RNA–Protein interactions for RNA: ENST00000536287.2

RHBDL3-203, Transcript of rhomboid like 3, humanhuman

TSL 2 BASIC

Gene RHBDL3, Length 4,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-203ENST00000536287 PAG1Q9NWQ8 432 aa13.71□□□□□ -0.21
RHBDL3-203ENST00000536287 RTL1A6NKG5 1358 aa13.71□□□□□ -0.21
RHBDL3-203ENST00000536287 KIF5BP33176 963 aa13.71□□□□□ -0.22
RHBDL3-203ENST00000536287 TRIM47Q96LD4 638 aa13.71□□□□□ -0.22
RHBDL3-203ENST00000536287 DTNBO60941 627 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 TRIM21P19474 475 aaKnown RBP13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 CTR9Q6PD62 1173 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 IFNKQ9P0W0 207 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 CCDC178Q5BJE1 867 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 ANKIB1Q9P2G1 1089 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 EIF2AK4Q9P2K8 1649 aaKnown RBP13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 MAP3K19Q56UN5 1328 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 SSR1P43307 286 aaKnown RBP13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 IFFO1Q0D2I5 559 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 LRRC59Q96AG4 307 aaKnown RBP13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 UQCRFS1P1P0C7P4 283 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 RTN1Q16799 776 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 DYDC1Q8WWB3 177 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 ALS2CR12Q96Q35 445 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 TEX13AQ9BXU3 409 aaPredicted RBP13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 LMBRD1Q9NUN5 540 aa13.7□□□□□ -0.22
RHBDL3-203ENST00000536287 ITSN2Q9NZM3 1697 aa13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 NBPF7P0C2Y1 421 aaPredicted RBP13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 PYM1Q9BRP8 204 aaKnown RBP13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 VAT1LQ9HCJ6 419 aa13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 BLMP54132 1417 aaPredicted RBP13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 CCDC40Q4G0X9 1142 aa13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 RRAGBQ5VZM2 374 aa13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 STX8Q9UNK0 236 aa13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 AMPD3Q01432 767 aa13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 CCDC96Q2M329 555 aa13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 CALML4Q96GE6 196 aa13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 TIGD1Q96MW7 591 aa13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 CCDC94Q9BW85 323 aaPredicted RBP13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 BCCIPQ9P287 314 aaKnown RBP eCLIP13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 ZFYVE9O95405 1425 aa13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 INSRP06213 1382 aa13.69□□□□□ -0.22
RHBDL3-203ENST00000536287 CFAP43Q8NDM7 1665 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 CHL1O00533 1208 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 KIF20AO95235 890 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 IBSPP21815 317 aaPredicted RBP13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 TCERG1LQ5VWI1 586 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 IQSEC3Q9UPP2 1182 aaPredicted RBP13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 EIF4G3O43432 1585 aaKnown RBP13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 SPATA31E1Q6ZUB1 1445 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 MYO1BO43795 1136 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 SPAG1Q07617 926 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 CRACR2BQ8N4Y2 399 aaPredicted RBP13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 CDC5LQ99459 802 aaKnown RBP13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 NAA15Q9BXJ9 866 aaKnown RBP13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 CTAGE15A4D2H0 777 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 TMCO5BA8MYB1 307 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 SGSM2O43147 1006 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 CTAGE8P0CG41 777 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 PDE4BQ07343 736 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 SYT10Q6XYQ8 523 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 CTAGE6Q86UF2 777 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 CTAGE4Q8IX94 777 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 A0A1B0GVL5 298 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 IL13P35225 146 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 NOP2P46087 812 aaKnown RBP13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 SLC4A8Q2Y0W8 1093 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 RNF187Q5TA31 235 aaPredicted RBP13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 C17orf53Q8N3J3 647 aaPredicted RBP13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 ZFP91Q96JP5 570 aaPredicted RBP13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 SRRTQ9BXP5 876 aaKnown RBP13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 KRT23Q9C075 422 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 TMEM63CQ9P1W3 806 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 RAD50Q92878 1312 aa13.68□□□□□ -0.22
RHBDL3-203ENST00000536287 PNMA6EA0A0J9YXQ4 647 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 ZPR1O75312 459 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 BMP15O95972 392 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 HSPA2P54652 639 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 NFATC2IPQ8NCF5 419 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 ESR2Q92731 530 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 KAT14Q9H8E8 782 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 SNX14Q9Y5W7 946 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 KAT6BQ8WYB5 2073 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 CTAGE1Q96RT6 745 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 SBNO2Q9Y2G9 1366 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 TRIM75PA6NK02 468 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 TFCP2Q12800 502 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 DHX58Q96C10 678 aa13.67□□□□□ -0.22
RHBDL3-203ENST00000536287 GADD45BO75293 160 aaPredicted RBP13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 TUBB4AP04350 444 aa13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 CCDC175P0C221 793 aa13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 EHBP1Q8NDI1 1231 aa13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 BICC1Q9H694 974 aaKnown RBP13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 FAM114A1Q8IWE2 563 aa13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 CNNM2Q9H8M5 875 aa13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 SHANK2Q9UPX8 1470 aa13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 EXOC5O00471 708 aa13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 STX17P56962 302 aa13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 SPTY2D1Q68D10 685 aaPredicted RBP13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 MAP3K5Q99683 1374 aa13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 RMND1Q9NWS8 449 aa13.66□□□□□ -0.22
RHBDL3-203ENST00000536287 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms