RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
PTCD2P1-201ENST00000554393 PNMA8AQ86V59 439 aaPredicted RBP13.29□□□□□ -0.28
PTCD2P1-201ENST00000554393 LDHDQ86WU2 507 aa13.29□□□□□ -0.28
PTCD2P1-201ENST00000554393 LINS1Q8NG48 757 aa13.29□□□□□ -0.28
PTCD2P1-201ENST00000554393 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
PTCD2P1-201ENST00000554393 ZNRF3Q9ULT6 936 aa13.29□□□□□ -0.28
PTCD2P1-201ENST00000554393 EPHX2P34913 555 aa13.28□□□□□ -0.28
PTCD2P1-201ENST00000554393 CTSWP56202 376 aa13.28□□□□□ -0.28
PTCD2P1-201ENST00000554393 CWF19L2Q2TBE0 894 aaKnown RBP13.28□□□□□ -0.28
PTCD2P1-201ENST00000554393 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
PTCD2P1-201ENST00000554393 PSME4Q14997 1843 aa13.27□□□□□ -0.28
PTCD2P1-201ENST00000554393 E9PSI1 815 aa13.27□□□□□ -0.29
PTCD2P1-201ENST00000554393 H7C1W4 665 aa13.27□□□□□ -0.29
PTCD2P1-201ENST00000554393 LMOD1P29536 600 aaPredicted RBP13.27□□□□□ -0.29
PTCD2P1-201ENST00000554393 MLLT1Q03111 559 aaPredicted RBP13.27□□□□□ -0.29
PTCD2P1-201ENST00000554393 GCKRQ14397 625 aa13.27□□□□□ -0.29
PTCD2P1-201ENST00000554393 SEC31BQ9NQW1 1179 aa13.27□□□□□ -0.29
PTCD2P1-201ENST00000554393 PODXL2Q9NZ53 605 aa13.27□□□□□ -0.29
PTCD2P1-201ENST00000554393 NSFL1CQ9UNZ2 370 aaKnown RBP13.27□□□□□ -0.29
PTCD2P1-201ENST00000554393 POTEIP0CG38 1075 aa13.26□□□□□ -0.29
PTCD2P1-201ENST00000554393 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
PTCD2P1-201ENST00000554393 GPSM2P81274 684 aa13.26□□□□□ -0.29
PTCD2P1-201ENST00000554393 UBE3BQ7Z3V4 1068 aa13.26□□□□□ -0.29
PTCD2P1-201ENST00000554393 CDC5LQ99459 802 aaKnown RBP13.26□□□□□ -0.29
PTCD2P1-201ENST00000554393 EYA3Q99504 573 aa13.26□□□□□ -0.29
PTCD2P1-201ENST00000554393 PLA2G12BQ9BX93 195 aa13.26□□□□□ -0.29
PTCD2P1-201ENST00000554393 GJA3Q9Y6H8 435 aa13.26□□□□□ -0.29
PTCD2P1-201ENST00000554393 SCNN1DP51172 638 aa13.25□□□□□ -0.29
PTCD2P1-201ENST00000554393 CXCL9Q07325 125 aa13.25□□□□□ -0.29
PTCD2P1-201ENST00000554393 TNIP1Q15025 636 aa13.25□□□□□ -0.29
PTCD2P1-201ENST00000554393 WASHC4Q2M389 1173 aa13.25□□□□□ -0.29
PTCD2P1-201ENST00000554393 ANKRD18AQ8IVF6 992 aa13.25□□□□□ -0.29
PTCD2P1-201ENST00000554393 PIP4P2Q8N4L2 257 aa13.25□□□□□ -0.29
PTCD2P1-201ENST00000554393 TTLL11Q8NHH1 800 aa13.25□□□□□ -0.29
PTCD2P1-201ENST00000554393 JARID2Q92833 1246 aaPredicted RBP13.25□□□□□ -0.29
PTCD2P1-201ENST00000554393 CASP7P55210 303 aa13.24□□□□□ -0.29
PTCD2P1-201ENST00000554393 EAPPQ56P03 285 aaPredicted RBP13.24□□□□□ -0.29
PTCD2P1-201ENST00000554393 CIAPIN1Q6FI81 312 aa13.24□□□□□ -0.29
PTCD2P1-201ENST00000554393 TBC1D16Q8TBP0 767 aa13.24□□□□□ -0.29
PTCD2P1-201ENST00000554393 POLLQ9UGP5 575 aa13.24□□□□□ -0.29
PTCD2P1-201ENST00000554393 SCN9AQ15858 1988 aa13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 TRPM7Q96QT4 1865 aa13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 A0A1B0GUL6 1792 aa13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 XDHP47989 1333 aa13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 PASKQ96RG2 1323 aa13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 C6orf229H3BNL8 230 aa13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 SLFN5Q08AF3 891 aa13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 BEND3Q5T5X7 828 aa13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 USP50Q70EL3 339 aaPredicted RBP13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 IFNLR1Q8IU57 520 aaPredicted RBP13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 GREM2Q9H772 168 aa13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 BSDC1Q9NW68 430 aaPredicted RBP13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 GPRC5DQ9NZD1 345 aa13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 ZBTB47Q9UFB7 747 aaPredicted RBP13.23□□□□□ -0.29
PTCD2P1-201ENST00000554393 YDJCA8MPS7 323 aa13.22□□□□□ -0.29
PTCD2P1-201ENST00000554393 F6X3S4 739 aa13.22□□□□□ -0.29
PTCD2P1-201ENST00000554393 CSF1RP07333 972 aa13.22□□□□□ -0.29
PTCD2P1-201ENST00000554393 EPS15P42566 896 aa13.22□□□□□ -0.29
PTCD2P1-201ENST00000554393 CCDC85AQ96PX6 553 aaPredicted RBP13.22□□□□□ -0.29
PTCD2P1-201ENST00000554393 PRDM10Q9NQV6 1147 aa13.22□□□□□ -0.29
PTCD2P1-201ENST00000554393 ADARB2Q9NS39 739 aaKnown RBP13.22□□□□□ -0.29
PTCD2P1-201ENST00000554393 ANKIB1Q9P2G1 1089 aa13.22□□□□□ -0.29
PTCD2P1-201ENST00000554393 GGA1Q9UJY5 639 aa13.22□□□□□ -0.29
PTCD2P1-201ENST00000554393 ZNF609O15014 1411 aa13.22□□□□□ -0.29
PTCD2P1-201ENST00000554393 ALDH1L1O75891 902 aa13.21□□□□□ -0.29
PTCD2P1-201ENST00000554393 UFL1O94874 794 aa13.21□□□□□ -0.29
PTCD2P1-201ENST00000554393 ITGBL1O95965 494 aaPredicted RBP13.21□□□□□ -0.29
PTCD2P1-201ENST00000554393 PRKAR2AP13861 404 aaKnown RBP13.21□□□□□ -0.29
PTCD2P1-201ENST00000554393 GMPSP49915 693 aaPredicted RBP13.21□□□□□ -0.29
PTCD2P1-201ENST00000554393 TRMT2AQ8IZ69 625 aaKnown RBP13.21□□□□□ -0.29
PTCD2P1-201ENST00000554393 ZC3H12CQ9C0D7 883 aaKnown RBP13.21□□□□□ -0.29
PTCD2P1-201ENST00000554393 PTPRCP08575 1304 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 GRM8O00222 908 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 RIMBP2O15034 1052 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 ECE2O60344 883 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 RAD17O75943 681 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 ITGA6P23229 1130 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 ATP2B4P23634 1241 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 RPS12P25398 132 aaKnown RBP13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 IGHMBP2P38935 993 aaKnown RBP13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 CNTROBQ8N137 903 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 DPF2Q92785 391 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 ABHD8Q96I13 439 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 DBNDD1Q9H9R9 158 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 MINPP1Q9UNW1 487 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 ZNF646O15015 1829 aaPredicted RBP13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 TNRC18O15417 2968 aaPredicted RBP13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
PTCD2P1-201ENST00000554393 CT47B1P0C2W7 299 aaPredicted RBP13.19□□□□□ -0.3
PTCD2P1-201ENST00000554393 MRPL50Q8N5N7 158 aaKnown RBP13.19□□□□□ -0.3
PTCD2P1-201ENST00000554393 BCL2L13Q9BXK5 485 aa13.19□□□□□ -0.3
PTCD2P1-201ENST00000554393 SRCIN1Q9C0H9 1055 aa13.19□□□□□ -0.3
PTCD2P1-201ENST00000554393 PSMD14O00487 310 aa13.18□□□□□ -0.3
PTCD2P1-201ENST00000554393 FOXN1O15353 648 aa13.18□□□□□ -0.3
PTCD2P1-201ENST00000554393 RGS19P49795 217 aa13.18□□□□□ -0.3
PTCD2P1-201ENST00000554393 FOXO4P98177 505 aa13.18□□□□□ -0.3
PTCD2P1-201ENST00000554393 ALDH1L2Q3SY69 923 aa13.18□□□□□ -0.3
PTCD2P1-201ENST00000554393 MAP1SQ66K74 1059 aaPredicted RBP13.18□□□□□ -0.3
PTCD2P1-201ENST00000554393 ZC3H15Q8WU90 426 aaKnown RBP13.18□□□□□ -0.3
PTCD2P1-201ENST00000554393 ANKRD2Q9GZV1 360 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms