RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 TMX4Q9H1E5 349 aaPredicted RBP15.47■□□□□ 0.07
GABPB1-208ENST00000558970 PCDHB15Q9Y5E8 787 aa15.47■□□□□ 0.07
GABPB1-208ENST00000558970 APBB1O00213 710 aa15.46■□□□□ 0.07
GABPB1-208ENST00000558970 PTPN12Q05209 780 aaKnown RBP15.46■□□□□ 0.07
GABPB1-208ENST00000558970 MTX1Q13505 466 aa15.46■□□□□ 0.07
GABPB1-208ENST00000558970 ARHGAP27Q6ZUM4 889 aa15.46■□□□□ 0.07
GABPB1-208ENST00000558970 SIRT2Q8IXJ6 389 aa15.46■□□□□ 0.07
GABPB1-208ENST00000558970 ANKIB1Q9P2G1 1089 aa15.46■□□□□ 0.07
GABPB1-208ENST00000558970 ATP6V0A2Q9Y487 856 aa15.46■□□□□ 0.07
GABPB1-208ENST00000558970 SBF1O95248 1867 aa15.46■□□□□ 0.06
GABPB1-208ENST00000558970 DUOX1Q9NRD9 1551 aa15.45■□□□□ 0.06
GABPB1-208ENST00000558970 TAF5LO75529 589 aa15.45■□□□□ 0.06
GABPB1-208ENST00000558970 RASSF7Q02833 373 aa15.45■□□□□ 0.06
GABPB1-208ENST00000558970 OS9Q13438 667 aaPredicted RBP15.45■□□□□ 0.06
GABPB1-208ENST00000558970 CCDC93Q567U6 631 aa15.45■□□□□ 0.06
GABPB1-208ENST00000558970 IFFO2Q5TF58 517 aa15.45■□□□□ 0.06
GABPB1-208ENST00000558970 GPR101Q96P66 508 aaPredicted RBP15.45■□□□□ 0.06
GABPB1-208ENST00000558970 BSDC1Q9NW68 430 aaPredicted RBP15.45■□□□□ 0.06
GABPB1-208ENST00000558970 NSFL1CQ9UNZ2 370 aaKnown RBP15.45■□□□□ 0.06
GABPB1-208ENST00000558970 SURF6O75683 361 aaKnown RBP15.44■□□□□ 0.06
GABPB1-208ENST00000558970 GPSM2P81274 684 aa15.44■□□□□ 0.06
GABPB1-208ENST00000558970 CHRNDQ07001 517 aa15.44■□□□□ 0.06
GABPB1-208ENST00000558970 POLA2Q14181 598 aa15.44■□□□□ 0.06
GABPB1-208ENST00000558970 RPAP2Q8IXW5 612 aaPredicted RBP15.44■□□□□ 0.06
GABPB1-208ENST00000558970 SP8Q8IXZ3 490 aa15.44■□□□□ 0.06
GABPB1-208ENST00000558970 SSH3Q8TE77 659 aa15.44■□□□□ 0.06
GABPB1-208ENST00000558970 EXOC6BQ9Y2D4 811 aa15.44■□□□□ 0.06
GABPB1-208ENST00000558970 TIAM2Q8IVF5 1701 aa15.43■□□□□ 0.06
GABPB1-208ENST00000558970 WTIPA6NIX2 430 aaPredicted RBP15.43■□□□□ 0.06
GABPB1-208ENST00000558970 SNAP23O00161 211 aa15.43■□□□□ 0.06
GABPB1-208ENST00000558970 HMMRO75330 724 aa15.43■□□□□ 0.06
GABPB1-208ENST00000558970 METTL24Q5JXM2 366 aa15.43■□□□□ 0.06
GABPB1-208ENST00000558970 DPP8Q6V1X1 898 aaPredicted RBP15.43■□□□□ 0.06
GABPB1-208ENST00000558970 C7orf43Q8WVR3 580 aa15.43■□□□□ 0.06
GABPB1-208ENST00000558970 MINPP1Q9UNW1 487 aa15.43■□□□□ 0.06
GABPB1-208ENST00000558970 C6orf229H3BNL8 230 aa15.42■□□□□ 0.06
GABPB1-208ENST00000558970 EYA2O00167 538 aa15.42■□□□□ 0.06
GABPB1-208ENST00000558970 UFL1O94874 794 aa15.42■□□□□ 0.06
GABPB1-208ENST00000558970 G3BP1Q13283 466 aaKnown RBP eCLIP15.42■□□□□ 0.06
GABPB1-208ENST00000558970 TMC4Q7Z404 712 aa15.42■□□□□ 0.06
GABPB1-208ENST00000558970 MPNDQ8N594 471 aa15.42■□□□□ 0.06
GABPB1-208ENST00000558970 COPRSQ9NQ92 184 aa15.42■□□□□ 0.06
GABPB1-208ENST00000558970 MYH13Q9UKX3 1938 aa15.42■□□□□ 0.06
GABPB1-208ENST00000558970 DICER1Q9UPY3 1922 aaKnown RBP15.41■□□□□ 0.06
GABPB1-208ENST00000558970 ARAP2Q8WZ64 1704 aa15.41■□□□□ 0.06
GABPB1-208ENST00000558970 NFKBIEO00221 500 aa15.41■□□□□ 0.06
GABPB1-208ENST00000558970 RIMBP2O15034 1052 aa15.41■□□□□ 0.06
GABPB1-208ENST00000558970 KCNJ4P48050 445 aa15.41■□□□□ 0.06
GABPB1-208ENST00000558970 SOGA3Q5TF21 947 aa15.41■□□□□ 0.06
GABPB1-208ENST00000558970 ATG9AQ7Z3C6 839 aa15.41■□□□□ 0.06
GABPB1-208ENST00000558970 RIPOR2Q9Y4F9 1068 aa15.41■□□□□ 0.06
GABPB1-208ENST00000558970 SNED1Q8TER0 1413 aa15.41■□□□□ 0.06
GABPB1-208ENST00000558970 XDHP47989 1333 aa15.41■□□□□ 0.06
GABPB1-208ENST00000558970 RTKN2Q8IZC4 609 aa15.4■□□□□ 0.06
GABPB1-208ENST00000558970 TAOK3Q9H2K8 898 aa15.4■□□□□ 0.06
GABPB1-208ENST00000558970 ZNF277Q9NRM2 450 aaPredicted RBP15.4■□□□□ 0.06
GABPB1-208ENST00000558970 POLLQ9UGP5 575 aa15.4■□□□□ 0.06
GABPB1-208ENST00000558970 GGA1Q9UJY5 639 aa15.4■□□□□ 0.06
GABPB1-208ENST00000558970 MROH5Q6ZUA9 1318 aa15.4■□□□□ 0.06
GABPB1-208ENST00000558970 TFCP2Q12800 502 aa15.39■□□□□ 0.05
GABPB1-208ENST00000558970 ANKRD2Q9GZV1 360 aa15.39■□□□□ 0.05
GABPB1-208ENST00000558970 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.39■□□□□ 0.05
GABPB1-208ENST00000558970 CIAO1O76071 339 aa15.38■□□□□ 0.05
GABPB1-208ENST00000558970 KLRK1P26718 216 aa15.38■□□□□ 0.05
GABPB1-208ENST00000558970 IL15P40933 162 aaPredicted RBP15.38■□□□□ 0.05
GABPB1-208ENST00000558970 FKBP4Q02790 459 aaKnown RBP eCLIP15.38■□□□□ 0.05
GABPB1-208ENST00000558970 AOC3Q16853 763 aa15.38■□□□□ 0.05
GABPB1-208ENST00000558970 CC2D2BQ6DHV5 1058 aa15.38■□□□□ 0.05
GABPB1-208ENST00000558970 TBC1D16Q8TBP0 767 aa15.38■□□□□ 0.05
GABPB1-208ENST00000558970 GPBP1L1Q9HC44 474 aaPredicted RBP15.38■□□□□ 0.05
GABPB1-208ENST00000558970 CEP126Q9P2H0 1117 aa15.38■□□□□ 0.05
GABPB1-208ENST00000558970 COL4A5P29400 1685 aa15.38■□□□□ 0.05
GABPB1-208ENST00000558970 PPIP5K2O43314 1243 aa15.37■□□□□ 0.05
GABPB1-208ENST00000558970 SASH1O94885 1247 aa15.37■□□□□ 0.05
GABPB1-208ENST00000558970 IGHDP01880 384 aa15.37■□□□□ 0.05
GABPB1-208ENST00000558970 AAMPQ13685 434 aa15.37■□□□□ 0.05
GABPB1-208ENST00000558970 IL1RAPL2Q9NP60 686 aa15.37■□□□□ 0.05
GABPB1-208ENST00000558970 ZNF804BA4D1E1 1349 aa15.37■□□□□ 0.05
GABPB1-208ENST00000558970 SMARCA5O60264 1052 aaPredicted RBP15.36■□□□□ 0.05
GABPB1-208ENST00000558970 PDE8BO95263 885 aa15.36■□□□□ 0.05
GABPB1-208ENST00000558970 ATP2B4P23634 1241 aa15.36■□□□□ 0.05
GABPB1-208ENST00000558970 PRELPP51888 382 aa15.36■□□□□ 0.05
GABPB1-208ENST00000558970 WASHC4Q2M389 1173 aa15.36■□□□□ 0.05
GABPB1-208ENST00000558970 VGLL2Q8N8G2 317 aa15.36■□□□□ 0.05
GABPB1-208ENST00000558970 PODXL2Q9NZ53 605 aa15.36■□□□□ 0.05
GABPB1-208ENST00000558970 ZNF609O15014 1411 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 HSPA6P17066 643 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 IARSP41252 1262 aaKnown RBP15.35■□□□□ 0.05
GABPB1-208ENST00000558970 ATP2B3Q16720 1220 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 DOK7Q18PE1 504 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 B4GALNT3Q6L9W6 998 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 TXNRD3Q86VQ6 643 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 LARGE2Q8N3Y3 721 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 SUPT20HQ8NEM7 779 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 NEUROD6Q96NK8 337 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 PSMD1Q99460 953 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 RWDD1Q9H446 243 aaPredicted RBP15.35■□□□□ 0.05
GABPB1-208ENST00000558970 RNF181Q9P0P0 153 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 FBXO3Q9UK99 471 aa15.35■□□□□ 0.05
GABPB1-208ENST00000558970 NOP58Q9Y2X3 529 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms