RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 TMC4Q7Z404 712 aa12.65□□□□□ -0.38
RIPK3-205ENST00000557253 SCAF8Q9UPN6 1271 aaKnown RBP12.65□□□□□ -0.38
RIPK3-205ENST00000557253 MAPK8IP3Q9UPT6 1336 aa12.64□□□□□ -0.39
RIPK3-205ENST00000557253 TBC1D8O95759 1140 aa12.64□□□□□ -0.39
RIPK3-205ENST00000557253 ANGEL2Q5VTE6 544 aaKnown RBP12.64□□□□□ -0.39
RIPK3-205ENST00000557253 MOB2Q70IA6 237 aa12.64□□□□□ -0.39
RIPK3-205ENST00000557253 FAM89AQ96GI7 184 aa12.64□□□□□ -0.39
RIPK3-205ENST00000557253 EYA3Q99504 573 aa12.64□□□□□ -0.39
RIPK3-205ENST00000557253 HDAC9Q9UKV0 1011 aa12.64□□□□□ -0.39
RIPK3-205ENST00000557253 ZNF316A6NFI3 1004 aaPredicted RBP12.63□□□□□ -0.39
RIPK3-205ENST00000557253 ATP5J2-PTCD1G3V325 749 aa12.63□□□□□ -0.39
RIPK3-205ENST00000557253 SCARF1Q14162 830 aa12.63□□□□□ -0.39
RIPK3-205ENST00000557253 TBC1D16Q8TBP0 767 aa12.63□□□□□ -0.39
RIPK3-205ENST00000557253 ZNF296Q8WUU4 475 aaPredicted RBP12.63□□□□□ -0.39
RIPK3-205ENST00000557253 SCN9AQ15858 1988 aa12.62□□□□□ -0.39
RIPK3-205ENST00000557253 G3V3G9 751 aa12.62□□□□□ -0.39
RIPK3-205ENST00000557253 VIL1P09327 827 aaKnown RBP12.62□□□□□ -0.39
RIPK3-205ENST00000557253 RIPK4P57078 832 aa12.62□□□□□ -0.39
RIPK3-205ENST00000557253 SF3B3Q15393 1217 aaKnown RBP12.62□□□□□ -0.39
RIPK3-205ENST00000557253 KRT24Q2M2I5 525 aa12.62□□□□□ -0.39
RIPK3-205ENST00000557253 DCAF8Q5TAQ9 597 aa12.62□□□□□ -0.39
RIPK3-205ENST00000557253 ZC3H12CQ9C0D7 883 aaKnown RBP12.62□□□□□ -0.39
RIPK3-205ENST00000557253 UBE2Q2LH0YL09 131 aa12.61□□□□□ -0.39
RIPK3-205ENST00000557253 MKRN3Q13064 507 aaKnown RBP12.61□□□□□ -0.39
RIPK3-205ENST00000557253 PRAMEF18Q5VWM3 479 aa12.61□□□□□ -0.39
RIPK3-205ENST00000557253 REM2Q8IYK8 340 aaPredicted RBP12.61□□□□□ -0.39
RIPK3-205ENST00000557253 PDE4DIPQ5VU43 2346 aa12.61□□□□□ -0.39
RIPK3-205ENST00000557253 UFL1O94874 794 aa12.6□□□□□ -0.39
RIPK3-205ENST00000557253 RPS8P62241 208 aaKnown RBP12.6□□□□□ -0.39
RIPK3-205ENST00000557253 SEC31BQ9NQW1 1179 aa12.6□□□□□ -0.39
RIPK3-205ENST00000557253 CHPF2Q9P2E5 772 aa12.6□□□□□ -0.39
RIPK3-205ENST00000557253 PAPPA2Q9BXP8 1791 aa12.59□□□□□ -0.39
RIPK3-205ENST00000557253 IRS4O14654 1257 aaPredicted RBP12.59□□□□□ -0.39
RIPK3-205ENST00000557253 ZNF280AP59817 542 aaPredicted RBP12.59□□□□□ -0.39
RIPK3-205ENST00000557253 TTLL12Q14166 644 aaPredicted RBP12.59□□□□□ -0.39
RIPK3-205ENST00000557253 PKN2Q16513 984 aaKnown RBP12.59□□□□□ -0.39
RIPK3-205ENST00000557253 RSBN1LQ6PCB5 846 aaPredicted RBP12.59□□□□□ -0.39
RIPK3-205ENST00000557253 ANKRD13DQ6ZTN6 518 aa12.59□□□□□ -0.39
RIPK3-205ENST00000557253 PLBD2Q8NHP8 589 aa12.59□□□□□ -0.39
RIPK3-205ENST00000557253 ISCA1Q9BUE6 129 aa12.59□□□□□ -0.39
RIPK3-205ENST00000557253 PNNQ9H307 717 aaKnown RBP12.59□□□□□ -0.39
RIPK3-205ENST00000557253 MYOZ2Q9NPC6 264 aa12.59□□□□□ -0.39
RIPK3-205ENST00000557253 ANKIB1Q9P2G1 1089 aa12.59□□□□□ -0.39
RIPK3-205ENST00000557253 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
RIPK3-205ENST00000557253 GPR25O00155 361 aa12.58□□□□□ -0.4
RIPK3-205ENST00000557253 FKBP1BP68106 108 aa12.58□□□□□ -0.4
RIPK3-205ENST00000557253 GGA1Q9UJY5 639 aa12.58□□□□□ -0.4
RIPK3-205ENST00000557253 USP17L8P0C7I0 530 aa12.57□□□□□ -0.4
RIPK3-205ENST00000557253 NEUROD2Q15784 382 aa12.57□□□□□ -0.4
RIPK3-205ENST00000557253 NBPF9Q3BBW0 867 aa12.57□□□□□ -0.4
RIPK3-205ENST00000557253 FBXO46Q6PJ61 603 aaPredicted RBP12.57□□□□□ -0.4
RIPK3-205ENST00000557253 AGBL3Q8NEM8 1001 aa12.57□□□□□ -0.4
RIPK3-205ENST00000557253 CCDC85AQ96PX6 553 aaPredicted RBP12.57□□□□□ -0.4
RIPK3-205ENST00000557253 R3HDMLQ9H3Y0 253 aa12.57□□□□□ -0.4
RIPK3-205ENST00000557253 BABAM1Q9NWV8 329 aa12.57□□□□□ -0.4
RIPK3-205ENST00000557253 PODXL2Q9NZ53 605 aa12.57□□□□□ -0.4
RIPK3-205ENST00000557253 TMPOP42166 694 aaKnown RBP12.56□□□□□ -0.4
RIPK3-205ENST00000557253 TM4SF4P48230 202 aa12.56□□□□□ -0.4
RIPK3-205ENST00000557253 PRKG1Q13976 671 aa12.56□□□□□ -0.4
RIPK3-205ENST00000557253 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
RIPK3-205ENST00000557253 JARID2Q92833 1246 aaPredicted RBP12.56□□□□□ -0.4
RIPK3-205ENST00000557253 MXD3Q9BW11 206 aa12.56□□□□□ -0.4
RIPK3-205ENST00000557253 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
RIPK3-205ENST00000557253 PITPNM2Q9BZ72 1349 aa12.56□□□□□ -0.4
RIPK3-205ENST00000557253 WTIPA6NIX2 430 aaPredicted RBP12.55□□□□□ -0.4
RIPK3-205ENST00000557253 FBXW7Q969H0 707 aa12.55□□□□□ -0.4
RIPK3-205ENST00000557253 GMLQ99445 158 aa12.55□□□□□ -0.4
RIPK3-205ENST00000557253 PSME4Q14997 1843 aa12.55□□□□□ -0.4
RIPK3-205ENST00000557253 USP17L3A6NCW0 530 aa12.54□□□□□ -0.4
RIPK3-205ENST00000557253 USP17L4A6NCW7 530 aa12.54□□□□□ -0.4
RIPK3-205ENST00000557253 CHL1O00533 1208 aa12.54□□□□□ -0.4
RIPK3-205ENST00000557253 FKTNO75072 461 aa12.54□□□□□ -0.4
RIPK3-205ENST00000557253 HABP4Q5JVS0 413 aaKnown RBP12.54□□□□□ -0.4
RIPK3-205ENST00000557253 USP17L1Q7RTZ2 530 aa12.54□□□□□ -0.4
RIPK3-205ENST00000557253 GCC1Q96CN9 775 aa12.54□□□□□ -0.4
RIPK3-205ENST00000557253 POTEFA5A3E0 1075 aa12.53□□□□□ -0.4
RIPK3-205ENST00000557253 PTPN12Q05209 780 aaKnown RBP12.53□□□□□ -0.4
RIPK3-205ENST00000557253 LMOD3Q0VAK6 560 aa12.53□□□□□ -0.4
RIPK3-205ENST00000557253 SREBF2Q12772 1141 aa12.53□□□□□ -0.4
RIPK3-205ENST00000557253 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
RIPK3-205ENST00000557253 CCDC146Q8IYE0 955 aa12.53□□□□□ -0.4
RIPK3-205ENST00000557253 ZBTB38Q8NAP3 1195 aaPredicted RBP12.53□□□□□ -0.4
RIPK3-205ENST00000557253 DBF4Q9UBU7 674 aaPredicted RBP12.53□□□□□ -0.4
RIPK3-205ENST00000557253 FZD1Q9UP38 647 aa12.53□□□□□ -0.4
RIPK3-205ENST00000557253 ZNF609O15014 1411 aa12.53□□□□□ -0.4
RIPK3-205ENST00000557253 SASH1O94885 1247 aa12.52□□□□□ -0.41
RIPK3-205ENST00000557253 NF2P35240 595 aa12.52□□□□□ -0.41
RIPK3-205ENST00000557253 TRIM28Q13263 835 aaKnown RBP12.52□□□□□ -0.41
RIPK3-205ENST00000557253 CCDC152Q4G0S7 254 aa12.52□□□□□ -0.41
RIPK3-205ENST00000557253 MYD88Q99836 296 aa12.52□□□□□ -0.41
RIPK3-205ENST00000557253 XDHP47989 1333 aa12.52□□□□□ -0.41
RIPK3-205ENST00000557253 WNT10BO00744 389 aa12.51□□□□□ -0.41
RIPK3-205ENST00000557253 NOM1Q5C9Z4 860 aaKnown RBP12.51□□□□□ -0.41
RIPK3-205ENST00000557253 PODNQ7Z5L7 613 aa12.51□□□□□ -0.41
RIPK3-205ENST00000557253 PHAXQ9H814 394 aaKnown RBP12.51□□□□□ -0.41
RIPK3-205ENST00000557253 HYPKQ9NX55 129 aa12.51□□□□□ -0.41
RIPK3-205ENST00000557253 TRIM17Q9Y577 477 aa12.51□□□□□ -0.41
RIPK3-205ENST00000557253 PDE8AO60658 829 aa12.5□□□□□ -0.41
RIPK3-205ENST00000557253 ATP2B4P23634 1241 aa12.5□□□□□ -0.41
RIPK3-205ENST00000557253 DACT2Q5SW24 774 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms