RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 COPS6Q7L5N1 327 aa11.83□□□□□ -0.52
SRRM1-205ENST00000462710 XAGE3Q8WTP9 111 aa11.83□□□□□ -0.52
SRRM1-205ENST00000462710 PCGF6Q9BYE7 350 aa11.83□□□□□ -0.52
SRRM1-205ENST00000462710 INTS3Q68E01 1043 aaKnown RBP11.82□□□□□ -0.52
SRRM1-205ENST00000462710 HYPKQ9NX55 129 aa11.82□□□□□ -0.52
SRRM1-205ENST00000462710 POLLQ9UGP5 575 aa11.82□□□□□ -0.52
SRRM1-205ENST00000462710 ALDH1A1P00352 501 aa11.82□□□□□ -0.52
SRRM1-205ENST00000462710 ATP2B4P23634 1241 aa11.82□□□□□ -0.52
SRRM1-205ENST00000462710 NGEFQ8N5V2 710 aa11.82□□□□□ -0.52
SRRM1-205ENST00000462710 SREBF2Q12772 1141 aa11.81□□□□□ -0.52
SRRM1-205ENST00000462710 PODNQ7Z5L7 613 aa11.81□□□□□ -0.52
SRRM1-205ENST00000462710 CCER1Q8TC90 406 aaPredicted RBP11.81□□□□□ -0.52
SRRM1-205ENST00000462710 MED23Q9ULK4 1368 aa11.81□□□□□ -0.52
SRRM1-205ENST00000462710 HCLS1P14317 486 aaPredicted RBP11.81□□□□□ -0.52
SRRM1-205ENST00000462710 INHBEP58166 350 aa11.81□□□□□ -0.52
SRRM1-205ENST00000462710 RPS8P62241 208 aaKnown RBP11.81□□□□□ -0.52
SRRM1-205ENST00000462710 SAMD7Q7Z3H4 446 aa11.81□□□□□ -0.52
SRRM1-205ENST00000462710 ZNF408Q9H9D4 720 aa11.81□□□□□ -0.52
SRRM1-205ENST00000462710 ADM5C9JUS6 153 aa11.8□□□□□ -0.52
SRRM1-205ENST00000462710 GRM1Q13255 1194 aa11.8□□□□□ -0.52
SRRM1-205ENST00000462710 MAP3K11Q16584 847 aa11.8□□□□□ -0.52
SRRM1-205ENST00000462710 PROSER3Q2NL68 480 aa11.8□□□□□ -0.52
SRRM1-205ENST00000462710 DBF4Q9UBU7 674 aaPredicted RBP11.8□□□□□ -0.52
SRRM1-205ENST00000462710 TBC1D10BQ4KMP7 808 aaPredicted RBP11.8□□□□□ -0.52
SRRM1-205ENST00000462710 SLC51AQ86UW1 340 aa11.8□□□□□ -0.52
SRRM1-205ENST00000462710 ZBTB38Q8NAP3 1195 aaPredicted RBP11.8□□□□□ -0.52
SRRM1-205ENST00000462710 GGA3Q9NZ52 723 aa11.8□□□□□ -0.52
SRRM1-205ENST00000462710 MYH3P11055 1940 aa11.8□□□□□ -0.52
SRRM1-205ENST00000462710 SHTN1A0MZ66 631 aa11.79□□□□□ -0.52
SRRM1-205ENST00000462710 CELF1Q92879 486 aaKnown RBP11.79□□□□□ -0.52
SRRM1-205ENST00000462710 ZC3H12CQ9C0D7 883 aaKnown RBP11.79□□□□□ -0.52
SRRM1-205ENST00000462710 GGA1Q9UJY5 639 aa11.79□□□□□ -0.52
SRRM1-205ENST00000462710 PPP2R3BQ9Y5P8 575 aa11.79□□□□□ -0.52
SRRM1-205ENST00000462710 TRPA1O75762 1119 aa11.79□□□□□ -0.52
SRRM1-205ENST00000462710 PCCAP05165 728 aaPredicted RBP11.79□□□□□ -0.52
SRRM1-205ENST00000462710 TMPOP42166 694 aaKnown RBP11.79□□□□□ -0.52
SRRM1-205ENST00000462710 ANKRD13DQ6ZTN6 518 aa11.79□□□□□ -0.52
SRRM1-205ENST00000462710 ZBTB12Q9Y330 459 aaPredicted RBP11.79□□□□□ -0.52
SRRM1-205ENST00000462710 SCARF1Q14162 830 aa11.78□□□□□ -0.52
SRRM1-205ENST00000462710 ZBED3Q96IU2 234 aaPredicted RBP11.78□□□□□ -0.52
SRRM1-205ENST00000462710 XDHP47989 1333 aa11.78□□□□□ -0.52
SRRM1-205ENST00000462710 GPR25O00155 361 aa11.78□□□□□ -0.52
SRRM1-205ENST00000462710 FKTNO75072 461 aa11.78□□□□□ -0.52
SRRM1-205ENST00000462710 RALBP1Q15311 655 aa11.78□□□□□ -0.52
SRRM1-205ENST00000462710 LDLRAD1Q5T700 205 aa11.78□□□□□ -0.52
SRRM1-205ENST00000462710 MTMR14Q8NCE2 650 aa11.78□□□□□ -0.52
SRRM1-205ENST00000462710 CCDC191Q8NCU4 936 aa11.78□□□□□ -0.52
SRRM1-205ENST00000462710 USP17L3A6NCW0 530 aa11.77□□□□□ -0.52
SRRM1-205ENST00000462710 USP17L4A6NCW7 530 aa11.77□□□□□ -0.52
SRRM1-205ENST00000462710 FKBP1AP62942 108 aaKnown RBP11.77□□□□□ -0.52
SRRM1-205ENST00000462710 USP17L1Q7RTZ2 530 aa11.77□□□□□ -0.52
SRRM1-205ENST00000462710 APOBEC3FQ8IUX4 373 aaKnown RBP11.77□□□□□ -0.52
SRRM1-205ENST00000462710 THUMPD2Q9BTF0 503 aaKnown RBP11.77□□□□□ -0.52
SRRM1-205ENST00000462710 DBNDD1Q9H9R9 158 aa11.77□□□□□ -0.52
SRRM1-205ENST00000462710 MYOZ2Q9NPC6 264 aa11.77□□□□□ -0.52
SRRM1-205ENST00000462710 NSFL1CQ9UNZ2 370 aaKnown RBP11.77□□□□□ -0.52
SRRM1-205ENST00000462710 C6orf229H3BNL8 230 aa11.77□□□□□ -0.53
SRRM1-205ENST00000462710 TCERG1O14776 1098 aaKnown RBP11.77□□□□□ -0.53
SRRM1-205ENST00000462710 PDE8AO60658 829 aa11.77□□□□□ -0.53
SRRM1-205ENST00000462710 USP17L8P0C7I0 530 aa11.77□□□□□ -0.53
SRRM1-205ENST00000462710 SOX10P56693 466 aa11.77□□□□□ -0.53
SRRM1-205ENST00000462710 RIPK4P57078 832 aa11.77□□□□□ -0.53
SRRM1-205ENST00000462710 CCDC152Q4G0S7 254 aa11.77□□□□□ -0.53
SRRM1-205ENST00000462710 MANSC4A6NHS7 340 aaPredicted RBP11.76□□□□□ -0.53
SRRM1-205ENST00000462710 IRS4O14654 1257 aaPredicted RBP11.76□□□□□ -0.53
SRRM1-205ENST00000462710 EGFRP00533 1210 aa11.76□□□□□ -0.53
SRRM1-205ENST00000462710 CAPN2P17655 700 aa11.76□□□□□ -0.53
SRRM1-205ENST00000462710 NF2P35240 595 aa11.76□□□□□ -0.53
SRRM1-205ENST00000462710 C15orf52Q6ZUT6 534 aaKnown RBP11.76□□□□□ -0.53
SRRM1-205ENST00000462710 ZNF296Q8WUU4 475 aaPredicted RBP11.76□□□□□ -0.53
SRRM1-205ENST00000462710 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
SRRM1-205ENST00000462710 HDAC9Q9UKV0 1011 aa11.76□□□□□ -0.53
SRRM1-205ENST00000462710 ZBTB48P10074 688 aaPredicted RBP11.75□□□□□ -0.53
SRRM1-205ENST00000462710 EIF2S2P20042 333 aaKnown RBP11.75□□□□□ -0.53
SRRM1-205ENST00000462710 STRIP1Q5VSL9 837 aa11.75□□□□□ -0.53
SRRM1-205ENST00000462710 ANGEL2Q5VTE6 544 aaKnown RBP11.75□□□□□ -0.53
SRRM1-205ENST00000462710 ARMC9Q7Z3E5 817 aa11.75□□□□□ -0.53
SRRM1-205ENST00000462710 TESPA1A2RU30 521 aaPredicted RBP11.75□□□□□ -0.53
SRRM1-205ENST00000462710 ARMC5Q96C12 935 aa11.75□□□□□ -0.53
SRRM1-205ENST00000462710 COA1Q9GZY4 146 aa11.75□□□□□ -0.53
SRRM1-205ENST00000462710 A0A1B0GUL6 1792 aa11.75□□□□□ -0.53
SRRM1-205ENST00000462710 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
SRRM1-205ENST00000462710 LEMD3Q9Y2U8 911 aa11.74□□□□□ -0.53
SRRM1-205ENST00000462710 UFL1O94874 794 aa11.74□□□□□ -0.53
SRRM1-205ENST00000462710 CHPF2Q9P2E5 772 aa11.74□□□□□ -0.53
SRRM1-205ENST00000462710 ARAP2Q8WZ64 1704 aa11.74□□□□□ -0.53
SRRM1-205ENST00000462710 DACT2Q5SW24 774 aa11.73□□□□□ -0.53
SRRM1-205ENST00000462710 HDGFL1Q5TGJ6 251 aa11.73□□□□□ -0.53
SRRM1-205ENST00000462710 CDC5LQ99459 802 aaKnown RBP11.73□□□□□ -0.53
SRRM1-205ENST00000462710 BSDC1Q9NW68 430 aaPredicted RBP11.73□□□□□ -0.53
SRRM1-205ENST00000462710 RIMBP2O15034 1052 aa11.73□□□□□ -0.53
SRRM1-205ENST00000462710 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
SRRM1-205ENST00000462710 SPRYD7Q5W111 196 aa11.73□□□□□ -0.53
SRRM1-205ENST00000462710 ERO1AQ96HE7 468 aa11.73□□□□□ -0.53
SRRM1-205ENST00000462710 PLA2G12BQ9BX93 195 aa11.73□□□□□ -0.53
SRRM1-205ENST00000462710 CALD1Q05682 793 aaKnown RBP11.73□□□□□ -0.53
SRRM1-205ENST00000462710 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
SRRM1-205ENST00000462710 ANKRD18AQ8IVF6 992 aa11.73□□□□□ -0.53
SRRM1-205ENST00000462710 RUNDC1Q96C34 613 aa11.73□□□□□ -0.53
SRRM1-205ENST00000462710 FAM89AQ96GI7 184 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms