RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 SULF1Q8IWU6 871 aa14.31□□□□□ -0.12
SMARCC1-205ENST00000483847 TBC1D16Q8TBP0 767 aa14.3□□□□□ -0.12
SMARCC1-205ENST00000483847 FAM89AQ96GI7 184 aa14.3□□□□□ -0.12
SMARCC1-205ENST00000483847 VIL1P09327 827 aaKnown RBP14.29□□□□□ -0.12
SMARCC1-205ENST00000483847 SF3B3Q15393 1217 aaKnown RBP14.29□□□□□ -0.12
SMARCC1-205ENST00000483847 KRT24Q2M2I5 525 aa14.29□□□□□ -0.12
SMARCC1-205ENST00000483847 RTL5Q5HYW3 569 aaPredicted RBP14.29□□□□□ -0.12
SMARCC1-205ENST00000483847 ANGEL2Q5VTE6 544 aaKnown RBP14.29□□□□□ -0.12
SMARCC1-205ENST00000483847 MOB2Q70IA6 237 aa14.29□□□□□ -0.12
SMARCC1-205ENST00000483847 SCAF8Q9UPN6 1271 aaKnown RBP14.29□□□□□ -0.12
SMARCC1-205ENST00000483847 MAPK8IP3Q9UPT6 1336 aa14.29□□□□□ -0.12
SMARCC1-205ENST00000483847 TBC1D8O95759 1140 aa14.28□□□□□ -0.12
SMARCC1-205ENST00000483847 SCARF1Q14162 830 aa14.28□□□□□ -0.12
SMARCC1-205ENST00000483847 ZNF296Q8WUU4 475 aaPredicted RBP14.28□□□□□ -0.12
SMARCC1-205ENST00000483847 EYA3Q99504 573 aa14.28□□□□□ -0.12
SMARCC1-205ENST00000483847 PAPPA2Q9BXP8 1791 aa14.28□□□□□ -0.12
SMARCC1-205ENST00000483847 ATP5J2-PTCD1G3V325 749 aa14.27□□□□□ -0.13
SMARCC1-205ENST00000483847 ZNF280AP59817 542 aaPredicted RBP14.27□□□□□ -0.13
SMARCC1-205ENST00000483847 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
SMARCC1-205ENST00000483847 ISCA1Q9BUE6 129 aa14.27□□□□□ -0.13
SMARCC1-205ENST00000483847 CHPF2Q9P2E5 772 aa14.27□□□□□ -0.13
SMARCC1-205ENST00000483847 UBE2Q2LH0YL09 131 aa14.26□□□□□ -0.13
SMARCC1-205ENST00000483847 RIPK4P57078 832 aa14.26□□□□□ -0.13
SMARCC1-205ENST00000483847 ZC3H12CQ9C0D7 883 aaKnown RBP14.26□□□□□ -0.13
SMARCC1-205ENST00000483847 HDAC9Q9UKV0 1011 aa14.26□□□□□ -0.13
SMARCC1-205ENST00000483847 PSME4Q14997 1843 aa14.25□□□□□ -0.13
SMARCC1-205ENST00000483847 RPS8P62241 208 aaKnown RBP14.25□□□□□ -0.13
SMARCC1-205ENST00000483847 FKBP1BP68106 108 aa14.25□□□□□ -0.13
SMARCC1-205ENST00000483847 PKN2Q16513 984 aaKnown RBP14.25□□□□□ -0.13
SMARCC1-205ENST00000483847 PRAMEF18Q5VWM3 479 aa14.25□□□□□ -0.13
SMARCC1-205ENST00000483847 RSBN1LQ6PCB5 846 aaPredicted RBP14.25□□□□□ -0.13
SMARCC1-205ENST00000483847 PLBD2Q8NHP8 589 aa14.25□□□□□ -0.13
SMARCC1-205ENST00000483847 SEC31BQ9NQW1 1179 aa14.25□□□□□ -0.13
SMARCC1-205ENST00000483847 ZNF609O15014 1411 aa14.24□□□□□ -0.13
SMARCC1-205ENST00000483847 IRS4O14654 1257 aaPredicted RBP14.24□□□□□ -0.13
SMARCC1-205ENST00000483847 UFL1O94874 794 aa14.24□□□□□ -0.13
SMARCC1-205ENST00000483847 ANKRD13DQ6ZTN6 518 aa14.24□□□□□ -0.13
SMARCC1-205ENST00000483847 GMLQ99445 158 aa14.24□□□□□ -0.13
SMARCC1-205ENST00000483847 BABAM1Q9NWV8 329 aa14.24□□□□□ -0.13
SMARCC1-205ENST00000483847 PODXL2Q9NZ53 605 aa14.24□□□□□ -0.13
SMARCC1-205ENST00000483847 HTTP42858 3142 aa14.24□□□□□ -0.13
SMARCC1-205ENST00000483847 G3V3G9 751 aa14.23□□□□□ -0.13
SMARCC1-205ENST00000483847 GPR25O00155 361 aa14.23□□□□□ -0.13
SMARCC1-205ENST00000483847 DCAF8Q5TAQ9 597 aa14.23□□□□□ -0.13
SMARCC1-205ENST00000483847 PIAS4Q8N2W9 510 aaPredicted RBP14.23□□□□□ -0.13
SMARCC1-205ENST00000483847 AGBL3Q8NEM8 1001 aa14.23□□□□□ -0.13
SMARCC1-205ENST00000483847 R3HDMLQ9H3Y0 253 aa14.23□□□□□ -0.13
SMARCC1-205ENST00000483847 MYOZ2Q9NPC6 264 aa14.23□□□□□ -0.13
SMARCC1-205ENST00000483847 PITPNM2Q9BZ72 1349 aa14.22□□□□□ -0.13
SMARCC1-205ENST00000483847 USP17L8P0C7I0 530 aa14.22□□□□□ -0.13
SMARCC1-205ENST00000483847 TMPOP42166 694 aaKnown RBP14.22□□□□□ -0.13
SMARCC1-205ENST00000483847 TM4SF4P48230 202 aa14.22□□□□□ -0.13
SMARCC1-205ENST00000483847 MKRN3Q13064 507 aaKnown RBP14.22□□□□□ -0.13
SMARCC1-205ENST00000483847 FBXO46Q6PJ61 603 aaPredicted RBP14.22□□□□□ -0.13
SMARCC1-205ENST00000483847 PNNQ9H307 717 aaKnown RBP14.22□□□□□ -0.13
SMARCC1-205ENST00000483847 ANKIB1Q9P2G1 1089 aa14.22□□□□□ -0.13
SMARCC1-205ENST00000483847 WTIPA6NIX2 430 aaPredicted RBP14.21□□□□□ -0.13
SMARCC1-205ENST00000483847 NBPF9Q3BBW0 867 aa14.21□□□□□ -0.13
SMARCC1-205ENST00000483847 HDGFL1Q5TGJ6 251 aa14.21□□□□□ -0.13
SMARCC1-205ENST00000483847 GGA1Q9UJY5 639 aa14.21□□□□□ -0.13
SMARCC1-205ENST00000483847 MKI67P46013 3256 aaKnown RBP14.21□□□□□ -0.13
SMARCC1-205ENST00000483847 ZNF646O15015 1829 aaPredicted RBP14.2□□□□□ -0.14
SMARCC1-205ENST00000483847 CHL1O00533 1208 aa14.2□□□□□ -0.14
SMARCC1-205ENST00000483847 TTLL12Q14166 644 aaPredicted RBP14.2□□□□□ -0.14
SMARCC1-205ENST00000483847 MXD3Q9BW11 206 aa14.2□□□□□ -0.14
SMARCC1-205ENST00000483847 TRIM28Q13263 835 aaKnown RBP14.19□□□□□ -0.14
SMARCC1-205ENST00000483847 NOM1Q5C9Z4 860 aaKnown RBP14.19□□□□□ -0.14
SMARCC1-205ENST00000483847 JARID2Q92833 1246 aaPredicted RBP14.19□□□□□ -0.14
SMARCC1-205ENST00000483847 CCDC85AQ96PX6 553 aaPredicted RBP14.19□□□□□ -0.14
SMARCC1-205ENST00000483847 DBF4Q9UBU7 674 aaPredicted RBP14.19□□□□□ -0.14
SMARCC1-205ENST00000483847 LAS1LQ9Y4W2 734 aaKnown RBP14.19□□□□□ -0.14
SMARCC1-205ENST00000483847 USP17L3A6NCW0 530 aa14.18□□□□□ -0.14
SMARCC1-205ENST00000483847 USP17L4A6NCW7 530 aa14.18□□□□□ -0.14
SMARCC1-205ENST00000483847 FKTNO75072 461 aa14.18□□□□□ -0.14
SMARCC1-205ENST00000483847 LMOD3Q0VAK6 560 aa14.18□□□□□ -0.14
SMARCC1-205ENST00000483847 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
SMARCC1-205ENST00000483847 HABP4Q5JVS0 413 aaKnown RBP14.18□□□□□ -0.14
SMARCC1-205ENST00000483847 USP17L1Q7RTZ2 530 aa14.18□□□□□ -0.14
SMARCC1-205ENST00000483847 PTPN12Q05209 780 aaKnown RBP14.17□□□□□ -0.14
SMARCC1-205ENST00000483847 PRKG1Q13976 671 aa14.17□□□□□ -0.14
SMARCC1-205ENST00000483847 ZBTB38Q8NAP3 1195 aaPredicted RBP14.17□□□□□ -0.14
SMARCC1-205ENST00000483847 GCC1Q96CN9 775 aa14.17□□□□□ -0.14
SMARCC1-205ENST00000483847 CFHR5Q9BXR6 569 aa14.17□□□□□ -0.14
SMARCC1-205ENST00000483847 CENPFP49454 3210 aa14.17□□□□□ -0.14
SMARCC1-205ENST00000483847 XDHP47989 1333 aa14.16□□□□□ -0.14
SMARCC1-205ENST00000483847 POTEFA5A3E0 1075 aa14.16□□□□□ -0.14
SMARCC1-205ENST00000483847 WNT10BO00744 389 aa14.16□□□□□ -0.14
SMARCC1-205ENST00000483847 SASH1O94885 1247 aa14.16□□□□□ -0.14
SMARCC1-205ENST00000483847 SREBF2Q12772 1141 aa14.16□□□□□ -0.14
SMARCC1-205ENST00000483847 DACT2Q5SW24 774 aa14.16□□□□□ -0.14
SMARCC1-205ENST00000483847 PODNQ7Z5L7 613 aa14.16□□□□□ -0.14
SMARCC1-205ENST00000483847 CCDC146Q8IYE0 955 aa14.16□□□□□ -0.14
SMARCC1-205ENST00000483847 HYPKQ9NX55 129 aa14.16□□□□□ -0.14
SMARCC1-205ENST00000483847 FZD1Q9UP38 647 aa14.16□□□□□ -0.14
SMARCC1-205ENST00000483847 TRIM35Q9UPQ4 493 aa14.16□□□□□ -0.14
SMARCC1-205ENST00000483847 CCDC152Q4G0S7 254 aa14.15□□□□□ -0.14
SMARCC1-205ENST00000483847 RIC3Q7Z5B4 369 aa14.15□□□□□ -0.14
SMARCC1-205ENST00000483847 PHAXQ9H814 394 aaKnown RBP14.15□□□□□ -0.14
SMARCC1-205ENST00000483847 SPEF2Q9C093 1822 aa14.15□□□□□ -0.14
SMARCC1-205ENST00000483847 PDE8AO60658 829 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms