RNA–Protein interactions for RNA: ENST00000456235.1

LINC01563-201, Transcript of long intergenic non-protein coding RNA 1563, humanhuman

TSL 2 BASIC

Gene LINC01563, Length 750 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01563-201ENST00000456235 C6orf229H3BNL8 230 aa17.67■□□□□ 0.42
LINC01563-201ENST00000456235 SNAP23O00161 211 aa17.67■□□□□ 0.42
LINC01563-201ENST00000456235 UFL1O94874 794 aa17.67■□□□□ 0.42
LINC01563-201ENST00000456235 IGHMBP2P38935 993 aaKnown RBP17.67■□□□□ 0.42
LINC01563-201ENST00000456235 TAF7LQ5H9L4 462 aa17.67■□□□□ 0.42
LINC01563-201ENST00000456235 HELBQ8NG08 1087 aaPredicted RBP17.67■□□□□ 0.42
LINC01563-201ENST00000456235 PUS3Q9BZE2 481 aaKnown RBP17.67■□□□□ 0.42
LINC01563-201ENST00000456235 CCDC57Q2TAC2 916 aa17.66■□□□□ 0.42
LINC01563-201ENST00000456235 CC2D2BQ6DHV5 1058 aa17.66■□□□□ 0.42
LINC01563-201ENST00000456235 LARGE2Q8N3Y3 721 aa17.66■□□□□ 0.42
LINC01563-201ENST00000456235 MPHOSPH8Q99549 860 aa17.66■□□□□ 0.42
LINC01563-201ENST00000456235 TAF5LO75529 589 aa17.65■□□□□ 0.42
LINC01563-201ENST00000456235 KLRK1P26718 216 aa17.65■□□□□ 0.42
LINC01563-201ENST00000456235 TMC4Q7Z404 712 aa17.65■□□□□ 0.42
LINC01563-201ENST00000456235 TBC1D16Q8TBP0 767 aa17.65■□□□□ 0.42
LINC01563-201ENST00000456235 MINPP1Q9UNW1 487 aa17.65■□□□□ 0.42
LINC01563-201ENST00000456235 SCN9AQ15858 1988 aa17.64■□□□□ 0.41
LINC01563-201ENST00000456235 DOK7Q18PE1 504 aa17.64■□□□□ 0.41
LINC01563-201ENST00000456235 RABL6Q3YEC7 729 aaPredicted RBP17.64■□□□□ 0.41
LINC01563-201ENST00000456235 DBNDD1Q9H9R9 158 aa17.64■□□□□ 0.41
LINC01563-201ENST00000456235 NMRK2Q9NPI5 230 aa17.64■□□□□ 0.41
LINC01563-201ENST00000456235 BSDC1Q9NW68 430 aaPredicted RBP17.64■□□□□ 0.41
LINC01563-201ENST00000456235 COG6Q9Y2V7 657 aa17.64■□□□□ 0.41
LINC01563-201ENST00000456235 CHRNDQ07001 517 aa17.63■□□□□ 0.41
LINC01563-201ENST00000456235 LRRC24Q50LG9 513 aa17.63■□□□□ 0.41
LINC01563-201ENST00000456235 SIL1Q9H173 461 aa17.63■□□□□ 0.41
LINC01563-201ENST00000456235 GPBP1L1Q9HC44 474 aaPredicted RBP17.63■□□□□ 0.41
LINC01563-201ENST00000456235 CNNM1Q9NRU3 951 aa17.63■□□□□ 0.41
LINC01563-201ENST00000456235 GGA1Q9UJY5 639 aa17.63■□□□□ 0.41
LINC01563-201ENST00000456235 XDHP47989 1333 aa17.63■□□□□ 0.41
LINC01563-201ENST00000456235 DDNO94850 711 aaPredicted RBP17.62■□□□□ 0.41
LINC01563-201ENST00000456235 NIM1KQ8IY84 436 aa17.62■□□□□ 0.41
LINC01563-201ENST00000456235 RTFDC1Q9BY42 306 aaPredicted RBP17.62■□□□□ 0.41
LINC01563-201ENST00000456235 PA2G4Q9UQ80 394 aaKnown RBP17.62■□□□□ 0.41
LINC01563-201ENST00000456235 RFX5P48382 616 aaPredicted RBP17.61■□□□□ 0.41
LINC01563-201ENST00000456235 WASHC4Q2M389 1173 aa17.61■□□□□ 0.41
LINC01563-201ENST00000456235 LDHAL6AQ6ZMR3 332 aa17.61■□□□□ 0.41
LINC01563-201ENST00000456235 SUPT20HQ8NEM7 779 aa17.61■□□□□ 0.41
LINC01563-201ENST00000456235 JDP2Q8WYK2 163 aa17.61■□□□□ 0.41
LINC01563-201ENST00000456235 GJA3Q9Y6H8 435 aa17.61■□□□□ 0.41
LINC01563-201ENST00000456235 ZNF646O15015 1829 aaPredicted RBP17.61■□□□□ 0.41
LINC01563-201ENST00000456235 YDJCA8MPS7 323 aa17.6■□□□□ 0.41
LINC01563-201ENST00000456235 GNAI3P08754 354 aa17.6■□□□□ 0.41
LINC01563-201ENST00000456235 KIAA2012Q0VF49 1180 aa17.6■□□□□ 0.41
LINC01563-201ENST00000456235 TXNRD3Q86VQ6 643 aa17.6■□□□□ 0.41
LINC01563-201ENST00000456235 PIAS4Q8N2W9 510 aaPredicted RBP17.6■□□□□ 0.41
LINC01563-201ENST00000456235 KCNQ5Q9NR82 932 aa17.6■□□□□ 0.41
LINC01563-201ENST00000456235 WDR90Q96KV7 1748 aa17.6■□□□□ 0.41
LINC01563-201ENST00000456235 RAD17O75943 681 aa17.59■□□□□ 0.41
LINC01563-201ENST00000456235 KCNJ4P48050 445 aa17.59■□□□□ 0.41
LINC01563-201ENST00000456235 GRIPAP1Q4V328 841 aa17.59■□□□□ 0.41
LINC01563-201ENST00000456235 RRAGCQ9HB90 399 aa17.59■□□□□ 0.41
LINC01563-201ENST00000456235 PODXL2Q9NZ53 605 aa17.59■□□□□ 0.41
LINC01563-201ENST00000456235 PNMA6EA0A0J9YXQ4 647 aa17.58■□□□□ 0.4
LINC01563-201ENST00000456235 FZD9O00144 591 aa17.58■□□□□ 0.4
LINC01563-201ENST00000456235 ECE2O60344 883 aa17.58■□□□□ 0.4
LINC01563-201ENST00000456235 GNAI2P04899 355 aa17.58■□□□□ 0.4
LINC01563-201ENST00000456235 ATP2B4P23634 1241 aa17.58■□□□□ 0.4
LINC01563-201ENST00000456235 PSME4Q14997 1843 aa17.58■□□□□ 0.4
LINC01563-201ENST00000456235 ZNF804BA4D1E1 1349 aa17.57■□□□□ 0.4
LINC01563-201ENST00000456235 GLTPD2A6NH11 291 aa17.57■□□□□ 0.4
LINC01563-201ENST00000456235 ZBTB7BO15156 539 aaPredicted RBP17.57■□□□□ 0.4
LINC01563-201ENST00000456235 SRGAP3O43295 1099 aa17.57■□□□□ 0.4
LINC01563-201ENST00000456235 RRP1P56182 461 aaKnown RBP17.57■□□□□ 0.4
LINC01563-201ENST00000456235 PTPN12Q05209 780 aaKnown RBP17.57■□□□□ 0.4
LINC01563-201ENST00000456235 MVPQ14764 893 aaKnown RBP17.57■□□□□ 0.4
LINC01563-201ENST00000456235 EYA3Q99504 573 aa17.57■□□□□ 0.4
LINC01563-201ENST00000456235 KDM2BQ8NHM5 1336 aa17.56■□□□□ 0.4
LINC01563-201ENST00000456235 ZC3H4Q9UPT8 1303 aaKnown RBP17.56■□□□□ 0.4
LINC01563-201ENST00000456235 EIF6P56537 245 aaKnown RBP17.56■□□□□ 0.4
LINC01563-201ENST00000456235 METTL24Q5JXM2 366 aa17.56■□□□□ 0.4
LINC01563-201ENST00000456235 FBXW7Q969H0 707 aa17.56■□□□□ 0.4
LINC01563-201ENST00000456235 ZC3H12CQ9C0D7 883 aaKnown RBP17.56■□□□□ 0.4
LINC01563-201ENST00000456235 ANKRD2Q9GZV1 360 aa17.56■□□□□ 0.4
LINC01563-201ENST00000456235 MED23Q9ULK4 1368 aa17.55■□□□□ 0.4
LINC01563-201ENST00000456235 SHTN1A0MZ66 631 aa17.55■□□□□ 0.4
LINC01563-201ENST00000456235 G3V3G9 751 aa17.55■□□□□ 0.4
LINC01563-201ENST00000456235 CXCL9Q07325 125 aa17.55■□□□□ 0.4
LINC01563-201ENST00000456235 DCAF8Q5TAQ9 597 aa17.55■□□□□ 0.4
LINC01563-201ENST00000456235 ZNRF3Q9ULT6 936 aa17.55■□□□□ 0.4
LINC01563-201ENST00000456235 JAG2Q9Y219 1238 aa17.55■□□□□ 0.4
LINC01563-201ENST00000456235 RIPOR2Q9Y4F9 1068 aa17.55■□□□□ 0.4
LINC01563-201ENST00000456235 POTECB2RU33 542 aa17.54■□□□□ 0.4
LINC01563-201ENST00000456235 KIF3CO14782 793 aa17.54■□□□□ 0.4
LINC01563-201ENST00000456235 DPY19L2Q6NUT2 758 aa17.54■□□□□ 0.4
LINC01563-201ENST00000456235 MXD3Q9BW11 206 aa17.54■□□□□ 0.4
LINC01563-201ENST00000456235 ZBTB12Q9Y330 459 aaPredicted RBP17.54■□□□□ 0.4
LINC01563-201ENST00000456235 ARAP2Q8WZ64 1704 aa17.53■□□□□ 0.4
LINC01563-201ENST00000456235 MYH13Q9UKX3 1938 aa17.53■□□□□ 0.4
LINC01563-201ENST00000456235 EYA2O00167 538 aa17.53■□□□□ 0.4
LINC01563-201ENST00000456235 ATG9AQ7Z3C6 839 aa17.53■□□□□ 0.4
LINC01563-201ENST00000456235 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
LINC01563-201ENST00000456235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
LINC01563-201ENST00000456235 SCN4AP35499 1836 aa17.53■□□□□ 0.4
LINC01563-201ENST00000456235 IRS2Q9Y4H2 1338 aa17.52■□□□□ 0.4
LINC01563-201ENST00000456235 PSMD14O00487 310 aa17.52■□□□□ 0.4
LINC01563-201ENST00000456235 POTEIP0CG38 1075 aa17.52■□□□□ 0.4
LINC01563-201ENST00000456235 POTEJP0CG39 1038 aa17.52■□□□□ 0.4
LINC01563-201ENST00000456235 GMPSP49915 693 aaPredicted RBP17.52■□□□□ 0.4
LINC01563-201ENST00000456235 CIAPIN1Q6FI81 312 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms