RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 IGHMBP2P38935 993 aaKnown RBP13.49□□□□□ -0.25
SHMT2-213ENST00000554600 FAM161AQ3B820 660 aa13.49□□□□□ -0.25
SHMT2-213ENST00000554600 ALDH1L2Q3SY69 923 aa13.49□□□□□ -0.25
SHMT2-213ENST00000554600 TRMT2AQ8IZ69 625 aaKnown RBP13.49□□□□□ -0.25
SHMT2-213ENST00000554600 PLA2G12BQ9BX93 195 aa13.49□□□□□ -0.25
SHMT2-213ENST00000554600 POLLQ9UGP5 575 aa13.49□□□□□ -0.25
SHMT2-213ENST00000554600 GGA1Q9UJY5 639 aa13.49□□□□□ -0.25
SHMT2-213ENST00000554600 RTL9Q8NET4 1388 aa13.48□□□□□ -0.25
SHMT2-213ENST00000554600 XDHP47989 1333 aa13.48□□□□□ -0.25
SHMT2-213ENST00000554600 RAD17O75943 681 aa13.48□□□□□ -0.25
SHMT2-213ENST00000554600 CT47B1P0C2W7 299 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-213ENST00000554600 EPHX2P34913 555 aa13.48□□□□□ -0.25
SHMT2-213ENST00000554600 CASP7P55210 303 aa13.48□□□□□ -0.25
SHMT2-213ENST00000554600 DOK7Q18PE1 504 aa13.48□□□□□ -0.25
SHMT2-213ENST00000554600 COL13A1Q5TAT6 717 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-213ENST00000554600 CIAPIN1Q6FI81 312 aa13.48□□□□□ -0.25
SHMT2-213ENST00000554600 TBC1D16Q8TBP0 767 aa13.48□□□□□ -0.25
SHMT2-213ENST00000554600 MPHOSPH8Q99549 860 aa13.48□□□□□ -0.25
SHMT2-213ENST00000554600 ZC3H12CQ9C0D7 883 aaKnown RBP13.48□□□□□ -0.25
SHMT2-213ENST00000554600 TAF1DQ9H5J8 278 aaPredicted RBP13.48□□□□□ -0.25
SHMT2-213ENST00000554600 DBNDD1Q9H9R9 158 aa13.48□□□□□ -0.25
SHMT2-213ENST00000554600 ANKRD18BA2A2Z9 1011 aa13.47□□□□□ -0.25
SHMT2-213ENST00000554600 POTEIP0CG38 1075 aa13.47□□□□□ -0.25
SHMT2-213ENST00000554600 POTEJP0CG39 1038 aa13.47□□□□□ -0.25
SHMT2-213ENST00000554600 CXCL9Q07325 125 aa13.47□□□□□ -0.25
SHMT2-213ENST00000554600 TNIP1Q15025 636 aa13.47□□□□□ -0.25
SHMT2-213ENST00000554600 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
SHMT2-213ENST00000554600 ECE2O60344 883 aa13.46□□□□□ -0.25
SHMT2-213ENST00000554600 IFIT5Q13325 482 aaKnown RBP13.46□□□□□ -0.25
SHMT2-213ENST00000554600 TAF7LQ5H9L4 462 aa13.46□□□□□ -0.25
SHMT2-213ENST00000554600 LMBR1LQ6UX01 489 aa13.46□□□□□ -0.25
SHMT2-213ENST00000554600 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-213ENST00000554600 PODXL2Q9NZ53 605 aa13.46□□□□□ -0.25
SHMT2-213ENST00000554600 MINPP1Q9UNW1 487 aa13.46□□□□□ -0.25
SHMT2-213ENST00000554600 TRPM7Q96QT4 1865 aa13.46□□□□□ -0.26
SHMT2-213ENST00000554600 CAPN15O75808 1086 aa13.45□□□□□ -0.26
SHMT2-213ENST00000554600 CSF1RP07333 972 aa13.45□□□□□ -0.26
SHMT2-213ENST00000554600 ATP2B4P23634 1241 aa13.45□□□□□ -0.26
SHMT2-213ENST00000554600 EPS15P42566 896 aa13.45□□□□□ -0.26
SHMT2-213ENST00000554600 GMPSP49915 693 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-213ENST00000554600 FOXO4P98177 505 aa13.45□□□□□ -0.26
SHMT2-213ENST00000554600 PNMA8AQ86V59 439 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-213ENST00000554600 LDHDQ86WU2 507 aa13.45□□□□□ -0.26
SHMT2-213ENST00000554600 ADAMTSL1Q8N6G6 1762 aa13.45□□□□□ -0.26
SHMT2-213ENST00000554600 YDJCA8MPS7 323 aa13.44□□□□□ -0.26
SHMT2-213ENST00000554600 KCNJ4P48050 445 aa13.44□□□□□ -0.26
SHMT2-213ENST00000554600 SCNN1DP51172 638 aa13.44□□□□□ -0.26
SHMT2-213ENST00000554600 CCDC57Q2TAC2 916 aa13.44□□□□□ -0.26
SHMT2-213ENST00000554600 EPHA10Q5JZY3 1008 aa13.44□□□□□ -0.26
SHMT2-213ENST00000554600 SUCLG2Q96I99 432 aa13.44□□□□□ -0.26
SHMT2-213ENST00000554600 NOB1Q9ULX3 412 aaKnown RBP13.44□□□□□ -0.26
SHMT2-213ENST00000554600 PSMD14O00487 310 aa13.43□□□□□ -0.26
SHMT2-213ENST00000554600 NBPF7P0C2Y1 421 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-213ENST00000554600 CCT4P50991 539 aaKnown RBP13.43□□□□□ -0.26
SHMT2-213ENST00000554600 RARSP54136 660 aaKnown RBP13.43□□□□□ -0.26
SHMT2-213ENST00000554600 HTRA3P83110 453 aa13.43□□□□□ -0.26
SHMT2-213ENST00000554600 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
SHMT2-213ENST00000554600 ANKRD2Q9GZV1 360 aa13.43□□□□□ -0.26
SHMT2-213ENST00000554600 GPRC5DQ9NZD1 345 aa13.43□□□□□ -0.26
SHMT2-213ENST00000554600 PLIN1O60240 522 aa13.42□□□□□ -0.26
SHMT2-213ENST00000554600 CHRNDQ07001 517 aa13.42□□□□□ -0.26
SHMT2-213ENST00000554600 TNS4Q8IZW8 715 aa13.42□□□□□ -0.26
SHMT2-213ENST00000554600 HELBQ8NG08 1087 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-213ENST00000554600 ZNF594Q96JF6 807 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-213ENST00000554600 KCNQ5Q9NR82 932 aa13.42□□□□□ -0.26
SHMT2-213ENST00000554600 CNNM1Q9NRU3 951 aa13.42□□□□□ -0.26
SHMT2-213ENST00000554600 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-213ENST00000554600 KIF16BQ96L93 1317 aa13.41□□□□□ -0.26
SHMT2-213ENST00000554600 MYH13Q9UKX3 1938 aa13.41□□□□□ -0.26
SHMT2-213ENST00000554600 WTIPA6NIX2 430 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-213ENST00000554600 H7C1D1 291 aa13.41□□□□□ -0.26
SHMT2-213ENST00000554600 SLC34A2O95436 690 aa13.41□□□□□ -0.26
SHMT2-213ENST00000554600 MAP1SQ66K74 1059 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-213ENST00000554600 LDHAL6AQ6ZMR3 332 aa13.41□□□□□ -0.26
SHMT2-213ENST00000554600 JMYQ8N9B5 988 aa13.41□□□□□ -0.26
SHMT2-213ENST00000554600 FRAT1Q92837 279 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-213ENST00000554600 FBXW7Q969H0 707 aa13.41□□□□□ -0.26
SHMT2-213ENST00000554600 BICC1Q9H694 974 aaKnown RBP13.41□□□□□ -0.26
SHMT2-213ENST00000554600 ADARB2Q9NS39 739 aaKnown RBP13.41□□□□□ -0.26
SHMT2-213ENST00000554600 CNOT7Q9UIV1 285 aaKnown RBP13.41□□□□□ -0.26
SHMT2-213ENST00000554600 LEMD3Q9Y2U8 911 aa13.41□□□□□ -0.26
SHMT2-213ENST00000554600 MED23Q9ULK4 1368 aa13.41□□□□□ -0.26
SHMT2-213ENST00000554600 ZNF804BA4D1E1 1349 aa13.4□□□□□ -0.26
SHMT2-213ENST00000554600 TAF5LO75529 589 aa13.4□□□□□ -0.26
SHMT2-213ENST00000554600 USP50Q70EL3 339 aaPredicted RBP13.4□□□□□ -0.26
SHMT2-213ENST00000554600 MICALL2Q8IY33 904 aa13.4□□□□□ -0.26
SHMT2-213ENST00000554600 UTYO14607 1347 aa13.39□□□□□ -0.27
SHMT2-213ENST00000554600 ZNF646O15015 1829 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-213ENST00000554600 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-213ENST00000554600 RBM26Q5T8P6 1007 aaKnown RBP13.39□□□□□ -0.27
SHMT2-213ENST00000554600 CNTROBQ8N137 903 aa13.39□□□□□ -0.27
SHMT2-213ENST00000554600 KLRG1Q96E93 195 aa13.39□□□□□ -0.27
SHMT2-213ENST00000554600 KAZALD1Q96I82 304 aa13.39□□□□□ -0.27
SHMT2-213ENST00000554600 USP44Q9H0E7 712 aa13.39□□□□□ -0.27
SHMT2-213ENST00000554600 ZBED9Q6R2W3 1325 aa13.39□□□□□ -0.27
SHMT2-213ENST00000554600 SHTN1A0MZ66 631 aa13.38□□□□□ -0.27
SHMT2-213ENST00000554600 IPO8O15397 1037 aaKnown RBP13.38□□□□□ -0.27
SHMT2-213ENST00000554600 BCAR3O75815 825 aa13.38□□□□□ -0.27
SHMT2-213ENST00000554600 UBTFL1P0CB47 393 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-213ENST00000554600 RPS12P25398 132 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms