RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 HECW1Q76N89 1606 aa6.27□□□□□ -1.41
TMEM39A-206ENST00000473684 INO80Q9ULG1 1556 aaPredicted RBP6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 CAPN2P17655 700 aa6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 PSMA6P60900 246 aaKnown RBP6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 ZNF697Q5TEC3 545 aa6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 TMED8Q6PL24 325 aaPredicted RBP6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 GAS2L3Q86XJ1 694 aa6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 PDCL2Q8N4E4 241 aa6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 KLF16Q9BXK1 252 aaPredicted RBP6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 CDC42BPBQ9Y5S2 1711 aa6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 HSPA5P11021 654 aaKnown RBP6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 CLN3Q13286 438 aa6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 TLR1Q15399 786 aa6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 COX20Q5RI15 118 aa6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 GIPC2Q8TF65 315 aa6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 KIAA1522Q9P206 1035 aaPredicted RBP6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 NLRP1Q9C000 1473 aa6.26□□□□□ -1.41
TMEM39A-206ENST00000473684 MPSTP25325 297 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 CBLBQ13191 982 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 FBXO33Q7Z6M2 555 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 SNIP1Q8TAD8 396 aaKnown RBP6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 NCAPGQ9BPX3 1015 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 QTRT2Q9H974 415 aaKnown RBP6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 UPF2Q9HAU5 1272 aaKnown RBP6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 CCDC39Q9UFE4 941 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 WASF2Q9Y6W5 498 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 TNFRSF10BO14763 440 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 ZSCAN29Q8IWY8 852 aaPredicted RBP6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 RGL4Q8IZJ4 473 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 MRRFQ96E11 262 aaKnown RBP6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 FHDC1Q9C0D6 1143 aaPredicted RBP6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 BRMS1Q9HCU9 246 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 ZMYM3Q14202 1370 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 SATB1Q01826 763 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 ZNF295-AS1Q8N0V1 137 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 FBXO41Q8TF61 875 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 GBP4Q96PP9 640 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 PANK3Q9H999 370 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 CEP83Q9Y592 693 aa6.25□□□□□ -1.41
TMEM39A-206ENST00000473684 SPATA31D1Q6ZQQ2 1576 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 DIP2CQ9Y2E4 1556 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 SLFN14P0C7P3 912 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 PTGIRP43119 386 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 TNNT3P45378 269 aaPredicted RBP6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 HIRAP54198 1017 aaPredicted RBP6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 FOXC1Q12948 553 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 ITPKCQ96DU7 683 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 MYO19Q96H55 970 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 CRBNQ96SW2 442 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 LRPPRCP42704 1394 aaKnown RBP6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 LOC102724159A0A0B4J2E5 919 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 CENPCQ03188 943 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 COL19A1Q14993 1142 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 PWP2Q15269 919 aaKnown RBP6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 RBCK1Q9BYM8 510 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 IGSF5Q9NSI5 407 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 SMC4Q9NTJ3 1288 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 STIM2Q9P246 746 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 LRFN2Q9ULH4 789 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 MLH3Q9UHC1 1453 aa6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 RNF17Q9BXT8 1623 aaKnown RBP6.24□□□□□ -1.41
TMEM39A-206ENST00000473684 ROCK2O75116 1388 aaKnown RBP6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 SETQ01105 290 aaPredicted RBP6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 TEAD4Q15561 434 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 FAM43BQ6ZT52 329 aaPredicted RBP6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 NBPF15Q8N660 670 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 PNISRQ8TF01 805 aaKnown RBP6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 ZDHHC1Q8WTX9 485 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 FEZ2Q9UHY8 353 aaPredicted RBP6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 KIAA1107Q9UPP5 1409 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 MAST1Q9Y2H9 1570 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 CHMP3Q9Y3E7 222 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 CFAP65Q6ZU64 1925 aaKnown RBP6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 CDC42BPAQ5VT25 1732 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 MAPK8IP3Q9UPT6 1336 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 EML1O00423 815 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 ZIC2O95409 532 aaPredicted RBP6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 CCDC172P0C7W6 258 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 KIAA2012Q0VF49 1180 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 MYO3AQ8NEV4 1616 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 CARMIL1Q5VZK9 1371 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 SERTM1A2A2V5 107 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 EIF1AXP47813 144 aaKnown RBP6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 GTF2A1P52655 376 aaPredicted RBP6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 SKAP1Q86WV1 359 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 ANKRD7Q92527 254 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 AGBL1Q96MI9 1066 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 RAI14Q9P0K7 980 aa6.23□□□□□ -1.41
TMEM39A-206ENST00000473684 SUPT6HQ7KZ85 1726 aaKnown RBP6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 RAD50Q92878 1312 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 J3QL48 77 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 FZD6O60353 706 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 NOS2P35228 1153 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 MMRN1Q13201 1228 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 SH3PXD2AQ5TCZ1 1133 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 TMC7Q7Z402 723 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 CHMP4CQ96CF2 233 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 TBC1D32Q96NH3 1257 aa6.22□□□□□ -1.41
TMEM39A-206ENST00000473684 ZFAND3Q9H8U3 227 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms