RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 FRAT1Q92837 279 aaPredicted RBP21.3■■□□□ 1
TSEN54-211ENST00000583818 BSDC1Q9NW68 430 aaPredicted RBP21.3■■□□□ 1
TSEN54-211ENST00000583818 MINPP1Q9UNW1 487 aa21.3■■□□□ 1
TSEN54-211ENST00000583818 ANKRD18BA2A2Z9 1011 aa21.29■■□□□ 1
TSEN54-211ENST00000583818 YDJCA8MPS7 323 aa21.29■■□□□ 1
TSEN54-211ENST00000583818 RAD17O75943 681 aa21.29■■□□□ 1
TSEN54-211ENST00000583818 POTEIP0CG38 1075 aa21.29■■□□□ 1
TSEN54-211ENST00000583818 POTEJP0CG39 1038 aa21.29■■□□□ 1
TSEN54-211ENST00000583818 BRPF1P55201 1214 aaPredicted RBP21.29■■□□□ 1
TSEN54-211ENST00000583818 USP44Q9H0E7 712 aa21.29■■□□□ 1
TSEN54-211ENST00000583818 PODXL2Q9NZ53 605 aa21.29■■□□□ 1
TSEN54-211ENST00000583818 GGA1Q9UJY5 639 aa21.29■■□□□ 1
TSEN54-211ENST00000583818 ZNRF3Q9ULT6 936 aa21.29■■□□□ 1
TSEN54-211ENST00000583818 UTYO14607 1347 aa21.29■■□□□ 1
TSEN54-211ENST00000583818 CXCL9Q07325 125 aa21.28■■□□□ 1
TSEN54-211ENST00000583818 IFIT5Q13325 482 aaKnown RBP21.28■■□□□ 1
TSEN54-211ENST00000583818 GPC2Q8N158 579 aa21.28■■□□□ 1
TSEN54-211ENST00000583818 L3MBTL3Q96JM7 780 aaPredicted RBP21.28■■□□□ 1
TSEN54-211ENST00000583818 API5Q9BZZ5 524 aaKnown RBP21.28■■□□□ 1
TSEN54-211ENST00000583818 VPS33BQ9H267 617 aa21.28■■□□□ 1
TSEN54-211ENST00000583818 BICC1Q9H694 974 aaKnown RBP21.28■■□□□ 1
TSEN54-211ENST00000583818 XDHP47989 1333 aa21.28■■□□□ 1
TSEN54-211ENST00000583818 KIF16BQ96L93 1317 aa21.28■■□□□ 1
TSEN54-211ENST00000583818 MPHOSPH8Q99549 860 aa21.27■■□□□ 1
TSEN54-211ENST00000583818 KCNQ5Q9NR82 932 aa21.27■■□□□ 1
TSEN54-211ENST00000583818 ANKRD44Q8N8A2 993 aa21.26■□□□□ 0.99
TSEN54-211ENST00000583818 RBM46Q8TBY0 533 aaKnown RBP21.26■□□□□ 0.99
TSEN54-211ENST00000583818 CLUAP1Q96AJ1 413 aa21.26■□□□□ 0.99
TSEN54-211ENST00000583818 EYA3Q99504 573 aa21.26■□□□□ 0.99
TSEN54-211ENST00000583818 SNAP23O00161 211 aa21.25■□□□□ 0.99
TSEN54-211ENST00000583818 ECE2O60344 883 aa21.25■□□□□ 0.99
TSEN54-211ENST00000583818 CCT4P50991 539 aaKnown RBP21.25■□□□□ 0.99
TSEN54-211ENST00000583818 CCDC57Q2TAC2 916 aa21.25■□□□□ 0.99
TSEN54-211ENST00000583818 HELBQ8NG08 1087 aaPredicted RBP21.25■□□□□ 0.99
TSEN54-211ENST00000583818 ZC3H12CQ9C0D7 883 aaKnown RBP21.25■□□□□ 0.99
TSEN54-211ENST00000583818 TAF1DQ9H5J8 278 aaPredicted RBP21.25■□□□□ 0.99
TSEN54-211ENST00000583818 TRIM27P14373 513 aa21.24■□□□□ 0.99
TSEN54-211ENST00000583818 ATP2B4P23634 1241 aa21.24■□□□□ 0.99
TSEN54-211ENST00000583818 SCNN1DP51172 638 aa21.24■□□□□ 0.99
TSEN54-211ENST00000583818 CHRNDQ07001 517 aa21.24■□□□□ 0.99
TSEN54-211ENST00000583818 EAPPQ56P03 285 aaPredicted RBP21.24■□□□□ 0.99
TSEN54-211ENST00000583818 TAF7LQ5H9L4 462 aa21.24■□□□□ 0.99
TSEN54-211ENST00000583818 HACL1Q9UJ83 578 aa21.24■□□□□ 0.99
TSEN54-211ENST00000583818 SCN4AP35499 1836 aa21.24■□□□□ 0.99
TSEN54-211ENST00000583818 IQCA1LA6NCM1 817 aa21.23■□□□□ 0.99
TSEN54-211ENST00000583818 TAF5LO75529 589 aa21.23■□□□□ 0.99
TSEN54-211ENST00000583818 KLRK1P26718 216 aa21.23■□□□□ 0.99
TSEN54-211ENST00000583818 EPS15P42566 896 aa21.23■□□□□ 0.99
TSEN54-211ENST00000583818 CIAPIN1Q6FI81 312 aa21.23■□□□□ 0.99
TSEN54-211ENST00000583818 SCN9AQ15858 1988 aa21.23■□□□□ 0.99
TSEN54-211ENST00000583818 EPHX2P34913 555 aa21.22■□□□□ 0.99
TSEN54-211ENST00000583818 GMPSP49915 693 aaPredicted RBP21.22■□□□□ 0.99
TSEN54-211ENST00000583818 ATF7IPQ6VMQ6 1270 aa21.22■□□□□ 0.99
TSEN54-211ENST00000583818 TXNRD3Q86VQ6 643 aa21.22■□□□□ 0.99
TSEN54-211ENST00000583818 ARHGAP45Q92619 1136 aa21.22■□□□□ 0.99
TSEN54-211ENST00000583818 MEIS3Q99687 375 aa21.22■□□□□ 0.99
TSEN54-211ENST00000583818 PUS3Q9BZE2 481 aaKnown RBP21.22■□□□□ 0.99
TSEN54-211ENST00000583818 A0A1B0GUL6 1792 aa21.22■□□□□ 0.99
TSEN54-211ENST00000583818 CEP350Q5VT06 3117 aa21.21■□□□□ 0.99
TSEN54-211ENST00000583818 SHTN1A0MZ66 631 aa21.21■□□□□ 0.99
TSEN54-211ENST00000583818 G3V3G9 751 aa21.21■□□□□ 0.99
TSEN54-211ENST00000583818 PSMD14O00487 310 aa21.21■□□□□ 0.99
TSEN54-211ENST00000583818 PLIN1O60240 522 aa21.21■□□□□ 0.99
TSEN54-211ENST00000583818 RABL6Q3YEC7 729 aaPredicted RBP21.21■□□□□ 0.99
TSEN54-211ENST00000583818 DCAF8Q5TAQ9 597 aa21.21■□□□□ 0.99
TSEN54-211ENST00000583818 LDHAL6AQ6ZMR3 332 aa21.21■□□□□ 0.99
TSEN54-211ENST00000583818 SMC1BQ8NDV3 1235 aa21.21■□□□□ 0.99
TSEN54-211ENST00000583818 KLHDC4Q8TBB5 520 aa21.21■□□□□ 0.99
TSEN54-211ENST00000583818 ZBTB12Q9Y330 459 aaPredicted RBP21.21■□□□□ 0.99
TSEN54-211ENST00000583818 UBTFL1P0CB47 393 aaPredicted RBP21.2■□□□□ 0.98
TSEN54-211ENST00000583818 LMOD1P29536 600 aaPredicted RBP21.2■□□□□ 0.98
TSEN54-211ENST00000583818 CNNM1Q9NRU3 951 aa21.2■□□□□ 0.98
TSEN54-211ENST00000583818 ZNF804BA4D1E1 1349 aa21.2■□□□□ 0.98
TSEN54-211ENST00000583818 IPO8O15397 1037 aaKnown RBP21.19■□□□□ 0.98
TSEN54-211ENST00000583818 HSPA6P17066 643 aa21.19■□□□□ 0.98
TSEN54-211ENST00000583818 KCNJ4P48050 445 aa21.19■□□□□ 0.98
TSEN54-211ENST00000583818 TNIP1Q15025 636 aa21.19■□□□□ 0.98
TSEN54-211ENST00000583818 INTS3Q68E01 1043 aaKnown RBP21.19■□□□□ 0.98
TSEN54-211ENST00000583818 ANKRD2Q9GZV1 360 aa21.19■□□□□ 0.98
TSEN54-211ENST00000583818 LRRFIP2Q9Y608 721 aaKnown RBP21.19■□□□□ 0.98
TSEN54-211ENST00000583818 FSTL1Q12841 308 aa21.18■□□□□ 0.98
TSEN54-211ENST00000583818 ZKSCAN2Q63HK3 967 aa21.18■□□□□ 0.98
TSEN54-211ENST00000583818 GPRC5DQ9NZD1 345 aa21.18■□□□□ 0.98
TSEN54-211ENST00000583818 CLEC11AQ9Y240 323 aa21.18■□□□□ 0.98
TSEN54-211ENST00000583818 MED23Q9ULK4 1368 aa21.18■□□□□ 0.98
TSEN54-211ENST00000583818 HTRA3P83110 453 aa21.17■□□□□ 0.98
TSEN54-211ENST00000583818 LRRC24Q50LG9 513 aa21.17■□□□□ 0.98
TSEN54-211ENST00000583818 TMEM57Q8N5G2 664 aa21.17■□□□□ 0.98
TSEN54-211ENST00000583818 LEMD3Q9Y2U8 911 aa21.17■□□□□ 0.98
TSEN54-211ENST00000583818 CHADLQ6NUI6 762 aa21.16■□□□□ 0.98
TSEN54-211ENST00000583818 ADAMTSL1Q8N6G6 1762 aa21.15■□□□□ 0.98
TSEN54-211ENST00000583818 LDHDQ86WU2 507 aa21.15■□□□□ 0.98
TSEN54-211ENST00000583818 FBXW7Q969H0 707 aa21.15■□□□□ 0.98
TSEN54-211ENST00000583818 YTHDC1Q96MU7 727 aaKnown RBP21.15■□□□□ 0.98
TSEN54-211ENST00000583818 RLBP1P12271 317 aa21.14■□□□□ 0.97
TSEN54-211ENST00000583818 RFX5P48382 616 aaPredicted RBP21.14■□□□□ 0.97
TSEN54-211ENST00000583818 MAP1SQ66K74 1059 aaPredicted RBP21.14■□□□□ 0.97
TSEN54-211ENST00000583818 MXD3Q9BW11 206 aa21.14■□□□□ 0.97
TSEN54-211ENST00000583818 RIPOR2Q9Y4F9 1068 aa21.14■□□□□ 0.97
TSEN54-211ENST00000583818 IRS2Q9Y4H2 1338 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms