RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 DBF4Q9UBU7 674 aaPredicted RBP11.12□□□□□ -0.63
PRKCB-208ENST00000487674 ZNRF3Q9ULT6 936 aa11.12□□□□□ -0.63
PRKCB-208ENST00000487674 TAF1P21675 1872 aa11.12□□□□□ -0.63
PRKCB-208ENST00000487674 CDHR2Q9BYE9 1310 aa11.11□□□□□ -0.63
PRKCB-208ENST00000487674 FOXN1O15353 648 aa11.11□□□□□ -0.63
PRKCB-208ENST00000487674 KIAA2012Q0VF49 1180 aa11.11□□□□□ -0.63
PRKCB-208ENST00000487674 MPNDQ8N594 471 aa11.11□□□□□ -0.63
PRKCB-208ENST00000487674 CFAP44Q96MT7 982 aa11.11□□□□□ -0.63
PRKCB-208ENST00000487674 ABT1Q9ULW3 272 aaKnown RBP11.11□□□□□ -0.63
PRKCB-208ENST00000487674 ADAMTS8Q9UP79 889 aa11.11□□□□□ -0.63
PRKCB-208ENST00000487674 CTCFP49711 727 aaPredicted RBP11.1□□□□□ -0.63
PRKCB-208ENST00000487674 CXCL9Q07325 125 aa11.1□□□□□ -0.63
PRKCB-208ENST00000487674 DEFB115Q30KQ5 88 aa11.1□□□□□ -0.63
PRKCB-208ENST00000487674 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
PRKCB-208ENST00000487674 ISCA1Q9BUE6 129 aa11.1□□□□□ -0.63
PRKCB-208ENST00000487674 PRDM10Q9NQV6 1147 aa11.1□□□□□ -0.63
PRKCB-208ENST00000487674 ADARB2Q9NS39 739 aaKnown RBP11.1□□□□□ -0.63
PRKCB-208ENST00000487674 HYPKQ9NX55 129 aa11.1□□□□□ -0.63
PRKCB-208ENST00000487674 GMPSP49915 693 aaPredicted RBP11.09□□□□□ -0.63
PRKCB-208ENST00000487674 DUSP27Q5VZP5 1158 aa11.09□□□□□ -0.63
PRKCB-208ENST00000487674 CIAPIN1Q6FI81 312 aa11.09□□□□□ -0.63
PRKCB-208ENST00000487674 MBIPQ9NS73 344 aa11.09□□□□□ -0.63
PRKCB-208ENST00000487674 WBP1LQ9NX94 342 aa11.09□□□□□ -0.63
PRKCB-208ENST00000487674 WDR33Q9C0J8 1336 aaKnown RBP11.09□□□□□ -0.63
PRKCB-208ENST00000487674 COL4A1P02462 1669 aa11.08□□□□□ -0.64
PRKCB-208ENST00000487674 ST18O60284 1047 aa11.08□□□□□ -0.64
PRKCB-208ENST00000487674 CALD1Q05682 793 aaKnown RBP11.08□□□□□ -0.64
PRKCB-208ENST00000487674 TNIP1Q15025 636 aa11.08□□□□□ -0.64
PRKCB-208ENST00000487674 SF3B3Q15393 1217 aaKnown RBP11.08□□□□□ -0.64
PRKCB-208ENST00000487674 OCEL1Q9H607 264 aa11.08□□□□□ -0.64
PRKCB-208ENST00000487674 PRKRIP1Q9H875 184 aaPredicted RBP11.08□□□□□ -0.64
PRKCB-208ENST00000487674 IFT57Q9NWB7 429 aa11.08□□□□□ -0.64
PRKCB-208ENST00000487674 ATP5J2-PTCD1G3V325 749 aa11.07□□□□□ -0.64
PRKCB-208ENST00000487674 TRAF5O00463 557 aa11.07□□□□□ -0.64
PRKCB-208ENST00000487674 ZNF853P0CG23 659 aa11.07□□□□□ -0.64
PRKCB-208ENST00000487674 ECE1P42892 770 aa11.07□□□□□ -0.64
PRKCB-208ENST00000487674 MAP2K1Q02750 393 aaPredicted RBP11.07□□□□□ -0.64
PRKCB-208ENST00000487674 GOLGA2Q08379 1002 aa11.07□□□□□ -0.64
PRKCB-208ENST00000487674 TRIM28Q13263 835 aaKnown RBP11.07□□□□□ -0.64
PRKCB-208ENST00000487674 CDAN1Q8IWY9 1227 aa11.07□□□□□ -0.64
PRKCB-208ENST00000487674 ZNF428Q96B54 188 aa11.07□□□□□ -0.64
PRKCB-208ENST00000487674 FAM89AQ96GI7 184 aa11.07□□□□□ -0.64
PRKCB-208ENST00000487674 BCL2L13Q9BXK5 485 aa11.07□□□□□ -0.64
PRKCB-208ENST00000487674 YDJCA8MPS7 323 aa11.06□□□□□ -0.64
PRKCB-208ENST00000487674 RAD17O75943 681 aa11.06□□□□□ -0.64
PRKCB-208ENST00000487674 GNAI1P63096 354 aa11.06□□□□□ -0.64
PRKCB-208ENST00000487674 FMR1Q06787 632 aaKnown RBP eCLIP11.06□□□□□ -0.643e-6■■□□□ 13.6
PRKCB-208ENST00000487674 CST9Q5W186 159 aa11.06□□□□□ -0.64
PRKCB-208ENST00000487674 ZC3H15Q8WU90 426 aaKnown RBP11.06□□□□□ -0.64
PRKCB-208ENST00000487674 CELF1Q92879 486 aaKnown RBP11.06□□□□□ -0.64
PRKCB-208ENST00000487674 CAPNS2Q96L46 248 aa11.06□□□□□ -0.64
PRKCB-208ENST00000487674 PGAP2Q9UHJ9 254 aa11.06□□□□□ -0.64
PRKCB-208ENST00000487674 TLL2Q9Y6L7 1015 aa11.06□□□□□ -0.64
PRKCB-208ENST00000487674 IRS4O14654 1257 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-208ENST00000487674 APAF1O14727 1248 aa11.05□□□□□ -0.64
PRKCB-208ENST00000487674 HSPA8P11142 646 aaKnown RBP11.05□□□□□ -0.64
PRKCB-208ENST00000487674 HSP90B1P14625 803 aaKnown RBP11.05□□□□□ -0.64
PRKCB-208ENST00000487674 LBX1P52954 281 aa11.05□□□□□ -0.64
PRKCB-208ENST00000487674 WASHC4Q2M389 1173 aa11.05□□□□□ -0.64
PRKCB-208ENST00000487674 PAXIP1Q6ZW49 1069 aaPredicted RBP11.05□□□□□ -0.64
PRKCB-208ENST00000487674 RIC3Q7Z5B4 369 aa11.05□□□□□ -0.64
PRKCB-208ENST00000487674 TRPM4Q8TD43 1214 aa11.05□□□□□ -0.64
PRKCB-208ENST00000487674 NSFL1CQ9UNZ2 370 aaKnown RBP11.05□□□□□ -0.64
PRKCB-208ENST00000487674 CELF2O95319 508 aaKnown RBP11.04□□□□□ -0.64
PRKCB-208ENST00000487674 GPSM2P81274 684 aa11.04□□□□□ -0.64
PRKCB-208ENST00000487674 RTL5Q5HYW3 569 aaPredicted RBP11.04□□□□□ -0.64
PRKCB-208ENST00000487674 CYP4F22Q6NT55 531 aa11.04□□□□□ -0.64
PRKCB-208ENST00000487674 MICALL2Q8IY33 904 aa11.04□□□□□ -0.64
PRKCB-208ENST00000487674 ZBTB38Q8NAP3 1195 aaPredicted RBP11.04□□□□□ -0.64
PRKCB-208ENST00000487674 EYA3Q99504 573 aa11.04□□□□□ -0.64
PRKCB-208ENST00000487674 GLIS2Q9BZE0 524 aaPredicted RBP11.04□□□□□ -0.64
PRKCB-208ENST00000487674 CNOT7Q9UIV1 285 aaKnown RBP11.04□□□□□ -0.64
PRKCB-208ENST00000487674 SCN9AQ15858 1988 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 PSME4Q14997 1843 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 C6orf229H3BNL8 230 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 H7C1D1 291 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 PSMD14O00487 310 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 RPS12P25398 132 aaKnown RBP11.03□□□□□ -0.64
PRKCB-208ENST00000487674 HIRAP54198 1017 aaPredicted RBP11.03□□□□□ -0.64
PRKCB-208ENST00000487674 RPS8P62241 208 aaKnown RBP11.03□□□□□ -0.64
PRKCB-208ENST00000487674 GRM1Q13255 1194 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 SAPCD2Q86UD0 394 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 IFNLR1Q8IU57 520 aaPredicted RBP11.03□□□□□ -0.64
PRKCB-208ENST00000487674 CCDC191Q8NCU4 936 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 DPF2Q92785 391 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 HHIPL1Q96JK4 782 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 GPR101Q96P66 508 aaPredicted RBP11.03□□□□□ -0.64
PRKCB-208ENST00000487674 BEGAINQ9BUH8 593 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 CHMP4AQ9BY43 222 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 PHAXQ9H814 394 aaKnown RBP11.03□□□□□ -0.64
PRKCB-208ENST00000487674 DBNDD1Q9H9R9 158 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 POLLQ9UGP5 575 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 RTL9Q8NET4 1388 aa11.03□□□□□ -0.64
PRKCB-208ENST00000487674 MYH3P11055 1940 aa11.02□□□□□ -0.65
PRKCB-208ENST00000487674 SHTN1A0MZ66 631 aa11.02□□□□□ -0.65
PRKCB-208ENST00000487674 ELL2O00472 640 aaPredicted RBP11.02□□□□□ -0.65
PRKCB-208ENST00000487674 RIMBP2O15034 1052 aa11.02□□□□□ -0.65
PRKCB-208ENST00000487674 ECE2O60344 883 aa11.02□□□□□ -0.65
PRKCB-208ENST00000487674 DDX58O95786 925 aaKnown RBP11.02□□□□□ -0.65
PRKCB-208ENST00000487674 PCCAP05165 728 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms