RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 DCPSQ96C86 337 aaKnown RBP20.51■□□□□ 0.87
AC243562.3-201ENST00000559866 FAM89AQ96GI7 184 aa20.51■□□□□ 0.87
AC243562.3-201ENST00000559866 SPEF2Q9C093 1822 aa20.5■□□□□ 0.87
AC243562.3-201ENST00000559866 RPS12P25398 132 aaKnown RBP20.49■□□□□ 0.87
AC243562.3-201ENST00000559866 SF3B3Q15393 1217 aaKnown RBP20.49■□□□□ 0.87
AC243562.3-201ENST00000559866 RTL5Q5HYW3 569 aaPredicted RBP20.49■□□□□ 0.87
AC243562.3-201ENST00000559866 TBC1D16Q8TBP0 767 aa20.49■□□□□ 0.87
AC243562.3-201ENST00000559866 ISCA1Q9BUE6 129 aa20.49■□□□□ 0.87
AC243562.3-201ENST00000559866 CHPF2Q9P2E5 772 aa20.49■□□□□ 0.87
AC243562.3-201ENST00000559866 SCAF8Q9UPN6 1271 aaKnown RBP20.49■□□□□ 0.87
AC243562.3-201ENST00000559866 ATP5J2-PTCD1G3V325 749 aa20.48■□□□□ 0.87
AC243562.3-201ENST00000559866 RIPK4P57078 832 aa20.48■□□□□ 0.87
AC243562.3-201ENST00000559866 MOB2Q70IA6 237 aa20.48■□□□□ 0.87
AC243562.3-201ENST00000559866 CTU1Q7Z7A3 348 aaKnown RBP20.48■□□□□ 0.87
AC243562.3-201ENST00000559866 ZNF609O15014 1411 aa20.47■□□□□ 0.87
AC243562.3-201ENST00000559866 HPS5Q9UPZ3 1129 aa20.47■□□□□ 0.87
AC243562.3-201ENST00000559866 VIL1P09327 827 aaKnown RBP20.46■□□□□ 0.87
AC243562.3-201ENST00000559866 ANGEL2Q5VTE6 544 aaKnown RBP20.46■□□□□ 0.87
AC243562.3-201ENST00000559866 PRPF38BQ5VTL8 546 aaKnown RBP20.46■□□□□ 0.87
AC243562.3-201ENST00000559866 SULF1Q8IWU6 871 aa20.46■□□□□ 0.87
AC243562.3-201ENST00000559866 PLBD2Q8NHP8 589 aa20.45■□□□□ 0.86
AC243562.3-201ENST00000559866 SEC31BQ9NQW1 1179 aa20.45■□□□□ 0.86
AC243562.3-201ENST00000559866 BABAM1Q9NWV8 329 aa20.44■□□□□ 0.86
AC243562.3-201ENST00000559866 TMPOP42166 694 aaKnown RBP20.43■□□□□ 0.86
AC243562.3-201ENST00000559866 ZNF280AP59817 542 aaPredicted RBP20.43■□□□□ 0.86
AC243562.3-201ENST00000559866 SCARF1Q14162 830 aa20.43■□□□□ 0.86
AC243562.3-201ENST00000559866 EYA3Q99504 573 aa20.43■□□□□ 0.86
AC243562.3-201ENST00000559866 TBC1D8O95759 1140 aa20.42■□□□□ 0.86
AC243562.3-201ENST00000559866 ZNF296Q8WUU4 475 aaPredicted RBP20.42■□□□□ 0.86
AC243562.3-201ENST00000559866 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
AC243562.3-201ENST00000559866 IRS4O14654 1257 aaPredicted RBP20.41■□□□□ 0.86
AC243562.3-201ENST00000559866 UFL1O94874 794 aa20.41■□□□□ 0.86
AC243562.3-201ENST00000559866 RPS8P62241 208 aaKnown RBP20.41■□□□□ 0.86
AC243562.3-201ENST00000559866 PRAMEF18Q5VWM3 479 aa20.41■□□□□ 0.86
AC243562.3-201ENST00000559866 RSBN1LQ6PCB5 846 aaPredicted RBP20.41■□□□□ 0.86
AC243562.3-201ENST00000559866 ANKRD13DQ6ZTN6 518 aa20.41■□□□□ 0.86
AC243562.3-201ENST00000559866 GMLQ99445 158 aa20.41■□□□□ 0.86
AC243562.3-201ENST00000559866 PODXL2Q9NZ53 605 aa20.41■□□□□ 0.86
AC243562.3-201ENST00000559866 WTIPA6NIX2 430 aaPredicted RBP20.4■□□□□ 0.86
AC243562.3-201ENST00000559866 CHL1O00533 1208 aa20.4■□□□□ 0.86
AC243562.3-201ENST00000559866 LAMB1P07942 1786 aa20.4■□□□□ 0.86
AC243562.3-201ENST00000559866 ZC3H12CQ9C0D7 883 aaKnown RBP20.4■□□□□ 0.86
AC243562.3-201ENST00000559866 HTTP42858 3142 aa20.4■□□□□ 0.86
AC243562.3-201ENST00000559866 UBE2Q2LH0YL09 131 aa20.39■□□□□ 0.85
AC243562.3-201ENST00000559866 HDGFL1Q5TGJ6 251 aa20.39■□□□□ 0.85
AC243562.3-201ENST00000559866 NEUROD2Q15784 382 aa20.38■□□□□ 0.85
AC243562.3-201ENST00000559866 CCDC146Q8IYE0 955 aa20.38■□□□□ 0.85
AC243562.3-201ENST00000559866 MYOZ2Q9NPC6 264 aa20.38■□□□□ 0.85
AC243562.3-201ENST00000559866 TRIM35Q9UPQ4 493 aa20.38■□□□□ 0.85
AC243562.3-201ENST00000559866 LAS1LQ9Y4W2 734 aaKnown RBP20.38■□□□□ 0.85
AC243562.3-201ENST00000559866 MKRN3Q13064 507 aaKnown RBP20.37■□□□□ 0.85
AC243562.3-201ENST00000559866 AGBL3Q8NEM8 1001 aa20.37■□□□□ 0.85
AC243562.3-201ENST00000559866 JARID2Q92833 1246 aaPredicted RBP20.37■□□□□ 0.85
AC243562.3-201ENST00000559866 CCDC85AQ96PX6 553 aaPredicted RBP20.37■□□□□ 0.85
AC243562.3-201ENST00000559866 MXD3Q9BW11 206 aa20.37■□□□□ 0.85
AC243562.3-201ENST00000559866 R3HDMLQ9H3Y0 253 aa20.37■□□□□ 0.85
AC243562.3-201ENST00000559866 GGA1Q9UJY5 639 aa20.37■□□□□ 0.85
AC243562.3-201ENST00000559866 MYH3P11055 1940 aa20.37■□□□□ 0.85
AC243562.3-201ENST00000559866 PITPNM2Q9BZ72 1349 aa20.36■□□□□ 0.85
AC243562.3-201ENST00000559866 FKBP1BP68106 108 aa20.36■□□□□ 0.85
AC243562.3-201ENST00000559866 NBPF9Q3BBW0 867 aa20.36■□□□□ 0.85
AC243562.3-201ENST00000559866 ANKIB1Q9P2G1 1089 aa20.36■□□□□ 0.85
AC243562.3-201ENST00000559866 RBBP6Q7Z6E9 1792 aaKnown RBP20.36■□□□□ 0.85
AC243562.3-201ENST00000559866 LMOD3Q0VAK6 560 aa20.35■□□□□ 0.85
AC243562.3-201ENST00000559866 TRIM28Q13263 835 aaKnown RBP20.35■□□□□ 0.85
AC243562.3-201ENST00000559866 REM2Q8IYK8 340 aaPredicted RBP20.35■□□□□ 0.85
AC243562.3-201ENST00000559866 DBF4Q9UBU7 674 aaPredicted RBP20.35■□□□□ 0.85
AC243562.3-201ENST00000559866 HDAC9Q9UKV0 1011 aa20.35■□□□□ 0.85
AC243562.3-201ENST00000559866 MKI67P46013 3256 aaKnown RBP20.35■□□□□ 0.85
AC243562.3-201ENST00000559866 G3V3G9 751 aa20.34■□□□□ 0.85
AC243562.3-201ENST00000559866 USP17L8P0C7I0 530 aa20.34■□□□□ 0.85
AC243562.3-201ENST00000559866 DCAF8Q5TAQ9 597 aa20.34■□□□□ 0.85
AC243562.3-201ENST00000559866 ZBTB38Q8NAP3 1195 aaPredicted RBP20.34■□□□□ 0.85
AC243562.3-201ENST00000559866 PHAXQ9H814 394 aaKnown RBP20.34■□□□□ 0.85
AC243562.3-201ENST00000559866 GPR25O00155 361 aa20.33■□□□□ 0.85
AC243562.3-201ENST00000559866 BRCA2P51587 3418 aa20.32■□□□□ 0.84
AC243562.3-201ENST00000559866 CENPFP49454 3210 aa20.32■□□□□ 0.84
AC243562.3-201ENST00000559866 TM4SF4P48230 202 aa20.32■□□□□ 0.84
AC243562.3-201ENST00000559866 PKN2Q16513 984 aaKnown RBP20.32■□□□□ 0.84
AC243562.3-201ENST00000559866 ECM29Q5VYK3 1845 aa20.32■□□□□ 0.84
AC243562.3-201ENST00000559866 A0A1B0GUL6 1792 aa20.31■□□□□ 0.84
AC243562.3-201ENST00000559866 HOXB7P09629 217 aa20.31■□□□□ 0.84
AC243562.3-201ENST00000559866 FBXO46Q6PJ61 603 aaPredicted RBP20.31■□□□□ 0.84
AC243562.3-201ENST00000559866 MYD88Q99836 296 aa20.31■□□□□ 0.84
AC243562.3-201ENST00000559866 HYPKQ9NX55 129 aa20.31■□□□□ 0.84
AC243562.3-201ENST00000559866 FZD1Q9UP38 647 aa20.31■□□□□ 0.84
AC243562.3-201ENST00000559866 XDHP47989 1333 aa20.3■□□□□ 0.84
AC243562.3-201ENST00000559866 USP17L3A6NCW0 530 aa20.3■□□□□ 0.84
AC243562.3-201ENST00000559866 USP17L4A6NCW7 530 aa20.3■□□□□ 0.84
AC243562.3-201ENST00000559866 SASH1O94885 1247 aa20.3■□□□□ 0.84
AC243562.3-201ENST00000559866 DUSP27Q5VZP5 1158 aa20.3■□□□□ 0.84
AC243562.3-201ENST00000559866 USP17L1Q7RTZ2 530 aa20.3■□□□□ 0.84
AC243562.3-201ENST00000559866 PTPN12Q05209 780 aaKnown RBP20.29■□□□□ 0.84
AC243562.3-201ENST00000559866 PRKG1Q13976 671 aa20.29■□□□□ 0.84
AC243562.3-201ENST00000559866 TTLL12Q14166 644 aaPredicted RBP20.29■□□□□ 0.84
AC243562.3-201ENST00000559866 DACT2Q5SW24 774 aa20.29■□□□□ 0.84
AC243562.3-201ENST00000559866 MED23Q9ULK4 1368 aa20.29■□□□□ 0.84
AC243562.3-201ENST00000559866 SSC5DA1L4H1 1573 aa20.29■□□□□ 0.84
AC243562.3-201ENST00000559866 WNT10BO00744 389 aa20.28■□□□□ 0.84
AC243562.3-201ENST00000559866 PCCAP05165 728 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms