RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 C9orf131Q5VYM1 1079 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 DDX46Q7L014 1031 aaKnown RBP12.1□□□□□ -0.47
PTPRD-207ENST00000463477 RTKN2Q8IZC4 609 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 PDE8AO60658 829 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 PRELPP51888 382 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 GCKRQ14397 625 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 BEND3Q5T5X7 828 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 CASC1Q6TDU7 716 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 SLC4A10Q6U841 1118 aa12.1□□□□□ -0.47
PTPRD-207ENST00000463477 CDHR2Q9BYE9 1310 aa12.09□□□□□ -0.47
PTPRD-207ENST00000463477 TNRC6CQ9HCJ0 1690 aaKnown RBP12.09□□□□□ -0.47
PTPRD-207ENST00000463477 RASSF7Q02833 373 aa12.09□□□□□ -0.47
PTPRD-207ENST00000463477 RABEP1Q15276 862 aa12.09□□□□□ -0.47
PTPRD-207ENST00000463477 TAOK3Q9H2K8 898 aa12.09□□□□□ -0.47
PTPRD-207ENST00000463477 RNF181Q9P0P0 153 aa12.09□□□□□ -0.47
PTPRD-207ENST00000463477 AOX1Q06278 1338 aa12.09□□□□□ -0.47
PTPRD-207ENST00000463477 SDSP20132 328 aa12.08□□□□□ -0.48
PTPRD-207ENST00000463477 FKBP4Q02790 459 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTPRD-207ENST00000463477 GRAPQ13588 217 aa12.08□□□□□ -0.48
PTPRD-207ENST00000463477 OLFM4Q6UX06 510 aa12.08□□□□□ -0.48
PTPRD-207ENST00000463477 TMC4Q7Z404 712 aa12.08□□□□□ -0.48
PTPRD-207ENST00000463477 SP8Q8IXZ3 490 aa12.08□□□□□ -0.48
PTPRD-207ENST00000463477 C16orf71Q8IYS4 520 aaPredicted RBP12.08□□□□□ -0.48
PTPRD-207ENST00000463477 GRAPLQ8TC17 118 aaPredicted RBP12.08□□□□□ -0.48
PTPRD-207ENST00000463477 JARID2Q92833 1246 aaPredicted RBP12.08□□□□□ -0.48
PTPRD-207ENST00000463477 SRCIN1Q9C0H9 1055 aa12.08□□□□□ -0.48
PTPRD-207ENST00000463477 ATP6V0A2Q9Y487 856 aa12.08□□□□□ -0.48
PTPRD-207ENST00000463477 K7ELQ4 463 aaPredicted RBP12.07□□□□□ -0.48
PTPRD-207ENST00000463477 PPEF1O14829 653 aaPredicted RBP12.07□□□□□ -0.48
PTPRD-207ENST00000463477 ALDH1L1O75891 902 aa12.07□□□□□ -0.48
PTPRD-207ENST00000463477 MCM4P33991 863 aa12.07□□□□□ -0.48
PTPRD-207ENST00000463477 PDE1AP54750 535 aa12.07□□□□□ -0.48
PTPRD-207ENST00000463477 PSMD1Q99460 953 aa12.07□□□□□ -0.48
PTPRD-207ENST00000463477 PLA2G12BQ9BX93 195 aa12.07□□□□□ -0.48
PTPRD-207ENST00000463477 USP26Q9BXU7 913 aa12.07□□□□□ -0.48
PTPRD-207ENST00000463477 USP44Q9H0E7 712 aa12.07□□□□□ -0.48
PTPRD-207ENST00000463477 TMX4Q9H1E5 349 aaPredicted RBP12.07□□□□□ -0.48
PTPRD-207ENST00000463477 STAP2Q9UGK3 403 aa12.07□□□□□ -0.48
PTPRD-207ENST00000463477 ZC3H4Q9UPT8 1303 aaKnown RBP12.07□□□□□ -0.48
PTPRD-207ENST00000463477 REC8O95072 547 aa12.06□□□□□ -0.48
PTPRD-207ENST00000463477 CASP7P55210 303 aa12.06□□□□□ -0.48
PTPRD-207ENST00000463477 CCDC152Q4G0S7 254 aa12.06□□□□□ -0.48
PTPRD-207ENST00000463477 UBE3BQ7Z3V4 1068 aa12.06□□□□□ -0.48
PTPRD-207ENST00000463477 IL27Q8NEV9 243 aa12.06□□□□□ -0.48
PTPRD-207ENST00000463477 OTUD7AQ8TE49 926 aaPredicted RBP12.06□□□□□ -0.48
PTPRD-207ENST00000463477 SSH3Q8TE77 659 aa12.06□□□□□ -0.48
PTPRD-207ENST00000463477 LRRCC1Q9C099 1032 aa12.06□□□□□ -0.48
PTPRD-207ENST00000463477 EPB41L2O43491 1005 aaKnown RBP12.06□□□□□ -0.48
PTPRD-207ENST00000463477 RAB11FIP3O75154 756 aa12.06□□□□□ -0.48
PTPRD-207ENST00000463477 RPS8P62241 208 aaKnown RBP12.06□□□□□ -0.48
PTPRD-207ENST00000463477 TTLL11Q8NHH1 800 aa12.06□□□□□ -0.48
PTPRD-207ENST00000463477 SBF1O95248 1867 aa12.06□□□□□ -0.48
PTPRD-207ENST00000463477 FER1L6Q2WGJ9 1857 aa12.06□□□□□ -0.48
PTPRD-207ENST00000463477 SNED1Q8TER0 1413 aa12.05□□□□□ -0.48
PTPRD-207ENST00000463477 SMARCA5O60264 1052 aaPredicted RBP12.05□□□□□ -0.48
PTPRD-207ENST00000463477 UBTFL1P0CB47 393 aaPredicted RBP12.05□□□□□ -0.48
PTPRD-207ENST00000463477 PTMSP20962 102 aa12.05□□□□□ -0.48
PTPRD-207ENST00000463477 CTSWP56202 376 aa12.05□□□□□ -0.48
PTPRD-207ENST00000463477 POLA2Q14181 598 aa12.05□□□□□ -0.48
PTPRD-207ENST00000463477 CELF1Q92879 486 aaKnown RBP12.05□□□□□ -0.48
PTPRD-207ENST00000463477 DDX11L8A8MPP1 907 aa12.04□□□□□ -0.48
PTPRD-207ENST00000463477 GRM8O00222 908 aa12.04□□□□□ -0.48
PTPRD-207ENST00000463477 ERC2O15083 957 aa12.04□□□□□ -0.48
PTPRD-207ENST00000463477 CSF1RP07333 972 aa12.04□□□□□ -0.48
PTPRD-207ENST00000463477 RTFDC1Q9BY42 306 aaPredicted RBP12.04□□□□□ -0.48
PTPRD-207ENST00000463477 VPS33BQ9H267 617 aa12.04□□□□□ -0.48
PTPRD-207ENST00000463477 GPBP1L1Q9HC44 474 aaPredicted RBP12.04□□□□□ -0.48
PTPRD-207ENST00000463477 SEC31BQ9NQW1 1179 aa12.04□□□□□ -0.48
PTPRD-207ENST00000463477 LRRFIP2Q9Y608 721 aaKnown RBP12.04□□□□□ -0.48
PTPRD-207ENST00000463477 DDX60Q8IY21 1712 aaKnown RBP12.04□□□□□ -0.48
PTPRD-207ENST00000463477 PNMA6EA0A0J9YXQ4 647 aa12.03□□□□□ -0.48
PTPRD-207ENST00000463477 RAB3GAP1Q15042 981 aa12.03□□□□□ -0.48
PTPRD-207ENST00000463477 CLEC17AQ6ZS10 378 aa12.03□□□□□ -0.48
PTPRD-207ENST00000463477 MPNDQ8N594 471 aa12.03□□□□□ -0.48
PTPRD-207ENST00000463477 IL17RAQ96F46 866 aa12.03□□□□□ -0.48
PTPRD-207ENST00000463477 ZNF277Q9NRM2 450 aaPredicted RBP12.03□□□□□ -0.48
PTPRD-207ENST00000463477 C9orf78Q9NZ63 289 aaPredicted RBP12.03□□□□□ -0.48
PTPRD-207ENST00000463477 HDAC5Q9UQL6 1122 aa12.03□□□□□ -0.48
PTPRD-207ENST00000463477 GLTPD2A6NH11 291 aa12.03□□□□□ -0.48
PTPRD-207ENST00000463477 MX1P20591 662 aa12.03□□□□□ -0.48
PTPRD-207ENST00000463477 IARSP41252 1262 aaKnown RBP12.03□□□□□ -0.48
PTPRD-207ENST00000463477 MTX1Q13505 466 aa12.03□□□□□ -0.48
PTPRD-207ENST00000463477 DPY19L2Q6NUT2 758 aa12.03□□□□□ -0.48
PTPRD-207ENST00000463477 EXOC6BQ9Y2D4 811 aa12.03□□□□□ -0.48
PTPRD-207ENST00000463477 CACNA1SQ13698 1873 aa12.02□□□□□ -0.48
PTPRD-207ENST00000463477 LAMB2P55268 1798 aa12.02□□□□□ -0.48
PTPRD-207ENST00000463477 RTL9Q8NET4 1388 aa12.02□□□□□ -0.49
PTPRD-207ENST00000463477 UTYO14607 1347 aa12.02□□□□□ -0.49
PTPRD-207ENST00000463477 FOXO4P98177 505 aa12.02□□□□□ -0.49
PTPRD-207ENST00000463477 DPP8Q6V1X1 898 aaPredicted RBP12.02□□□□□ -0.49
PTPRD-207ENST00000463477 SUPT20HQ8NEM7 779 aa12.02□□□□□ -0.49
PTPRD-207ENST00000463477 CCDC85AQ96PX6 553 aaPredicted RBP12.02□□□□□ -0.49
PTPRD-207ENST00000463477 CDC5LQ99459 802 aaKnown RBP12.02□□□□□ -0.49
PTPRD-207ENST00000463477 GREM2Q9H772 168 aa12.02□□□□□ -0.49
PTPRD-207ENST00000463477 CD2BP2O95400 341 aaKnown RBP12.01□□□□□ -0.49
PTPRD-207ENST00000463477 HSP90AB4PQ58FF6 505 aa12.01□□□□□ -0.49
PTPRD-207ENST00000463477 SLC51AQ86UW1 340 aa12.01□□□□□ -0.49
PTPRD-207ENST00000463477 ANKRD18AQ8IVF6 992 aa12.01□□□□□ -0.49
PTPRD-207ENST00000463477 SPRYD3Q8NCJ5 442 aa12.01□□□□□ -0.49
PTPRD-207ENST00000463477 ZNF526Q8TF50 670 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms