RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 LMBR1LQ6UX01 489 aa19.9■□□□□ 0.78
CHD3-215ENST00000572750 TMC4Q7Z404 712 aa19.9■□□□□ 0.78
CHD3-215ENST00000572750 SP8Q8IXZ3 490 aa19.9■□□□□ 0.78
CHD3-215ENST00000572750 CDC5LQ99459 802 aaKnown RBP19.9■□□□□ 0.78
CHD3-215ENST00000572750 TMX4Q9H1E5 349 aaPredicted RBP19.9■□□□□ 0.78
CHD3-215ENST00000572750 BICC1Q9H694 974 aaKnown RBP19.9■□□□□ 0.78
CHD3-215ENST00000572750 ZNF277Q9NRM2 450 aaPredicted RBP19.9■□□□□ 0.78
CHD3-215ENST00000572750 ANKRD18AQ8IVF6 992 aa19.89■□□□□ 0.77
CHD3-215ENST00000572750 FTSJ3Q8IY81 847 aaKnown RBP19.89■□□□□ 0.77
CHD3-215ENST00000572750 ABHD8Q96I13 439 aa19.89■□□□□ 0.77
CHD3-215ENST00000572750 PSMD1Q99460 953 aa19.89■□□□□ 0.77
CHD3-215ENST00000572750 CNTNAP1P78357 1384 aa19.88■□□□□ 0.77
CHD3-215ENST00000572750 POTEIP0CG38 1075 aa19.88■□□□□ 0.77
CHD3-215ENST00000572750 POTEJP0CG39 1038 aa19.88■□□□□ 0.77
CHD3-215ENST00000572750 TMEM57Q8N5G2 664 aa19.88■□□□□ 0.77
CHD3-215ENST00000572750 MEIS3Q99687 375 aa19.88■□□□□ 0.77
CHD3-215ENST00000572750 UBTFL1P0CB47 393 aaPredicted RBP19.87■□□□□ 0.77
CHD3-215ENST00000572750 RLBP1P12271 317 aa19.87■□□□□ 0.77
CHD3-215ENST00000572750 DPP8Q6V1X1 898 aaPredicted RBP19.87■□□□□ 0.77
CHD3-215ENST00000572750 ANKRD44Q8N8A2 993 aa19.87■□□□□ 0.77
CHD3-215ENST00000572750 ANKRD18BA2A2Z9 1011 aa19.86■□□□□ 0.77
CHD3-215ENST00000572750 CTCFP49711 727 aaPredicted RBP19.86■□□□□ 0.77
CHD3-215ENST00000572750 LBX1P52954 281 aa19.86■□□□□ 0.77
CHD3-215ENST00000572750 GPSM2P81274 684 aa19.86■□□□□ 0.77
CHD3-215ENST00000572750 IFIT5Q13325 482 aaKnown RBP19.86■□□□□ 0.77
CHD3-215ENST00000572750 GRIPAP1Q4V328 841 aa19.86■□□□□ 0.77
CHD3-215ENST00000572750 DZIP1LQ8IYY4 767 aaKnown RBP19.86■□□□□ 0.77
CHD3-215ENST00000572750 MPNDQ8N594 471 aa19.86■□□□□ 0.77
CHD3-215ENST00000572750 IGHMBP2P38935 993 aaKnown RBP19.85■□□□□ 0.77
CHD3-215ENST00000572750 IARSP41252 1262 aaKnown RBP19.85■□□□□ 0.77
CHD3-215ENST00000572750 RABL6Q3YEC7 729 aaPredicted RBP19.85■□□□□ 0.77
CHD3-215ENST00000572750 PLIN1O60240 522 aa19.84■□□□□ 0.77
CHD3-215ENST00000572750 CCDC57Q2TAC2 916 aa19.84■□□□□ 0.77
CHD3-215ENST00000572750 PANK1Q8TE04 598 aa19.84■□□□□ 0.77
CHD3-215ENST00000572750 ZNF594Q96JF6 807 aaPredicted RBP19.84■□□□□ 0.77
CHD3-215ENST00000572750 WBP1LQ9NX94 342 aa19.84■□□□□ 0.77
CHD3-215ENST00000572750 NSFL1CQ9UNZ2 370 aaKnown RBP19.84■□□□□ 0.77
CHD3-215ENST00000572750 LRRFIP2Q9Y608 721 aaKnown RBP19.84■□□□□ 0.77
CHD3-215ENST00000572750 VEGFBP49765 207 aa19.83■□□□□ 0.77
CHD3-215ENST00000572750 AOC3Q16853 763 aa19.83■□□□□ 0.77
CHD3-215ENST00000572750 ITPRIPQ8IWB1 547 aa19.83■□□□□ 0.77
CHD3-215ENST00000572750 GPR101Q96P66 508 aaPredicted RBP19.83■□□□□ 0.77
CHD3-215ENST00000572750 RTFDC1Q9BY42 306 aaPredicted RBP19.83■□□□□ 0.77
CHD3-215ENST00000572750 BSDC1Q9NW68 430 aaPredicted RBP19.83■□□□□ 0.77
CHD3-215ENST00000572750 ANKIB1Q9P2G1 1089 aa19.83■□□□□ 0.77
CHD3-215ENST00000572750 PPIP5K2O43314 1243 aa19.82■□□□□ 0.76
CHD3-215ENST00000572750 TAF7LQ5H9L4 462 aa19.82■□□□□ 0.76
CHD3-215ENST00000572750 MPHOSPH8Q99549 860 aa19.82■□□□□ 0.76
CHD3-215ENST00000572750 XDHP47989 1333 aa19.81■□□□□ 0.76
CHD3-215ENST00000572750 UFL1O94874 794 aa19.81■□□□□ 0.76
CHD3-215ENST00000572750 RGS19P49795 217 aa19.81■□□□□ 0.76
CHD3-215ENST00000572750 CHADLQ6NUI6 762 aa19.81■□□□□ 0.76
CHD3-215ENST00000572750 LARGE2Q8N3Y3 721 aa19.81■□□□□ 0.76
CHD3-215ENST00000572750 SUPT20HQ8NEM7 779 aa19.81■□□□□ 0.76
CHD3-215ENST00000572750 POLLQ9UGP5 575 aa19.81■□□□□ 0.76
CHD3-215ENST00000572750 MINPP1Q9UNW1 487 aa19.81■□□□□ 0.76
CHD3-215ENST00000572750 C6orf229H3BNL8 230 aa19.8■□□□□ 0.76
CHD3-215ENST00000572750 GNAI3P08754 354 aa19.8■□□□□ 0.76
CHD3-215ENST00000572750 HSPA8P11142 646 aaKnown RBP19.8■□□□□ 0.76
CHD3-215ENST00000572750 MLLT1Q03111 559 aaPredicted RBP19.8■□□□□ 0.76
CHD3-215ENST00000572750 TBC1D16Q8TBP0 767 aa19.8■□□□□ 0.76
CHD3-215ENST00000572750 PODXL2Q9NZ53 605 aa19.8■□□□□ 0.76
CHD3-215ENST00000572750 PASKQ96RG2 1323 aa19.79■□□□□ 0.76
CHD3-215ENST00000572750 ZNF541Q9H0D2 1346 aa19.79■□□□□ 0.76
CHD3-215ENST00000572750 KLHDC4Q8TBB5 520 aa19.79■□□□□ 0.76
CHD3-215ENST00000572750 GGA1Q9UJY5 639 aa19.79■□□□□ 0.76
CHD3-215ENST00000572750 WTIPA6NIX2 430 aaPredicted RBP19.78■□□□□ 0.76
CHD3-215ENST00000572750 CHRNDQ07001 517 aa19.78■□□□□ 0.76
CHD3-215ENST00000572750 KIAA2012Q0VF49 1180 aa19.78■□□□□ 0.76
CHD3-215ENST00000572750 JDP2Q8WYK2 163 aa19.78■□□□□ 0.76
CHD3-215ENST00000572750 AIDAQ96BJ3 306 aa19.78■□□□□ 0.76
CHD3-215ENST00000572750 CNNM1Q9NRU3 951 aa19.78■□□□□ 0.76
CHD3-215ENST00000572750 RIMBP2O15034 1052 aa19.77■□□□□ 0.76
CHD3-215ENST00000572750 LDHAL6AQ6ZMR3 332 aa19.77■□□□□ 0.76
CHD3-215ENST00000572750 NIM1KQ8IY84 436 aa19.77■□□□□ 0.76
CHD3-215ENST00000572750 PUS3Q9BZE2 481 aaKnown RBP19.77■□□□□ 0.76
CHD3-215ENST00000572750 C1orf115Q9H7X2 142 aa19.77■□□□□ 0.76
CHD3-215ENST00000572750 GNAI2P04899 355 aa19.76■□□□□ 0.75
CHD3-215ENST00000572750 WASHC4Q2M389 1173 aa19.76■□□□□ 0.75
CHD3-215ENST00000572750 C20orf194Q5TEA3 1177 aa19.76■□□□□ 0.75
CHD3-215ENST00000572750 HDAC5Q9UQL6 1122 aa19.76■□□□□ 0.75
CHD3-215ENST00000572750 SCN9AQ15858 1988 aa19.75■□□□□ 0.75
CHD3-215ENST00000572750 FZD9O00144 591 aa19.75■□□□□ 0.75
CHD3-215ENST00000572750 MS4A1P11836 297 aa19.75■□□□□ 0.75
CHD3-215ENST00000572750 RFX5P48382 616 aaPredicted RBP19.75■□□□□ 0.75
CHD3-215ENST00000572750 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.75■□□□□ 0.75
CHD3-215ENST00000572750 HELBQ8NG08 1087 aaPredicted RBP19.75■□□□□ 0.75
CHD3-215ENST00000572750 EYA3Q99504 573 aa19.75■□□□□ 0.75
CHD3-215ENST00000572750 VPS33BQ9H267 617 aa19.75■□□□□ 0.75
CHD3-215ENST00000572750 COG6Q9Y2V7 657 aa19.75■□□□□ 0.75
CHD3-215ENST00000572750 MED23Q9ULK4 1368 aa19.74■□□□□ 0.75
CHD3-215ENST00000572750 CCDC85CA6NKD9 419 aa19.74■□□□□ 0.75
CHD3-215ENST00000572750 TAF5LO75529 589 aa19.74■□□□□ 0.75
CHD3-215ENST00000572750 ATP2B4P23634 1241 aa19.74■□□□□ 0.75
CHD3-215ENST00000572750 KLRK1P26718 216 aa19.74■□□□□ 0.75
CHD3-215ENST00000572750 MVPQ14764 893 aaKnown RBP19.74■□□□□ 0.75
CHD3-215ENST00000572750 LRRC24Q50LG9 513 aa19.74■□□□□ 0.75
CHD3-215ENST00000572750 ANKRD2Q9GZV1 360 aa19.74■□□□□ 0.75
CHD3-215ENST00000572750 DBNDD1Q9H9R9 158 aa19.74■□□□□ 0.75
CHD3-215ENST00000572750 PSME4Q14997 1843 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms