RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	GGA1	Q9UJY5	639 aa		10.54	□□□□□ -0.72
CTNNA1-231	ENST00000521941		G3V3G9	751 aa		10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	FZD9	O00144	591 aa		10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	CSF1R	P07333	972 aa		10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	VEGFA	P15692	232 aa	Predicted RBP	10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	CCT4	P50991	539 aa	Known RBP	10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	IFIT5	Q13325	482 aa	Known RBP	10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	DOK7	Q18PE1	504 aa		10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	CCDC57	Q2TAC2	916 aa		10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	DCAF8	Q5TAQ9	597 aa		10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	TBC1D16	Q8TBP0	767 aa		10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	YTHDC1	Q96MU7	727 aa	Known RBP	10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	EYA3	Q99504	573 aa		10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	XDH	P47989	1333 aa		10.53	□□□□□ -0.72
CTNNA1-231	ENST00000521941	SCN4A	P35499	1836 aa		10.52	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ECE2	O60344	883 aa		10.52	□□□□□ -0.73
CTNNA1-231	ENST00000521941	RAD17	O75943	681 aa		10.52	□□□□□ -0.73
CTNNA1-231	ENST00000521941	UBTFL1	P0CB47	393 aa	Predicted RBP	10.52	□□□□□ -0.73
CTNNA1-231	ENST00000521941	BRPF1	P55201	1214 aa	Predicted RBP	10.52	□□□□□ -0.73
CTNNA1-231	ENST00000521941	EAPP	Q56P03	285 aa	Predicted RBP	10.52	□□□□□ -0.73
CTNNA1-231	ENST00000521941	BSDC1	Q9NW68	430 aa	Predicted RBP	10.52	□□□□□ -0.73
CTNNA1-231	ENST00000521941	MINPP1	Q9UNW1	487 aa		10.52	□□□□□ -0.73
CTNNA1-231	ENST00000521941	WTIP	A6NIX2	430 aa	Predicted RBP	10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	YDJC	A8MPS7	323 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	POTEC	B2RU33	542 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	IPO8	O15397	1037 aa	Known RBP	10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	PLIN1	O60240	522 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	TOMM70	O94826	608 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	TRIM27	P14373	513 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ATP2B4	P23634	1241 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	LMOD1	P29536	600 aa	Predicted RBP	10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	KCNJ4	P48050	445 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	CHRND	Q07001	517 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	CIAPIN1	Q6FI81	312 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ATF7IP	Q6VMQ6	1270 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	GPC2	Q8N158	579 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	HELB	Q8NG08	1087 aa	Predicted RBP	10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	KAZALD1	Q96I82	304 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	USP44	Q9H0E7	712 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	VPS33B	Q9H267	617 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	CNNM1	Q9NRU3	951 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	PODXL2	Q9NZ53	605 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ZNRF3	Q9ULT6	936 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	UTY	O14607	1347 aa		10.51	□□□□□ -0.73
CTNNA1-231	ENST00000521941	SCN9A	Q15858	1988 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	IQCA1L	A6NCM1	817 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	TAF5L	O75529	589 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	POTEI	P0CG38	1075 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	POTEJ	P0CG39	1038 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	CXCL9	Q07325	125 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ZKSCAN2	Q63HK3	967 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	LDHAL6A	Q6ZMR3	332 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	FTSJ3	Q8IY81	847 aa	Known RBP	10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ANKRD44	Q8N8A2	993 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	FBXW7	Q969H0	707 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	MEIS3	Q99687	375 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	HACL1	Q9UJ83	578 aa		10.5	□□□□□ -0.73
CTNNA1-231	ENST00000521941	SNAP23	O00161	211 aa		10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	KLRK1	P26718	216 aa		10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	EPHX2	P34913	555 aa		10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	GMPS	P49915	693 aa	Predicted RBP	10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	KLHDC4	Q8TBB5	520 aa		10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	RBM46	Q8TBY0	533 aa	Known RBP	10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ARHGAP45	Q92619	1136 aa		10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	L3MBTL3	Q96JM7	780 aa	Predicted RBP	10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	PUS3	Q9BZE2	481 aa	Known RBP	10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ANKRD2	Q9GZV1	360 aa		10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	CLEC11A	Q9Y240	323 aa		10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	LRRFIP2	Q9Y608	721 aa	Known RBP	10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	MED23	Q9ULK4	1368 aa		10.49	□□□□□ -0.73
CTNNA1-231	ENST00000521941	PSMD14	O00487	310 aa		10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	SCNN1D	P51172	638 aa		10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	TNIP1	Q15025	636 aa		10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	RABL6	Q3YEC7	729 aa	Predicted RBP	10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	INTS3	Q68E01	1043 aa	Known RBP	10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	TMEM57	Q8N5G2	664 aa		10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	SMC1B	Q8NDV3	1235 aa		10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	KCNQ5	Q9NR82	932 aa		10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	LEMD3	Q9Y2U8	911 aa		10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	PSME4	Q14997	1843 aa		10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ZNF804B	A4D1E1	1349 aa		10.48	□□□□□ -0.73
CTNNA1-231	ENST00000521941	SHTN1	A0MZ66	631 aa		10.47	□□□□□ -0.73
CTNNA1-231	ENST00000521941	EPS15	P42566	896 aa		10.47	□□□□□ -0.73
CTNNA1-231	ENST00000521941	LRRC24	Q50LG9	513 aa		10.47	□□□□□ -0.73
CTNNA1-231	ENST00000521941	TXNRD3	Q86VQ6	643 aa		10.47	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ITPRIP	Q8IWB1	547 aa		10.47	□□□□□ -0.73
CTNNA1-231	ENST00000521941	METTL24	Q5JXM2	366 aa		10.46	□□□□□ -0.73
CTNNA1-231	ENST00000521941	DZIP1L	Q8IYY4	767 aa	Known RBP	10.46	□□□□□ -0.73
CTNNA1-231	ENST00000521941	SIL1	Q9H173	461 aa		10.46	□□□□□ -0.73
CTNNA1-231	ENST00000521941	GPRC5D	Q9NZD1	345 aa		10.46	□□□□□ -0.73
CTNNA1-231	ENST00000521941	ADAMTSL1	Q8N6G6	1762 aa		10.46	□□□□□ -0.74
CTNNA1-231	ENST00000521941	ZNF646	O15015	1829 aa	Predicted RBP	10.45	□□□□□ -0.74
CTNNA1-231	ENST00000521941	GNAI3	P08754	354 aa		10.45	□□□□□ -0.74
CTNNA1-231	ENST00000521941	RLBP1	P12271	317 aa		10.45	□□□□□ -0.74
CTNNA1-231	ENST00000521941	HSPA6	P17066	643 aa		10.45	□□□□□ -0.74
CTNNA1-231	ENST00000521941	FSTL1	Q12841	308 aa		10.45	□□□□□ -0.74
CTNNA1-231	ENST00000521941	CHADL	Q6NUI6	762 aa		10.45	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms