RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 IARSP41252 1262 aaKnown RBP8.66□□□□□ -1.02
BRCA1-215ENST00000478531 GPSM2P81274 684 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 CCDC57Q2TAC2 916 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 ZNF594Q96JF6 807 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-215ENST00000478531 MPHOSPH8Q99549 860 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 FOXD4L1Q9NU39 408 aa8.66□□□□□ -1.02
BRCA1-215ENST00000478531 LRRFIP2Q9Y608 721 aaKnown RBP8.66□□□□□ -1.02
BRCA1-215ENST00000478531 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
BRCA1-215ENST00000478531 PPIP5K2O43314 1243 aa8.65□□□□□ -1.02
BRCA1-215ENST00000478531 AOC3Q16853 763 aa8.65□□□□□ -1.02
BRCA1-215ENST00000478531 GRIPAP1Q4V328 841 aa8.65□□□□□ -1.02
BRCA1-215ENST00000478531 ANKRD44Q8N8A2 993 aa8.65□□□□□ -1.02
BRCA1-215ENST00000478531 ZNF784Q8NCA9 323 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-215ENST00000478531 PANK1Q8TE04 598 aa8.65□□□□□ -1.02
BRCA1-215ENST00000478531 GPR101Q96P66 508 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-215ENST00000478531 UFL1O94874 794 aa8.64□□□□□ -1.03
BRCA1-215ENST00000478531 LARGE2Q8N3Y3 721 aa8.64□□□□□ -1.03
BRCA1-215ENST00000478531 SUPT20HQ8NEM7 779 aa8.64□□□□□ -1.03
BRCA1-215ENST00000478531 BSDC1Q9NW68 430 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-215ENST00000478531 GNAI3P08754 354 aa8.64□□□□□ -1.03
BRCA1-215ENST00000478531 JDP2Q8WYK2 163 aa8.64□□□□□ -1.03
BRCA1-215ENST00000478531 CNNM1Q9NRU3 951 aa8.64□□□□□ -1.03
BRCA1-215ENST00000478531 POLLQ9UGP5 575 aa8.64□□□□□ -1.03
BRCA1-215ENST00000478531 GGA1Q9UJY5 639 aa8.64□□□□□ -1.03
BRCA1-215ENST00000478531 XDHP47989 1333 aa8.63□□□□□ -1.03
BRCA1-215ENST00000478531 RIMBP2O15034 1052 aa8.63□□□□□ -1.03
BRCA1-215ENST00000478531 RABL6Q3YEC7 729 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-215ENST00000478531 LDHAL6AQ6ZMR3 332 aa8.63□□□□□ -1.03
BRCA1-215ENST00000478531 NIM1KQ8IY84 436 aa8.63□□□□□ -1.03
BRCA1-215ENST00000478531 KLHDC4Q8TBB5 520 aa8.63□□□□□ -1.03
BRCA1-215ENST00000478531 TBC1D16Q8TBP0 767 aa8.63□□□□□ -1.03
BRCA1-215ENST00000478531 RTFDC1Q9BY42 306 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-215ENST00000478531 GPBP1L1Q9HC44 474 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-215ENST00000478531 MINPP1Q9UNW1 487 aa8.63□□□□□ -1.03
BRCA1-215ENST00000478531 ZNF541Q9H0D2 1346 aa8.63□□□□□ -1.03
BRCA1-215ENST00000478531 ZC3H4Q9UPT8 1303 aaKnown RBP8.63□□□□□ -1.03
BRCA1-215ENST00000478531 CHRNDQ07001 517 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 WASHC4Q2M389 1173 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-215ENST00000478531 HELBQ8NG08 1087 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-215ENST00000478531 C1orf115Q9H7X2 142 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 HDAC5Q9UQL6 1122 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 SCN9AQ15858 1988 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 WTIPA6NIX2 430 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-215ENST00000478531 TAF5LO75529 589 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 GNAI2P04899 355 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 MS4A1P11836 297 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 KCNJ4P48050 445 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 KIAA2012Q0VF49 1180 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 EYA3Q99504 573 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 PUS3Q9BZE2 481 aaKnown RBP8.62□□□□□ -1.03
BRCA1-215ENST00000478531 SIL1Q9H173 461 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 DBNDD1Q9H9R9 158 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 PODXL2Q9NZ53 605 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 COG6Q9Y2V7 657 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 KDM2BQ8NHM5 1336 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 CEP350Q5VT06 3117 aa8.62□□□□□ -1.03
BRCA1-215ENST00000478531 G3V3G9 751 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 DCAF8Q5TAQ9 597 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 C20orf194Q5TEA3 1177 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 ANKRD2Q9GZV1 360 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 PSME4Q14997 1843 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 WDR90Q96KV7 1748 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 GLTPD2A6NH11 291 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 SNAP23O00161 211 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 SRGAP3O43295 1099 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 DDNO94850 711 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-215ENST00000478531 ATP2B4P23634 1241 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 EIF6P56537 245 aaKnown RBP8.61□□□□□ -1.03
BRCA1-215ENST00000478531 MVPQ14764 893 aaKnown RBP8.61□□□□□ -1.03
BRCA1-215ENST00000478531 DOK7Q18PE1 504 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 LRRC24Q50LG9 513 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 DPY19L2Q6NUT2 758 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 ERICH6Q7L0X2 663 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 ZC3H12CQ9C0D7 883 aaKnown RBP8.61□□□□□ -1.03
BRCA1-215ENST00000478531 NMRK2Q9NPI5 230 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 GJA3Q9Y6H8 435 aa8.61□□□□□ -1.03
BRCA1-215ENST00000478531 MYH13Q9UKX3 1938 aa8.6□□□□□ -1.03
BRCA1-215ENST00000478531 FZD9O00144 591 aa8.6□□□□□ -1.03
BRCA1-215ENST00000478531 ECE2O60344 883 aa8.6□□□□□ -1.03
BRCA1-215ENST00000478531 KLRK1P26718 216 aa8.6□□□□□ -1.03
BRCA1-215ENST00000478531 METTL24Q5JXM2 366 aa8.6□□□□□ -1.03
BRCA1-215ENST00000478531 VPS33BQ9H267 617 aa8.6□□□□□ -1.03
BRCA1-215ENST00000478531 PA2G4Q9UQ80 394 aaKnown RBP8.6□□□□□ -1.03
BRCA1-215ENST00000478531 ZNF804BA4D1E1 1349 aa8.6□□□□□ -1.03
BRCA1-215ENST00000478531 SCN4AP35499 1836 aa8.6□□□□□ -1.03
BRCA1-215ENST00000478531 MED23Q9ULK4 1368 aa8.6□□□□□ -1.03
BRCA1-215ENST00000478531 ZBTB7BO15156 539 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-215ENST00000478531 RAD17O75943 681 aa8.59□□□□□ -1.03
BRCA1-215ENST00000478531 RFX5P48382 616 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-215ENST00000478531 RRP1P56182 461 aaKnown RBP8.59□□□□□ -1.03
BRCA1-215ENST00000478531 PTPN12Q05209 780 aaKnown RBP8.59□□□□□ -1.03
BRCA1-215ENST00000478531 ZNRF3Q9ULT6 936 aa8.59□□□□□ -1.03
BRCA1-215ENST00000478531 DDX19BQ9UMR2 479 aa8.59□□□□□ -1.03
BRCA1-215ENST00000478531 MROH5Q6ZUA9 1318 aa8.59□□□□□ -1.03
BRCA1-215ENST00000478531 YDJCA8MPS7 323 aa8.59□□□□□ -1.03
BRCA1-215ENST00000478531 FBXW7Q969H0 707 aa8.59□□□□□ -1.03
BRCA1-215ENST00000478531 RRAGCQ9HB90 399 aa8.59□□□□□ -1.03
BRCA1-215ENST00000478531 LEMD3Q9Y2U8 911 aa8.59□□□□□ -1.03
BRCA1-215ENST00000478531 RIPOR2Q9Y4F9 1068 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms