RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 PSMD1Q99460 953 aa9.87□□□□□ -0.83
MACF1-220ENST00000485063 NOB1Q9ULX3 412 aaKnown RBP9.87□□□□□ -0.83
MACF1-220ENST00000485063 IARSP41252 1262 aaKnown RBP9.86□□□□□ -0.83
MACF1-220ENST00000485063 CCT4P50991 539 aaKnown RBP9.86□□□□□ -0.83
MACF1-220ENST00000485063 DPP8Q6V1X1 898 aaPredicted RBP9.86□□□□□ -0.83
MACF1-220ENST00000485063 TTLL11Q8NHH1 800 aa9.86□□□□□ -0.83
MACF1-220ENST00000485063 ZNF526Q8TF50 670 aaPredicted RBP9.86□□□□□ -0.83
MACF1-220ENST00000485063 JDP2Q8WYK2 163 aa9.86□□□□□ -0.83
MACF1-220ENST00000485063 ARHGAP45Q92619 1136 aa9.86□□□□□ -0.83
MACF1-220ENST00000485063 CCDC85AQ96PX6 553 aaPredicted RBP9.86□□□□□ -0.83
MACF1-220ENST00000485063 PLA2G12BQ9BX93 195 aa9.86□□□□□ -0.83
MACF1-220ENST00000485063 VPS33BQ9H267 617 aa9.86□□□□□ -0.83
MACF1-220ENST00000485063 SPEF2Q9C093 1822 aa9.86□□□□□ -0.83
MACF1-220ENST00000485063 IGHMBP2P38935 993 aaKnown RBP9.85□□□□□ -0.83
MACF1-220ENST00000485063 OLFM4Q6UX06 510 aa9.85□□□□□ -0.83
MACF1-220ENST00000485063 FRAT1Q92837 279 aaPredicted RBP9.85□□□□□ -0.83
MACF1-220ENST00000485063 CELF1Q92879 486 aaKnown RBP9.85□□□□□ -0.83
MACF1-220ENST00000485063 SEC31BQ9NQW1 1179 aa9.85□□□□□ -0.83
MACF1-220ENST00000485063 ZNF277Q9NRM2 450 aaPredicted RBP9.85□□□□□ -0.83
MACF1-220ENST00000485063 HDAC5Q9UQL6 1122 aa9.85□□□□□ -0.83
MACF1-220ENST00000485063 CHMP3Q9Y3E7 222 aa9.85□□□□□ -0.83
MACF1-220ENST00000485063 LRRC37AA6NMS7 1700 aa9.85□□□□□ -0.83
MACF1-220ENST00000485063 ANKRD18BA2A2Z9 1011 aa9.84□□□□□ -0.83
MACF1-220ENST00000485063 CASP7P55210 303 aa9.84□□□□□ -0.83
MACF1-220ENST00000485063 IFIT5Q13325 482 aaKnown RBP9.84□□□□□ -0.83
MACF1-220ENST00000485063 CCDC57Q2TAC2 916 aa9.84□□□□□ -0.83
MACF1-220ENST00000485063 TAF7LQ5H9L4 462 aa9.84□□□□□ -0.83
MACF1-220ENST00000485063 LARGE2Q8N3Y3 721 aa9.84□□□□□ -0.83
MACF1-220ENST00000485063 EYA3Q99504 573 aa9.84□□□□□ -0.83
MACF1-220ENST00000485063 MPHOSPH8Q99549 860 aa9.84□□□□□ -0.83
MACF1-220ENST00000485063 GREM2Q9H772 168 aa9.84□□□□□ -0.83
MACF1-220ENST00000485063 ANKIB1Q9P2G1 1089 aa9.84□□□□□ -0.83
MACF1-220ENST00000485063 NSFL1CQ9UNZ2 370 aaKnown RBP9.84□□□□□ -0.83
MACF1-220ENST00000485063 RTL9Q8NET4 1388 aa9.84□□□□□ -0.83
MACF1-220ENST00000485063 GLTPD2A6NH11 291 aa9.83□□□□□ -0.84
MACF1-220ENST00000485063 G3V3G9 751 aa9.83□□□□□ -0.84
MACF1-220ENST00000485063 C6orf229H3BNL8 230 aa9.83□□□□□ -0.84
MACF1-220ENST00000485063 PPIP5K2O43314 1243 aa9.83□□□□□ -0.84
MACF1-220ENST00000485063 CSF1RP07333 972 aa9.83□□□□□ -0.84
MACF1-220ENST00000485063 ITGA6P23229 1130 aa9.83□□□□□ -0.84
MACF1-220ENST00000485063 PRELPP51888 382 aa9.83□□□□□ -0.84
MACF1-220ENST00000485063 EIF6P56537 245 aaKnown RBP9.83□□□□□ -0.84
MACF1-220ENST00000485063 DCAF8Q5TAQ9 597 aa9.83□□□□□ -0.84
MACF1-220ENST00000485063 ZKSCAN2Q63HK3 967 aa9.83□□□□□ -0.84
MACF1-220ENST00000485063 NIM1KQ8IY84 436 aa9.83□□□□□ -0.84
MACF1-220ENST00000485063 C16orf71Q8IYS4 520 aaPredicted RBP9.83□□□□□ -0.84
MACF1-220ENST00000485063 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
MACF1-220ENST00000485063 BCAR3O75815 825 aa9.82□□□□□ -0.84
MACF1-220ENST00000485063 NBPF7P0C2Y1 421 aaPredicted RBP9.82□□□□□ -0.84
MACF1-220ENST00000485063 TIE1P35590 1138 aa9.82□□□□□ -0.84
MACF1-220ENST00000485063 FOXO4P98177 505 aa9.82□□□□□ -0.84
MACF1-220ENST00000485063 AOC3Q16853 763 aa9.82□□□□□ -0.84
MACF1-220ENST00000485063 WASHC4Q2M389 1173 aa9.82□□□□□ -0.84
MACF1-220ENST00000485063 FAM161AQ3B820 660 aa9.82□□□□□ -0.84
MACF1-220ENST00000485063 LMBR1LQ6UX01 489 aa9.82□□□□□ -0.84
MACF1-220ENST00000485063 ATF7IPQ6VMQ6 1270 aa9.82□□□□□ -0.84
MACF1-220ENST00000485063 RTFDC1Q9BY42 306 aaPredicted RBP9.82□□□□□ -0.84
MACF1-220ENST00000485063 BSDC1Q9NW68 430 aaPredicted RBP9.82□□□□□ -0.84
MACF1-220ENST00000485063 SNED1Q8TER0 1413 aa9.82□□□□□ -0.84
MACF1-220ENST00000485063 UTYO14607 1347 aa9.82□□□□□ -0.84
MACF1-220ENST00000485063 UBTFL1P0CB47 393 aaPredicted RBP9.81□□□□□ -0.84
MACF1-220ENST00000485063 ATN1P54259 1190 aaPredicted RBP9.81□□□□□ -0.84
MACF1-220ENST00000485063 GPSM2P81274 684 aa9.81□□□□□ -0.84
MACF1-220ENST00000485063 FTSJ3Q8IY81 847 aaKnown RBP9.81□□□□□ -0.84
MACF1-220ENST00000485063 FAM163AQ96GL9 167 aaPredicted RBP9.81□□□□□ -0.84
MACF1-220ENST00000485063 SUCLG2Q96I99 432 aa9.81□□□□□ -0.84
MACF1-220ENST00000485063 ZC3H12CQ9C0D7 883 aaKnown RBP9.81□□□□□ -0.84
MACF1-220ENST00000485063 ANKRD2Q9GZV1 360 aa9.81□□□□□ -0.84
MACF1-220ENST00000485063 USP44Q9H0E7 712 aa9.81□□□□□ -0.84
MACF1-220ENST00000485063 PODXL2Q9NZ53 605 aa9.81□□□□□ -0.84
MACF1-220ENST00000485063 GGA1Q9UJY5 639 aa9.81□□□□□ -0.84
MACF1-220ENST00000485063 GOLGB1Q14789 3259 aaKnown RBP9.81□□□□□ -0.84
MACF1-220ENST00000485063 XDHP47989 1333 aa9.81□□□□□ -0.84
MACF1-220ENST00000485063 FZD9O00144 591 aa9.8□□□□□ -0.84
MACF1-220ENST00000485063 UFL1O94874 794 aa9.8□□□□□ -0.84
MACF1-220ENST00000485063 GNAI3P08754 354 aa9.8□□□□□ -0.84
MACF1-220ENST00000485063 MS4A1P11836 297 aa9.8□□□□□ -0.84
MACF1-220ENST00000485063 TRIM27P14373 513 aa9.8□□□□□ -0.84
MACF1-220ENST00000485063 VEGFAP15692 232 aaPredicted RBP9.8□□□□□ -0.84
MACF1-220ENST00000485063 ATP2B4P23634 1241 aa9.8□□□□□ -0.84
MACF1-220ENST00000485063 KIAA2012Q0VF49 1180 aa9.8□□□□□ -0.84
MACF1-220ENST00000485063 INTS3Q68E01 1043 aaKnown RBP9.8□□□□□ -0.84
MACF1-220ENST00000485063 RASEFQ8IZ41 740 aa9.8□□□□□ -0.84
MACF1-220ENST00000485063 PLCD3Q8N3E9 789 aa9.8□□□□□ -0.84
MACF1-220ENST00000485063 CLUAP1Q96AJ1 413 aa9.8□□□□□ -0.84
MACF1-220ENST00000485063 BICC1Q9H694 974 aaKnown RBP9.8□□□□□ -0.84
MACF1-220ENST00000485063 RRAGCQ9HB90 399 aa9.8□□□□□ -0.84
MACF1-220ENST00000485063 WDR90Q96KV7 1748 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 IQCA1LA6NCM1 817 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 RIMBP2O15034 1052 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 MAP3K13O43283 966 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 DDNO94850 711 aaPredicted RBP9.79□□□□□ -0.84
MACF1-220ENST00000485063 KCNJ4P48050 445 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 EPHA10Q5JZY3 1008 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 LDHAL6AQ6ZMR3 332 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 GPC2Q8N158 579 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 TBC1D16Q8TBP0 767 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 YTHDC1Q96MU7 727 aaKnown RBP9.79□□□□□ -0.84
MACF1-220ENST00000485063 NMRK2Q9NPI5 230 aa9.79□□□□□ -0.84
MACF1-220ENST00000485063 SCUBE2Q9NQ36 999 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms