RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 C21orf2O43822 256 aa12.81□□□□□ -0.36
LINC00939-203ENST00000545784 PTPN12Q05209 780 aaKnown RBP12.81□□□□□ -0.36
LINC00939-203ENST00000545784 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
LINC00939-203ENST00000545784 KLHDC4Q8TBB5 520 aa12.81□□□□□ -0.36
LINC00939-203ENST00000545784 SSH3Q8TE77 659 aa12.81□□□□□ -0.36
LINC00939-203ENST00000545784 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
LINC00939-203ENST00000545784 DLEC1Q9Y238 1755 aa12.8□□□□□ -0.36
LINC00939-203ENST00000545784 SLX4Q8IY92 1834 aa12.8□□□□□ -0.36
LINC00939-203ENST00000545784 SRGAP3O43295 1099 aa12.8□□□□□ -0.36
LINC00939-203ENST00000545784 PCDHB15Q9Y5E8 787 aa12.8□□□□□ -0.36
LINC00939-203ENST00000545784 BRCA1P38398 1863 aaKnown RBP12.79□□□□□ -0.36
LINC00939-203ENST00000545784 TMC4Q7Z404 712 aa12.79□□□□□ -0.36
LINC00939-203ENST00000545784 RPAP2Q8IXW5 612 aaPredicted RBP12.79□□□□□ -0.36
LINC00939-203ENST00000545784 PUS3Q9BZE2 481 aaKnown RBP12.79□□□□□ -0.36
LINC00939-203ENST00000545784 ZNF219Q9P2Y4 722 aaPredicted RBP12.79□□□□□ -0.36
LINC00939-203ENST00000545784 UTRNP46939 3433 aa12.79□□□□□ -0.36
LINC00939-203ENST00000545784 SNED1Q8TER0 1413 aa12.79□□□□□ -0.36
LINC00939-203ENST00000545784 SLC4A3P48751 1232 aa12.79□□□□□ -0.36
LINC00939-203ENST00000545784 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
LINC00939-203ENST00000545784 MINPP1Q9UNW1 487 aa12.79□□□□□ -0.36
LINC00939-203ENST00000545784 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
LINC00939-203ENST00000545784 TAF1P21675 1872 aa12.78□□□□□ -0.36
LINC00939-203ENST00000545784 IGHMBP2P38935 993 aaKnown RBP12.78□□□□□ -0.36
LINC00939-203ENST00000545784 PA2G4Q9UQ80 394 aaKnown RBP12.78□□□□□ -0.36
LINC00939-203ENST00000545784 MYH3P11055 1940 aa12.78□□□□□ -0.36
LINC00939-203ENST00000545784 LRRC24Q50LG9 513 aa12.77□□□□□ -0.36
LINC00939-203ENST00000545784 LDHAL6AQ6ZMR3 332 aa12.77□□□□□ -0.36
LINC00939-203ENST00000545784 ATG9AQ7Z3C6 839 aa12.77□□□□□ -0.36
LINC00939-203ENST00000545784 IGHDP01880 384 aa12.77□□□□□ -0.37
LINC00939-203ENST00000545784 GPSM2P81274 684 aa12.77□□□□□ -0.37
LINC00939-203ENST00000545784 GPR162Q16538 588 aa12.77□□□□□ -0.37
LINC00939-203ENST00000545784 CC2D2BQ6DHV5 1058 aa12.77□□□□□ -0.37
LINC00939-203ENST00000545784 MPHOSPH8Q99549 860 aa12.77□□□□□ -0.37
LINC00939-203ENST00000545784 WTIPA6NIX2 430 aaPredicted RBP12.76□□□□□ -0.37
LINC00939-203ENST00000545784 EYA2O00167 538 aa12.76□□□□□ -0.37
LINC00939-203ENST00000545784 TAF7LQ5H9L4 462 aa12.76□□□□□ -0.37
LINC00939-203ENST00000545784 PODXL2Q9NZ53 605 aa12.76□□□□□ -0.37
LINC00939-203ENST00000545784 NFKBIEO00221 500 aa12.76□□□□□ -0.37
LINC00939-203ENST00000545784 FRAT2O75474 233 aaPredicted RBP12.76□□□□□ -0.37
LINC00939-203ENST00000545784 CIAO1O76071 339 aa12.76□□□□□ -0.37
LINC00939-203ENST00000545784 CCDC93Q567U6 631 aa12.76□□□□□ -0.37
LINC00939-203ENST00000545784 SOGA3Q5TF21 947 aa12.76□□□□□ -0.37
LINC00939-203ENST00000545784 RTKN2Q8IZC4 609 aa12.76□□□□□ -0.37
LINC00939-203ENST00000545784 RTFDC1Q9BY42 306 aaPredicted RBP12.76□□□□□ -0.37
LINC00939-203ENST00000545784 FBXO3Q9UK99 471 aa12.76□□□□□ -0.37
LINC00939-203ENST00000545784 CHRNDQ07001 517 aa12.75□□□□□ -0.37
LINC00939-203ENST00000545784 GRIPAP1Q4V328 841 aa12.75□□□□□ -0.37
LINC00939-203ENST00000545784 POLLQ9UGP5 575 aa12.75□□□□□ -0.37
LINC00939-203ENST00000545784 PRELPP51888 382 aa12.74□□□□□ -0.37
LINC00939-203ENST00000545784 ARHGAP27Q6ZUM4 889 aa12.74□□□□□ -0.37
LINC00939-203ENST00000545784 MPNDQ8N594 471 aa12.74□□□□□ -0.37
LINC00939-203ENST00000545784 VGLL2Q8N8G2 317 aa12.74□□□□□ -0.37
LINC00939-203ENST00000545784 HELBQ8NG08 1087 aaPredicted RBP12.74□□□□□ -0.37
LINC00939-203ENST00000545784 PSMD1Q99460 953 aa12.74□□□□□ -0.37
LINC00939-203ENST00000545784 SIL1Q9H173 461 aa12.74□□□□□ -0.37
LINC00939-203ENST00000545784 RWDD1Q9H446 243 aaPredicted RBP12.74□□□□□ -0.37
LINC00939-203ENST00000545784 CNNM1Q9NRU3 951 aa12.74□□□□□ -0.37
LINC00939-203ENST00000545784 GRIN3BO60391 1043 aa12.74□□□□□ -0.37
LINC00939-203ENST00000545784 NSFL1CQ9UNZ2 370 aaKnown RBP12.74□□□□□ -0.37
LINC00939-203ENST00000545784 TAF5LO75529 589 aa12.73□□□□□ -0.37
LINC00939-203ENST00000545784 IL15P40933 162 aaPredicted RBP12.73□□□□□ -0.37
LINC00939-203ENST00000545784 DPP8Q6V1X1 898 aaPredicted RBP12.73□□□□□ -0.37
LINC00939-203ENST00000545784 TBC1D16Q8TBP0 767 aa12.73□□□□□ -0.37
LINC00939-203ENST00000545784 ANKRD2Q9GZV1 360 aa12.73□□□□□ -0.37
LINC00939-203ENST00000545784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.73□□□□□ -0.37
LINC00939-203ENST00000545784 MROH5Q6ZUA9 1318 aa12.73□□□□□ -0.37
LINC00939-203ENST00000545784 LTBP3Q9NS15 1303 aa12.73□□□□□ -0.37
LINC00939-203ENST00000545784 SNAP23O00161 211 aa12.73□□□□□ -0.37
LINC00939-203ENST00000545784 HMMRO75330 724 aa12.73□□□□□ -0.37
LINC00939-203ENST00000545784 SURF6O75683 361 aaKnown RBP12.73□□□□□ -0.37
LINC00939-203ENST00000545784 SASH1O94885 1247 aa12.73□□□□□ -0.37
LINC00939-203ENST00000545784 FKBP4Q02790 459 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC00939-203ENST00000545784 L1TD1Q5T7N2 865 aaKnown RBP12.73□□□□□ -0.37
LINC00939-203ENST00000545784 TMX4Q9H1E5 349 aaPredicted RBP12.73□□□□□ -0.37
LINC00939-203ENST00000545784 ANKIB1Q9P2G1 1089 aa12.73□□□□□ -0.37
LINC00939-203ENST00000545784 BRPF3Q9ULD4 1205 aa12.73□□□□□ -0.37
LINC00939-203ENST00000545784 XDHP47989 1333 aa12.72□□□□□ -0.37
LINC00939-203ENST00000545784 ARFGEF1Q9Y6D6 1849 aa12.72□□□□□ -0.37
LINC00939-203ENST00000545784 LRRC37AA6NMS7 1700 aa12.72□□□□□ -0.37
LINC00939-203ENST00000545784 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
LINC00939-203ENST00000545784 DCTPP1Q9H773 170 aa12.72□□□□□ -0.37
LINC00939-203ENST00000545784 LEMD3Q9Y2U8 911 aa12.72□□□□□ -0.37
LINC00939-203ENST00000545784 IRS2Q9Y4H2 1338 aa12.72□□□□□ -0.37
LINC00939-203ENST00000545784 PDE8BO95263 885 aa12.71□□□□□ -0.37
LINC00939-203ENST00000545784 ATP2B4P23634 1241 aa12.71□□□□□ -0.37
LINC00939-203ENST00000545784 RASSF7Q02833 373 aa12.71□□□□□ -0.37
LINC00939-203ENST00000545784 G3BP1Q13283 466 aaKnown RBP eCLIP12.71□□□□□ -0.37
LINC00939-203ENST00000545784 METTL24Q5JXM2 366 aa12.71□□□□□ -0.37
LINC00939-203ENST00000545784 FAM43AQ8N2R8 423 aa12.71□□□□□ -0.37
LINC00939-203ENST00000545784 TBC1D32Q96NH3 1257 aa12.71□□□□□ -0.37
LINC00939-203ENST00000545784 TAOK3Q9H2K8 898 aa12.71□□□□□ -0.37
LINC00939-203ENST00000545784 GGA1Q9UJY5 639 aa12.71□□□□□ -0.37
LINC00939-203ENST00000545784 FGFR2P21802 821 aa12.71□□□□□ -0.38
LINC00939-203ENST00000545784 TFCP2Q12800 502 aa12.71□□□□□ -0.38
LINC00939-203ENST00000545784 GPR101Q96P66 508 aaPredicted RBP12.71□□□□□ -0.38
LINC00939-203ENST00000545784 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.38
LINC00939-203ENST00000545784 ZNF277Q9NRM2 450 aaPredicted RBP12.71□□□□□ -0.38
LINC00939-203ENST00000545784 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.38
LINC00939-203ENST00000545784 DUOX1Q9NRD9 1551 aa12.7□□□□□ -0.38
LINC00939-203ENST00000545784 LTBP1Q14766 1721 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms