□ 1.1
DNMT1-215ENST00000588913 ANKIB1Q9P2G1 1089 aa21.95■■□□□ 1.1
DNMT1-215ENST00000588913 NOP58Q9Y2X3 529 aaKnown RBP21.95■■□□□ 1.1
DNMT1-215ENST00000588913 YDJCA8MPS7 323 aa21.94■■□□□ 1.1
DNMT1-215ENST00000588913 TAF5LO75529 589 aa21.94■■□□□ 1.1
DNMT1-215ENST00000588913 DDNO94850 711 aaPredicted RBP21.94■■□□□ 1.1
DNMT1-215ENST00000588913 CHRNDQ07001 517 aa21.94■■□□□ 1.1
DNMT1-215ENST00000588913 CCDC57Q2TAC2 916 aa21.94■■□□□ 1.1
DNMT1-215ENST00000588913 LRRC24Q50LG9 513 aa21.94■■□□□ 1.1
DNMT1-215ENST00000588913 TMX4Q9H1E5 349 aaPredicted RBP21.94■■□□□ 1.1
DNMT1-215ENST00000588913 XDHP47989 1333 aa21.94■■□□□ 1.1
DNMT1-215ENST00000588913 ZC3H4Q9UPT8 1303 aaKnown RBP21.94■■□□□ 1.1
DNMT1-215ENST00000588913 POTECB2RU33 542 aa21.94■■□□□ 1.1
DNMT1-215ENST00000588913 TXNRD3Q86VQ6 643 aa21.94■■□□□ 1.1
DNMT1-215ENST00000588913 FTSJ3Q8IY81 847 aaKnown RBP21.94■■□□□ 1.1
DNMT1-215ENST00000588913 MPHOSPH8Q99549 860 aa21.94■■□□□ 1.1
DNMT1-215ENST00000588913 C1orf115Q9H7X2 142 aa21.94■■□□□ 1.1
DNMT1-215ENST00000588913 GLTPD2A6NH11 291 aa21.93■■□□□ 1.1
DNMT1-215ENST00000588913 ITPRIPQ8IWB1 547 aa21.93■■□□□ 1.1
DNMT1-215ENST00000588913 KCNQ5Q9NR82 932 aa21.93■■□□□ 1.1
DNMT1-215ENST00000588913 GGA1Q9UJY5 639 aa21.93■■□□□ 1.1
DNMT1-215ENST00000588913 WDR90Q96KV7 1748 aa21.93■■□□□ 1.1
DNMT1-215ENST00000588913 ZNF646O15015 1829 aaPredicted RBP21.93■■□□□ 1.1
DNMT1-215ENST00000588913 ZBTB7BO15156 539 aaPredicted RBP21.92■■□□□ 1.1
DNMT1-215ENST00000588913 DOK7Q18PE1 504 aa21.92■■□□□ 1.1
DNMT1-215ENST00000588913 SUPT20HQ8NEM7 779 aa21.92■■□□□ 1.1
DNMT1-215ENST00000588913 DBNDD1Q9H9R9 158 aa21.92■■□□□ 1.1
DNMT1-215ENST00000588913 IRS2Q9Y4H2 1338 aa21.92■■□□□ 1.1
DNMT1-215ENST00000588913 KIF3CO14782 793 aa21.92■■□□□ 1.1
DNMT1-215ENST00000588913 PTPN12Q05209 780 aaKnown RBP21.92■■□□□ 1.1
DNMT1-215ENST00000588913 WASHC4Q2M389 1173 aa21.92■■□□□ 1.1
DNMT1-215ENST00000588913 LDHAL6AQ6ZMR3 332 aa21.92■■□□□ 1.1
DNMT1-215ENST00000588913 GPBP1L1Q9HC44 474 aaPredicted RBP21.92■■□□□ 1.1
DNMT1-215ENST00000588913 PA2G4Q9UQ80 394 aaKnown RBP21.91■■□□□ 1.1
DNMT1-215ENST00000588913 RIPOR2Q9Y4F9 1068 aa21.91■■□□□ 1.1
DNMT1-215ENST00000588913 GNAI3P08754 354 aa21.9■■□□□ 1.1
DNMT1-215ENST00000588913 RRAGCQ9HB90 399 aa21.9■■□□□ 1.1
DNMT1-215ENST00000588913 COG6Q9Y2V7 657 aa21.9■■□□□ 1.1
DNMT1-215ENST00000588913 MS4A1P11836 297 aa21.89■■□□□ 1.1
DNMT1-215ENST00000588913 TAF7LQ5H9L4 462 aa21.89■■□□□ 1.1
DNMT1-215ENST00000588913 NIM1KQ8IY84 436 aa21.89■■□□□ 1.1
DNMT1-215ENST00000588913 JDP2Q8WYK2 163 aa21.89■■□□□ 1.1
DNMT1-215ENST00000588913 ATP2B4P23634 1241 aa21.89■■□□□ 1.09
DNMT1-215ENST00000588913 CXCL9Q07325 125 aa21.89■■□□□ 1.09
DNMT1-215ENST00000588913 CNNM1Q9NRU3 951 aa21.89■■□□□ 1.09
DNMT1-215ENST00000588913 PNMA6EA0A0J9YXQ4 647 aa21.88■■□□□ 1.09
DNMT1-215ENST00000588913 IPO9Q96P70 1041 aaKnown RBP21.88■■□□□ 1.09
DNMT1-215ENST00000588913 VPS33BQ9H267 617 aa21.88■■□□□ 1.09
DNMT1-215ENST00000588913 RAD17O75943 681 aa21.87■■□□□ 1.09
DNMT1-215ENST00000588913 ATG9AQ7Z3C6 839 aa21.87■■□□□ 1.09
DNMT1-215ENST00000588913 ZNRF3Q9ULT6 936 aa21.87■■□□□ 1.09
DNMT1-215ENST00000588913 PSME4Q14997 1843 aa21.87■■□□□ 1.09
DNMT1-215ENST00000588913 ZNF804BA4D1E1 1349 aa21.87■■□□□ 1.09
DNMT1-215ENST00000588913 ECE2O60344 883 aa21.87■■□□□ 1.09
DNMT1-215ENST00000588913 GNAI2P04899 355 aa21.87■■□□□ 1.09
DNMT1-215ENST00000588913 VGLL2Q8N8G2 317 aa21.87■■□□□ 1.09
DNMT1-215ENST00000588913 SIL1Q9H173 461 aa21.87■■□□□ 1.09
DNMT1-215ENST00000588913 MED23Q9ULK4 1368 aa21.86■■□□□ 1.09
DNMT1-215ENST00000588913 MTX1Q13505 466 aa21.86■■□□□ 1.09
DNMT1-215ENST00000588913 MVPQ14764 893 aaKnown RBP21.86■■□□□ 1.09
DNMT1-215ENST00000588913 ANKRD2Q9GZV1 360 aa21.86■■□□□ 1.09
DNMT1-215ENST00000588913 GJA3Q9Y6H8 435 aa21.86■■□□□ 1.09
DNMT1-215ENST00000588913 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.86■■□□□ 1.09
DNMT1-215ENST00000588913 KDM2BQ8NHM5 1336 aa21.86■■□□□ 1.09
DNMT1-215ENST00000588913 EYA3Q99504 573 aa21.85■■□□□ 1.09
DNMT1-215ENST00000588913 ZC3H12CQ9C0D7 883 aaKnown RBP21.85■■□□□ 1.09
DNMT1-215ENST00000588913 LEMD3Q9Y2U8 911 aa21.85■■□□□ 1.09
DNMT1-215ENST00000588913 SHTN1A0MZ66 631 aa21.84■■□□□ 1.09
DNMT1-215ENST00000588913 EYA2O00167 538 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms