RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 SUPT20HQ8NEM7 779 aa16.5■□□□□ 0.23
HLA-DPA1-246ENST00000476642 PANK1Q8TE04 598 aa16.5■□□□□ 0.23
HLA-DPA1-246ENST00000476642 KAZALD1Q96I82 304 aa16.5■□□□□ 0.23
HLA-DPA1-246ENST00000476642 TAOK3Q9H2K8 898 aa16.5■□□□□ 0.23
HLA-DPA1-246ENST00000476642 BSDC1Q9NW68 430 aaPredicted RBP16.5■□□□□ 0.23
HLA-DPA1-246ENST00000476642 SBF1O95248 1867 aa16.5■□□□□ 0.23
HLA-DPA1-246ENST00000476642 ZBTB7BO15156 539 aaPredicted RBP16.49■□□□□ 0.23
HLA-DPA1-246ENST00000476642 PRELPP51888 382 aa16.49■□□□□ 0.23
HLA-DPA1-246ENST00000476642 EPHA10Q5JZY3 1008 aa16.49■□□□□ 0.23
HLA-DPA1-246ENST00000476642 PSMD1Q99460 953 aa16.49■□□□□ 0.23
HLA-DPA1-246ENST00000476642 LRRFIP2Q9Y608 721 aaKnown RBP16.49■□□□□ 0.23
HLA-DPA1-246ENST00000476642 SPEF2Q9C093 1822 aa16.49■□□□□ 0.23
HLA-DPA1-246ENST00000476642 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
HLA-DPA1-246ENST00000476642 MPNDQ8N594 471 aa16.48■□□□□ 0.23
HLA-DPA1-246ENST00000476642 VPS33BQ9H267 617 aa16.48■□□□□ 0.23
HLA-DPA1-246ENST00000476642 COG6Q9Y2V7 657 aa16.48■□□□□ 0.23
HLA-DPA1-246ENST00000476642 WDR90Q96KV7 1748 aa16.48■□□□□ 0.23
HLA-DPA1-246ENST00000476642 DPP8Q6V1X1 898 aaPredicted RBP16.47■□□□□ 0.23
HLA-DPA1-246ENST00000476642 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
HLA-DPA1-246ENST00000476642 ANKRD2Q9GZV1 360 aa16.47■□□□□ 0.23
HLA-DPA1-246ENST00000476642 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
HLA-DPA1-246ENST00000476642 MTX1Q13505 466 aa16.46■□□□□ 0.23
HLA-DPA1-246ENST00000476642 LDHAL6AQ6ZMR3 332 aa16.46■□□□□ 0.23
HLA-DPA1-246ENST00000476642 CNNM1Q9NRU3 951 aa16.46■□□□□ 0.23
HLA-DPA1-246ENST00000476642 ANKIB1Q9P2G1 1089 aa16.46■□□□□ 0.23
HLA-DPA1-246ENST00000476642 NSFL1CQ9UNZ2 370 aaKnown RBP16.46■□□□□ 0.23
HLA-DPA1-246ENST00000476642 CCDC88AQ3V6T2 1871 aa16.46■□□□□ 0.22
HLA-DPA1-246ENST00000476642 XDHP47989 1333 aa16.45■□□□□ 0.22
HLA-DPA1-246ENST00000476642 DICER1Q9UPY3 1922 aaKnown RBP16.45■□□□□ 0.22
HLA-DPA1-246ENST00000476642 EYA3Q99504 573 aa16.45■□□□□ 0.22
HLA-DPA1-246ENST00000476642 PODXL2Q9NZ53 605 aa16.45■□□□□ 0.22
HLA-DPA1-246ENST00000476642 RTFDC1Q9BY42 306 aaPredicted RBP16.44■□□□□ 0.22
HLA-DPA1-246ENST00000476642 MINPP1Q9UNW1 487 aa16.44■□□□□ 0.22
HLA-DPA1-246ENST00000476642 SNED1Q8TER0 1413 aa16.44■□□□□ 0.22
HLA-DPA1-246ENST00000476642 SRGAP3O43295 1099 aa16.43■□□□□ 0.22
HLA-DPA1-246ENST00000476642 ATP2B4P23634 1241 aa16.43■□□□□ 0.22
HLA-DPA1-246ENST00000476642 AAMPQ13685 434 aa16.43■□□□□ 0.22
HLA-DPA1-246ENST00000476642 JMYQ8N9B5 988 aa16.43■□□□□ 0.22
HLA-DPA1-246ENST00000476642 GGA1Q9UJY5 639 aa16.43■□□□□ 0.22
HLA-DPA1-246ENST00000476642 LEMD3Q9Y2U8 911 aa16.43■□□□□ 0.22
HLA-DPA1-246ENST00000476642 MROH5Q6ZUA9 1318 aa16.43■□□□□ 0.22
HLA-DPA1-246ENST00000476642 TIAM2Q8IVF5 1701 aa16.42■□□□□ 0.22
HLA-DPA1-246ENST00000476642 C6orf229H3BNL8 230 aa16.42■□□□□ 0.22
HLA-DPA1-246ENST00000476642 IARSP41252 1262 aaKnown RBP16.42■□□□□ 0.22
HLA-DPA1-246ENST00000476642 C20orf194Q5TEA3 1177 aa16.42■□□□□ 0.22
HLA-DPA1-246ENST00000476642 OLFM4Q6UX06 510 aa16.42■□□□□ 0.22
HLA-DPA1-246ENST00000476642 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
HLA-DPA1-246ENST00000476642 ZBTB40Q9NUA8 1239 aa16.42■□□□□ 0.22
HLA-DPA1-246ENST00000476642 LTBP1Q14766 1721 aa16.42■□□□□ 0.22
HLA-DPA1-246ENST00000476642 COL4A1P02462 1669 aa16.41■□□□□ 0.22
HLA-DPA1-246ENST00000476642 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
HLA-DPA1-246ENST00000476642 KCNJ4P48050 445 aa16.41■□□□□ 0.22
HLA-DPA1-246ENST00000476642 GPSM2P81274 684 aa16.41■□□□□ 0.22
HLA-DPA1-246ENST00000476642 ATP8B2P98198 1209 aa16.41■□□□□ 0.22
HLA-DPA1-246ENST00000476642 RPAP2Q8IXW5 612 aaPredicted RBP16.41■□□□□ 0.22
HLA-DPA1-246ENST00000476642 ZNF594Q96JF6 807 aaPredicted RBP16.41■□□□□ 0.22
HLA-DPA1-246ENST00000476642 COPRSQ9NQ92 184 aa16.41■□□□□ 0.22
HLA-DPA1-246ENST00000476642 SUPT16HQ9Y5B9 1047 aaKnown RBP16.41■□□□□ 0.22
HLA-DPA1-246ENST00000476642 IQCA1LA6NCM1 817 aa16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 POTECB2RU33 542 aa16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 EYA2O00167 538 aa16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 HMMRO75330 724 aa16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 CIAO1O76071 339 aa16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 DDNO94850 711 aaPredicted RBP16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 UFL1O94874 794 aa16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 PTPN12Q05209 780 aaKnown RBP16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 CHRNDQ07001 517 aa16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 WASHC4Q2M389 1173 aa16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 CHADLQ6NUI6 762 aa16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 LARGE2Q8N3Y3 721 aa16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 ZC3H12CQ9C0D7 883 aaKnown RBP16.4■□□□□ 0.22
HLA-DPA1-246ENST00000476642 A0A1B0GUL6 1792 aa16.39■□□□□ 0.21
HLA-DPA1-246ENST00000476642 PPIP5K2O43314 1243 aa16.39■□□□□ 0.21
HLA-DPA1-246ENST00000476642 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
HLA-DPA1-246ENST00000476642 RFX5P48382 616 aaPredicted RBP16.39■□□□□ 0.21
HLA-DPA1-246ENST00000476642 KIAA2012Q0VF49 1180 aa16.39■□□□□ 0.21
HLA-DPA1-246ENST00000476642 TBC1D16Q8TBP0 767 aa16.39■□□□□ 0.21
HLA-DPA1-246ENST00000476642 ZNF277Q9NRM2 450 aaPredicted RBP16.39■□□□□ 0.21
HLA-DPA1-246ENST00000476642 RIPOR2Q9Y4F9 1068 aa16.39■□□□□ 0.21
HLA-DPA1-246ENST00000476642 G3V3G9 751 aa16.38■□□□□ 0.21
HLA-DPA1-246ENST00000476642 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
HLA-DPA1-246ENST00000476642 DCAF8Q5TAQ9 597 aa16.38■□□□□ 0.21
HLA-DPA1-246ENST00000476642 CEP85Q6P2H3 762 aa16.38■□□□□ 0.21
HLA-DPA1-246ENST00000476642 NIM1KQ8IY84 436 aa16.38■□□□□ 0.21
HLA-DPA1-246ENST00000476642 SSH3Q8TE77 659 aa16.38■□□□□ 0.21
HLA-DPA1-246ENST00000476642 C1orf115Q9H7X2 142 aa16.38■□□□□ 0.21
HLA-DPA1-246ENST00000476642 ZNF804BA4D1E1 1349 aa16.38■□□□□ 0.21
HLA-DPA1-246ENST00000476642 DUOX1Q9NRD9 1551 aa16.38■□□□□ 0.21
HLA-DPA1-246ENST00000476642 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.21
HLA-DPA1-246ENST00000476642 UBE4AQ14139 1066 aa16.37■□□□□ 0.21
HLA-DPA1-246ENST00000476642 POLA2Q14181 598 aa16.37■□□□□ 0.21
HLA-DPA1-246ENST00000476642 POLLQ9UGP5 575 aa16.37■□□□□ 0.21
HLA-DPA1-246ENST00000476642 MED23Q9ULK4 1368 aa16.37■□□□□ 0.21
HLA-DPA1-246ENST00000476642 PNMA6EA0A0J9YXQ4 647 aa16.36■□□□□ 0.21
HLA-DPA1-246ENST00000476642 PDE8BO95263 885 aa16.36■□□□□ 0.21
HLA-DPA1-246ENST00000476642 AOC3Q16853 763 aa16.36■□□□□ 0.21
HLA-DPA1-246ENST00000476642 HSP90AB4PQ58FF6 505 aa16.36■□□□□ 0.21
HLA-DPA1-246ENST00000476642 KLHDC4Q8TBB5 520 aa16.36■□□□□ 0.21
HLA-DPA1-246ENST00000476642 PUS3Q9BZE2 481 aaKnown RBP16.36■□□□□ 0.21
HLA-DPA1-246ENST00000476642 CEP126Q9P2H0 1117 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms