RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 PRR5LQ6MZQ0 368 aa11.23□□□□□ -0.61
NR1I3-228ENST00000511676 KIF1BPQ96EK5 621 aa11.23□□□□□ -0.61
NR1I3-228ENST00000511676 BEGAINQ9BUH8 593 aa11.23□□□□□ -0.61
NR1I3-228ENST00000511676 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
NR1I3-228ENST00000511676 BICC1Q9H694 974 aaKnown RBP11.23□□□□□ -0.61
NR1I3-228ENST00000511676 COPRSQ9NQ92 184 aa11.23□□□□□ -0.61
NR1I3-228ENST00000511676 TBC1D2BQ9UPU7 963 aa11.23□□□□□ -0.61
NR1I3-228ENST00000511676 BRCA1P38398 1863 aaKnown RBP11.23□□□□□ -0.61
NR1I3-228ENST00000511676 ATP5J2-PTCD1G3V325 749 aa11.22□□□□□ -0.61
NR1I3-228ENST00000511676 LMOD1P29536 600 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-228ENST00000511676 FKBP4Q02790 459 aaKnown RBP eCLIP11.22□□□□□ -0.61
NR1I3-228ENST00000511676 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
NR1I3-228ENST00000511676 ZBTB12Q9Y330 459 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-228ENST00000511676 NUP98P52948 1817 aa11.21□□□□□ -0.61
NR1I3-228ENST00000511676 RTL9Q8NET4 1388 aa11.21□□□□□ -0.61
NR1I3-228ENST00000511676 PDE4AP27815 886 aa11.21□□□□□ -0.61
NR1I3-228ENST00000511676 RGS3P49796 1198 aa11.21□□□□□ -0.61
NR1I3-228ENST00000511676 EIF6P56537 245 aaKnown RBP11.21□□□□□ -0.61
NR1I3-228ENST00000511676 MAP2K1Q02750 393 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-228ENST00000511676 RASSF7Q02833 373 aa11.21□□□□□ -0.61
NR1I3-228ENST00000511676 PRPF40BQ6NWY9 871 aaKnown RBP11.21□□□□□ -0.61
NR1I3-228ENST00000511676 L3MBTL3Q96JM7 780 aaPredicted RBP11.21□□□□□ -0.61
NR1I3-228ENST00000511676 LNPKQ9C0E8 428 aa11.21□□□□□ -0.61
NR1I3-228ENST00000511676 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
NR1I3-228ENST00000511676 PRDM10Q9NQV6 1147 aa11.21□□□□□ -0.61
NR1I3-228ENST00000511676 HACL1Q9UJ83 578 aa11.21□□□□□ -0.61
NR1I3-228ENST00000511676 NIP7Q9Y221 180 aaKnown RBP eCLIP11.21□□□□□ -0.61
NR1I3-228ENST00000511676 CLEC11AQ9Y240 323 aa11.21□□□□□ -0.61
NR1I3-228ENST00000511676 LAMB2P55268 1798 aa11.21□□□□□ -0.62
NR1I3-228ENST00000511676 WDR90Q96KV7 1748 aa11.21□□□□□ -0.62
NR1I3-228ENST00000511676 RIC1Q4ADV7 1423 aa11.2□□□□□ -0.62
NR1I3-228ENST00000511676 SALL3Q9BXA9 1300 aa11.2□□□□□ -0.62
NR1I3-228ENST00000511676 TMEM88BA6NKF7 163 aa11.2□□□□□ -0.62
NR1I3-228ENST00000511676 SURF6O75683 361 aaKnown RBP11.2□□□□□ -0.62
NR1I3-228ENST00000511676 CSF1RP07333 972 aa11.2□□□□□ -0.62
NR1I3-228ENST00000511676 ECE1P42892 770 aa11.2□□□□□ -0.62
NR1I3-228ENST00000511676 CTCFP49711 727 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-228ENST00000511676 FOXO4P98177 505 aa11.2□□□□□ -0.62
NR1I3-228ENST00000511676 HLFQ16534 295 aa11.2□□□□□ -0.62
NR1I3-228ENST00000511676 GPC2Q8N158 579 aa11.2□□□□□ -0.62
NR1I3-228ENST00000511676 SUPT20HQ8NEM7 779 aa11.2□□□□□ -0.62
NR1I3-228ENST00000511676 BACH2Q9BYV9 841 aa11.2□□□□□ -0.62
NR1I3-228ENST00000511676 STAP2Q9UGK3 403 aa11.2□□□□□ -0.62
NR1I3-228ENST00000511676 UBN2Q6ZU65 1347 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 KIAA1551Q9HCM1 1747 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 KLRG2A4D1S0 409 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-228ENST00000511676 NFKBIEO00221 500 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 PDE8AO60658 829 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 CIAO1O76071 339 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 HSPA1AP0DMV8 641 aaKnown RBP11.19□□□□□ -0.62
NR1I3-228ENST00000511676 HSPA1BP0DMV9 641 aaKnown RBP11.19□□□□□ -0.62
NR1I3-228ENST00000511676 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-228ENST00000511676 PLEKHM2Q8IWE5 1019 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 RHPN1Q8TCX5 695 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 RPGRQ92834 1020 aaKnown RBP11.19□□□□□ -0.62
NR1I3-228ENST00000511676 RBM17Q96I25 401 aaKnown RBP11.19□□□□□ -0.62
NR1I3-228ENST00000511676 PSMD1Q99460 953 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 UTP14AQ9BVJ6 771 aaKnown RBP11.19□□□□□ -0.62
NR1I3-228ENST00000511676 GPR108Q9NPR9 543 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 TSHZ2Q9NRE2 1034 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 SBF1O95248 1867 aa11.19□□□□□ -0.62
NR1I3-228ENST00000511676 NRXN2Q9P2S2 1712 aa11.18□□□□□ -0.62
NR1I3-228ENST00000511676 TTC41PQ6P2S7 1318 aa11.18□□□□□ -0.62
NR1I3-228ENST00000511676 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
NR1I3-228ENST00000511676 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.62
NR1I3-228ENST00000511676 LMBR1LQ6UX01 489 aa11.18□□□□□ -0.62
NR1I3-228ENST00000511676 CLASRPQ8N2M8 674 aaKnown RBP11.18□□□□□ -0.62
NR1I3-228ENST00000511676 TRMT112Q9UI30 125 aaKnown RBP11.18□□□□□ -0.62
NR1I3-228ENST00000511676 NTSR2O95665 410 aa11.17□□□□□ -0.62
NR1I3-228ENST00000511676 CTSWP56202 376 aa11.17□□□□□ -0.62
NR1I3-228ENST00000511676 C8orf34Q49A92 452 aa11.17□□□□□ -0.62
NR1I3-228ENST00000511676 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
NR1I3-228ENST00000511676 TICAM2Q86XR7 235 aa11.17□□□□□ -0.62
NR1I3-228ENST00000511676 GPATCH3Q96I76 525 aa11.17□□□□□ -0.62
NR1I3-228ENST00000511676 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-228ENST00000511676 CA12O43570 354 aa11.16□□□□□ -0.62
NR1I3-228ENST00000511676 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-228ENST00000511676 MX1P20591 662 aa11.16□□□□□ -0.62
NR1I3-228ENST00000511676 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-228ENST00000511676 IARSP41252 1262 aaKnown RBP11.16□□□□□ -0.62
NR1I3-228ENST00000511676 PDE1AP54750 535 aa11.16□□□□□ -0.62
NR1I3-228ENST00000511676 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-228ENST00000511676 CCDC57Q2TAC2 916 aa11.16□□□□□ -0.62
NR1I3-228ENST00000511676 DEFB115Q30KQ5 88 aa11.16□□□□□ -0.62
NR1I3-228ENST00000511676 SLC10A5Q5PT55 438 aa11.16□□□□□ -0.62
NR1I3-228ENST00000511676 TTC22Q5TAA0 569 aa11.16□□□□□ -0.62
NR1I3-228ENST00000511676 COL13A1Q5TAT6 717 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-228ENST00000511676 TMC4Q7Z404 712 aa11.16□□□□□ -0.62
NR1I3-228ENST00000511676 FAM89AQ96GI7 184 aa11.16□□□□□ -0.62
NR1I3-228ENST00000511676 NLRP3Q96P20 1036 aa11.16□□□□□ -0.62
NR1I3-228ENST00000511676 TAF1DQ9H5J8 278 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-228ENST00000511676 ERC2O15083 957 aa11.15□□□□□ -0.62
NR1I3-228ENST00000511676 GPTP24298 496 aa11.15□□□□□ -0.62
NR1I3-228ENST00000511676 EPHX2P34913 555 aa11.15□□□□□ -0.62
NR1I3-228ENST00000511676 IFIT5Q13325 482 aaKnown RBP11.15□□□□□ -0.62
NR1I3-228ENST00000511676 EAPPQ56P03 285 aaPredicted RBP11.15□□□□□ -0.62
NR1I3-228ENST00000511676 USP50Q70EL3 339 aaPredicted RBP11.15□□□□□ -0.62
NR1I3-228ENST00000511676 TTLL11Q8NHH1 800 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms