RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 TMC4Q7Z404 712 aa14.26□□□□□ -0.13
GABRB3-210ENST00000556166 MYH3P11055 1940 aa14.26□□□□□ -0.13
GABRB3-210ENST00000556166 SNED1Q8TER0 1413 aa14.26□□□□□ -0.13
GABRB3-210ENST00000556166 DLEC1Q9Y238 1755 aa14.26□□□□□ -0.13
GABRB3-210ENST00000556166 SURF6O75683 361 aaKnown RBP14.26□□□□□ -0.13
GABRB3-210ENST00000556166 CIAO1O76071 339 aa14.26□□□□□ -0.13
GABRB3-210ENST00000556166 CHRNDQ07001 517 aa14.26□□□□□ -0.13
GABRB3-210ENST00000556166 PELP1Q8IZL8 1130 aaKnown RBP14.26□□□□□ -0.13
GABRB3-210ENST00000556166 CNNM1Q9NRU3 951 aa14.26□□□□□ -0.13
GABRB3-210ENST00000556166 TAF5LO75529 589 aa14.25□□□□□ -0.13
GABRB3-210ENST00000556166 SASH1O94885 1247 aa14.25□□□□□ -0.13
GABRB3-210ENST00000556166 NEFLP07196 543 aa14.25□□□□□ -0.13
GABRB3-210ENST00000556166 HDAC1Q13547 482 aaPredicted RBP14.25□□□□□ -0.13
GABRB3-210ENST00000556166 VGLL2Q8N8G2 317 aa14.25□□□□□ -0.13
GABRB3-210ENST00000556166 EXOC6BQ9Y2D4 811 aa14.25□□□□□ -0.13
GABRB3-210ENST00000556166 HMMRO75330 724 aa14.24□□□□□ -0.13
GABRB3-210ENST00000556166 DCTPP1Q9H773 170 aa14.24□□□□□ -0.13
GABRB3-210ENST00000556166 POLLQ9UGP5 575 aa14.24□□□□□ -0.13
GABRB3-210ENST00000556166 FBXO3Q9UK99 471 aa14.24□□□□□ -0.13
GABRB3-210ENST00000556166 NSFL1CQ9UNZ2 370 aaKnown RBP14.24□□□□□ -0.13
GABRB3-210ENST00000556166 BRCA1P38398 1863 aaKnown RBP14.24□□□□□ -0.13
GABRB3-210ENST00000556166 NFKBIEO00221 500 aa14.23□□□□□ -0.13
GABRB3-210ENST00000556166 IL15P40933 162 aaPredicted RBP14.23□□□□□ -0.13
GABRB3-210ENST00000556166 PRELPP51888 382 aa14.23□□□□□ -0.13
GABRB3-210ENST00000556166 TFCP2Q12800 502 aa14.23□□□□□ -0.13
GABRB3-210ENST00000556166 G3BP1Q13283 466 aaKnown RBP eCLIP14.23□□□□□ -0.13
GABRB3-210ENST00000556166 GPR162Q16538 588 aa14.23□□□□□ -0.13
GABRB3-210ENST00000556166 CCDC93Q567U6 631 aa14.23□□□□□ -0.13
GABRB3-210ENST00000556166 CC2D2BQ6DHV5 1058 aa14.23□□□□□ -0.13
GABRB3-210ENST00000556166 MPNDQ8N594 471 aa14.23□□□□□ -0.13
GABRB3-210ENST00000556166 GPR101Q96P66 508 aaPredicted RBP14.23□□□□□ -0.13
GABRB3-210ENST00000556166 PODXL2Q9NZ53 605 aa14.23□□□□□ -0.13
GABRB3-210ENST00000556166 MROH5Q6ZUA9 1318 aa14.22□□□□□ -0.13
GABRB3-210ENST00000556166 METTL24Q5JXM2 366 aa14.22□□□□□ -0.13
GABRB3-210ENST00000556166 RTKN2Q8IZC4 609 aa14.22□□□□□ -0.13
GABRB3-210ENST00000556166 TBC1D16Q8TBP0 767 aa14.22□□□□□ -0.13
GABRB3-210ENST00000556166 RTFDC1Q9BY42 306 aaPredicted RBP14.22□□□□□ -0.13
GABRB3-210ENST00000556166 ANKIB1Q9P2G1 1089 aa14.22□□□□□ -0.13
GABRB3-210ENST00000556166 PDE8BO95263 885 aa14.22□□□□□ -0.13
GABRB3-210ENST00000556166 KLRK1P26718 216 aa14.22□□□□□ -0.13
GABRB3-210ENST00000556166 DPP8Q6V1X1 898 aaPredicted RBP14.22□□□□□ -0.13
GABRB3-210ENST00000556166 ARHGAP27Q6ZUM4 889 aa14.22□□□□□ -0.13
GABRB3-210ENST00000556166 ANKRD2Q9GZV1 360 aa14.22□□□□□ -0.13
GABRB3-210ENST00000556166 XDHP47989 1333 aa14.21□□□□□ -0.13
GABRB3-210ENST00000556166 IRS2Q9Y4H2 1338 aa14.21□□□□□ -0.13
GABRB3-210ENST00000556166 APBB1O00213 710 aa14.21□□□□□ -0.14
GABRB3-210ENST00000556166 FGFR2P21802 821 aa14.21□□□□□ -0.14
GABRB3-210ENST00000556166 SOGA3Q5TF21 947 aa14.21□□□□□ -0.14
GABRB3-210ENST00000556166 TXNRD3Q86VQ6 643 aa14.21□□□□□ -0.14
GABRB3-210ENST00000556166 RWDD1Q9H446 243 aaPredicted RBP14.21□□□□□ -0.14
GABRB3-210ENST00000556166 CEP126Q9P2H0 1117 aa14.21□□□□□ -0.14
GABRB3-210ENST00000556166 UFL1O94874 794 aa14.2□□□□□ -0.14
GABRB3-210ENST00000556166 FKBP4Q02790 459 aaKnown RBP eCLIP14.2□□□□□ -0.14
GABRB3-210ENST00000556166 RASSF7Q02833 373 aa14.2□□□□□ -0.14
GABRB3-210ENST00000556166 PSMD1Q99460 953 aa14.2□□□□□ -0.14
GABRB3-210ENST00000556166 ZNF277Q9NRM2 450 aaPredicted RBP14.2□□□□□ -0.14
GABRB3-210ENST00000556166 GGA1Q9UJY5 639 aa14.2□□□□□ -0.14
GABRB3-210ENST00000556166 ZNF804BA4D1E1 1349 aa14.19□□□□□ -0.14
GABRB3-210ENST00000556166 C6orf229H3BNL8 230 aa14.19□□□□□ -0.14
GABRB3-210ENST00000556166 SMARCA5O60264 1052 aaPredicted RBP14.19□□□□□ -0.14
GABRB3-210ENST00000556166 ATP2B4P23634 1241 aa14.19□□□□□ -0.14
GABRB3-210ENST00000556166 TIMM10P62072 90 aa14.19□□□□□ -0.14
GABRB3-210ENST00000556166 OS9Q13438 667 aaPredicted RBP14.19□□□□□ -0.14
GABRB3-210ENST00000556166 GRIPAP1Q4V328 841 aa14.19□□□□□ -0.14
GABRB3-210ENST00000556166 RHPN1Q8TCX5 695 aa14.19□□□□□ -0.14
GABRB3-210ENST00000556166 TMX4Q9H1E5 349 aaPredicted RBP14.19□□□□□ -0.14
GABRB3-210ENST00000556166 LEMD3Q9Y2U8 911 aa14.19□□□□□ -0.14
GABRB3-210ENST00000556166 DUOX1Q9NRD9 1551 aa14.19□□□□□ -0.14
GABRB3-210ENST00000556166 UTRNP46939 3433 aa14.18□□□□□ -0.14
GABRB3-210ENST00000556166 RAB11FIP3O75154 756 aa14.18□□□□□ -0.14
GABRB3-210ENST00000556166 HSP90AB4PQ58FF6 505 aa14.18□□□□□ -0.14
GABRB3-210ENST00000556166 SMC5Q8IY18 1101 aa14.18□□□□□ -0.14
GABRB3-210ENST00000556166 LRRC37AA6NMS7 1700 aa14.18□□□□□ -0.14
GABRB3-210ENST00000556166 LTBP3Q9NS15 1303 aa14.18□□□□□ -0.14
GABRB3-210ENST00000556166 GRIN3BO60391 1043 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 CACNA1SQ13698 1873 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 UBE4AQ14139 1066 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 PUM3Q15397 648 aaKnown RBP14.17□□□□□ -0.14
GABRB3-210ENST00000556166 ERICH6BQ5W0A0 696 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 EAF2Q96CJ1 260 aaPredicted RBP14.17□□□□□ -0.14
GABRB3-210ENST00000556166 TAOK3Q9H2K8 898 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 IL1RAPL2Q9NP60 686 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 LTBP1Q14766 1721 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 SPEF2Q9C093 1822 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 RIMBP2O15034 1052 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 ADORA1P30542 326 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 ATP2B3Q16720 1220 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 ERC1Q8IUD2 1116 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 KIF1BPQ96EK5 621 aa14.17□□□□□ -0.14
GABRB3-210ENST00000556166 KCNJ4P48050 445 aa14.16□□□□□ -0.14
GABRB3-210ENST00000556166 KIAA2012Q0VF49 1180 aa14.16□□□□□ -0.14
GABRB3-210ENST00000556166 AOC3Q16853 763 aa14.16□□□□□ -0.14
GABRB3-210ENST00000556166 WASHC4Q2M389 1173 aa14.16□□□□□ -0.14
GABRB3-210ENST00000556166 TNNI3KQ59H18 835 aa14.16□□□□□ -0.14
GABRB3-210ENST00000556166 B4GALNT3Q6L9W6 998 aa14.16□□□□□ -0.14
GABRB3-210ENST00000556166 C15orf52Q6ZUT6 534 aaKnown RBP14.16□□□□□ -0.14
GABRB3-210ENST00000556166 LPIN2Q92539 896 aa14.16□□□□□ -0.14
GABRB3-210ENST00000556166 GCC1Q96CN9 775 aa14.16□□□□□ -0.14
GABRB3-210ENST00000556166 FAM84BQ96KN1 310 aaPredicted RBP14.16□□□□□ -0.14
GABRB3-210ENST00000556166 GPR108Q9NPR9 543 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms