RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 GCKRQ14397 625 aa11.55□□□□□ -0.56
FN1-216ENST00000469569 CCDC152Q4G0S7 254 aa11.55□□□□□ -0.56
FN1-216ENST00000469569 SSH1Q8WYL5 1049 aa11.55□□□□□ -0.56
FN1-216ENST00000469569 ARHGAP45Q92619 1136 aa11.55□□□□□ -0.56
FN1-216ENST00000469569 KIF16BQ96L93 1317 aa11.55□□□□□ -0.56
FN1-216ENST00000469569 BRCA1P38398 1863 aaKnown RBP11.55□□□□□ -0.56
FN1-216ENST00000469569 DLEC1Q9Y238 1755 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 ARFGEF2Q9Y6D5 1785 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 H7C1W4 665 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 C21orf2O43822 256 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 IGKV5-2P06315 115 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 PDE4AP27815 886 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 C7orf43Q8WVR3 580 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 API5Q9BZZ5 524 aaKnown RBP11.54□□□□□ -0.56
FN1-216ENST00000469569 SRCIN1Q9C0H9 1055 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 CRISPLD2Q9H0B8 497 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 VPS33BQ9H267 617 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 WWC3Q9ULE0 1092 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 ANKRD31Q8N7Z5 1873 aa11.54□□□□□ -0.56
FN1-216ENST00000469569 RARSP54136 660 aaKnown RBP11.53□□□□□ -0.56
FN1-216ENST00000469569 GRAPQ13588 217 aa11.53□□□□□ -0.56
FN1-216ENST00000469569 BEND3Q5T5X7 828 aa11.53□□□□□ -0.56
FN1-216ENST00000469569 SUPT20HQ8NEM7 779 aa11.53□□□□□ -0.56
FN1-216ENST00000469569 GRAPLQ8TC17 118 aaPredicted RBP11.53□□□□□ -0.56
FN1-216ENST00000469569 LARP6Q9BRS8 491 aaKnown RBP11.53□□□□□ -0.56
FN1-216ENST00000469569 PLA2G12BQ9BX93 195 aa11.53□□□□□ -0.56
FN1-216ENST00000469569 TAOK3Q9H2K8 898 aa11.53□□□□□ -0.56
FN1-216ENST00000469569 C9orf78Q9NZ63 289 aaPredicted RBP11.53□□□□□ -0.56
FN1-216ENST00000469569 PPEF1O14829 653 aaPredicted RBP11.52□□□□□ -0.57
FN1-216ENST00000469569 CCT4P50991 539 aaKnown RBP11.52□□□□□ -0.57
FN1-216ENST00000469569 CWF19L2Q2TBE0 894 aaKnown RBP11.52□□□□□ -0.57
FN1-216ENST00000469569 SLC4A10Q6U841 1118 aa11.52□□□□□ -0.57
FN1-216ENST00000469569 SP8Q8IXZ3 490 aa11.52□□□□□ -0.57
FN1-216ENST00000469569 TMC2Q8TDI7 906 aa11.52□□□□□ -0.57
FN1-216ENST00000469569 CDC5LQ99459 802 aaKnown RBP11.52□□□□□ -0.57
FN1-216ENST00000469569 PSMD1Q99460 953 aa11.52□□□□□ -0.57
FN1-216ENST00000469569 ATP6V0A2Q9Y487 856 aa11.52□□□□□ -0.57
FN1-216ENST00000469569 GRM8O00222 908 aa11.51□□□□□ -0.57
FN1-216ENST00000469569 RPS8P62241 208 aaKnown RBP11.51□□□□□ -0.57
FN1-216ENST00000469569 FKBP4Q02790 459 aaKnown RBP eCLIP11.51□□□□□ -0.57
FN1-216ENST00000469569 RTL5Q5HYW3 569 aaPredicted RBP11.51□□□□□ -0.57
FN1-216ENST00000469569 C9orf131Q5VYM1 1079 aa11.51□□□□□ -0.57
FN1-216ENST00000469569 TMEM92Q6UXU6 159 aa11.51□□□□□ -0.57
FN1-216ENST00000469569 UBE3BQ7Z3V4 1068 aa11.51□□□□□ -0.57
FN1-216ENST00000469569 SYNE4Q8N205 404 aa11.51□□□□□ -0.57
FN1-216ENST00000469569 WDR70Q9NW82 654 aa11.51□□□□□ -0.57
FN1-216ENST00000469569 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
FN1-216ENST00000469569 ABCC4O15439 1325 aa11.51□□□□□ -0.57
FN1-216ENST00000469569 RTL9Q8NET4 1388 aa11.51□□□□□ -0.57
FN1-216ENST00000469569 F6X3S4 739 aa11.5□□□□□ -0.57
FN1-216ENST00000469569 CTSWP56202 376 aa11.5□□□□□ -0.57
FN1-216ENST00000469569 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
FN1-216ENST00000469569 RNF181Q9P0P0 153 aa11.5□□□□□ -0.57
FN1-216ENST00000469569 C2orf72A6NCS6 295 aa11.49□□□□□ -0.57
FN1-216ENST00000469569 NFKBIEO00221 500 aa11.49□□□□□ -0.57
FN1-216ENST00000469569 MS4A1P11836 297 aa11.49□□□□□ -0.57
FN1-216ENST00000469569 ANKRD18AQ8IVF6 992 aa11.49□□□□□ -0.57
FN1-216ENST00000469569 TTLL11Q8NHH1 800 aa11.49□□□□□ -0.57
FN1-216ENST00000469569 NOB1Q9ULX3 412 aaKnown RBP11.49□□□□□ -0.57
FN1-216ENST00000469569 KDM2BQ8NHM5 1336 aa11.49□□□□□ -0.57
FN1-216ENST00000469569 COL11A2P13942 1736 aaPredicted RBP11.49□□□□□ -0.57
FN1-216ENST00000469569 CSF1RP07333 972 aa11.48□□□□□ -0.57
FN1-216ENST00000469569 CASP7P55210 303 aa11.48□□□□□ -0.57
FN1-216ENST00000469569 DPP8Q6V1X1 898 aaPredicted RBP11.48□□□□□ -0.57
FN1-216ENST00000469569 MPNDQ8N594 471 aa11.48□□□□□ -0.57
FN1-216ENST00000469569 JDP2Q8WYK2 163 aa11.48□□□□□ -0.57
FN1-216ENST00000469569 DDX27Q96GQ7 796 aaKnown RBP11.48□□□□□ -0.57
FN1-216ENST00000469569 BCL2L13Q9BXK5 485 aa11.48□□□□□ -0.57
FN1-216ENST00000469569 RTFDC1Q9BY42 306 aaPredicted RBP11.48□□□□□ -0.57
FN1-216ENST00000469569 UTYO14607 1347 aa11.48□□□□□ -0.57
FN1-216ENST00000469569 SLX4Q8IY92 1834 aa11.48□□□□□ -0.57
FN1-216ENST00000469569 IGHMBP2P38935 993 aaKnown RBP11.47□□□□□ -0.57
FN1-216ENST00000469569 ATF7IPQ6VMQ6 1270 aa11.47□□□□□ -0.57
FN1-216ENST00000469569 ZNF784Q8NCA9 323 aaPredicted RBP11.47□□□□□ -0.57
FN1-216ENST00000469569 GPBP1L1Q9HC44 474 aaPredicted RBP11.47□□□□□ -0.57
FN1-216ENST00000469569 BSDC1Q9NW68 430 aaPredicted RBP11.47□□□□□ -0.57
FN1-216ENST00000469569 TNRC6CQ9HCJ0 1690 aaKnown RBP11.46□□□□□ -0.57
FN1-216ENST00000469569 ANKRD18BA2A2Z9 1011 aa11.46□□□□□ -0.57
FN1-216ENST00000469569 KIF3CO14782 793 aa11.46□□□□□ -0.57
FN1-216ENST00000469569 IARSP41252 1262 aaKnown RBP11.46□□□□□ -0.57
FN1-216ENST00000469569 RASSF7Q02833 373 aa11.46□□□□□ -0.57
FN1-216ENST00000469569 IFIT5Q13325 482 aaKnown RBP11.46□□□□□ -0.57
FN1-216ENST00000469569 MFSD10Q14728 455 aa11.46□□□□□ -0.57
FN1-216ENST00000469569 CCDC57Q2TAC2 916 aa11.46□□□□□ -0.57
FN1-216ENST00000469569 ZKSCAN2Q63HK3 967 aa11.46□□□□□ -0.57
FN1-216ENST00000469569 MAMSTRQ6ZN01 415 aa11.46□□□□□ -0.57
FN1-216ENST00000469569 EYA3Q99504 573 aa11.46□□□□□ -0.57
FN1-216ENST00000469569 MPHOSPH8Q99549 860 aa11.46□□□□□ -0.57
FN1-216ENST00000469569 SCUBE2Q9NQ36 999 aa11.46□□□□□ -0.57
FN1-216ENST00000469569 PODXL2Q9NZ53 605 aa11.46□□□□□ -0.57
FN1-216ENST00000469569 LAMB2P55268 1798 aa11.46□□□□□ -0.58
FN1-216ENST00000469569 FER1L6Q2WGJ9 1857 aa11.45□□□□□ -0.58
FN1-216ENST00000469569 GNAI3P08754 354 aa11.45□□□□□ -0.58
FN1-216ENST00000469569 INTS3Q68E01 1043 aaKnown RBP11.45□□□□□ -0.58
FN1-216ENST00000469569 JARID2Q92833 1246 aaPredicted RBP11.45□□□□□ -0.58
FN1-216ENST00000469569 CELF1Q92879 486 aaKnown RBP11.45□□□□□ -0.58
FN1-216ENST00000469569 ANKRD2Q9GZV1 360 aa11.45□□□□□ -0.58
FN1-216ENST00000469569 DDX60Q8IY21 1712 aaKnown RBP11.44□□□□□ -0.58
FN1-216ENST00000469569 XDHP47989 1333 aa11.44□□□□□ -0.58
FN1-216ENST00000469569 GLTPD2A6NH11 291 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms