RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.83■□□□□ 0.93
CALD1-209ENST00000436461 LRRC37AA6NMS7 1700 aa20.83■□□□□ 0.93
CALD1-209ENST00000436461 C21orf2O43822 256 aa20.82■□□□□ 0.92
CALD1-209ENST00000436461 BBOX1O75936 387 aa20.82■□□□□ 0.92
CALD1-209ENST00000436461 BCS1LQ9Y276 419 aa20.82■□□□□ 0.92
CALD1-209ENST00000436461 RIPOR2Q9Y4F9 1068 aa20.82■□□□□ 0.92
CALD1-209ENST00000436461 GTF3C3Q9Y5Q9 886 aa20.82■□□□□ 0.92
CALD1-209ENST00000436461 OS9Q13438 667 aaPredicted RBP20.82■□□□□ 0.92
CALD1-209ENST00000436461 DALRD3Q5D0E6 543 aaKnown RBP20.82■□□□□ 0.92
CALD1-209ENST00000436461 RWDD1Q9H446 243 aaPredicted RBP20.82■□□□□ 0.92
CALD1-209ENST00000436461 MINPP1Q9UNW1 487 aa20.82■□□□□ 0.92
CALD1-209ENST00000436461 NOP58Q9Y2X3 529 aaKnown RBP20.82■□□□□ 0.92
CALD1-209ENST00000436461 TAF5LO75529 589 aa20.81■□□□□ 0.92
CALD1-209ENST00000436461 CHRNDQ07001 517 aa20.81■□□□□ 0.92
CALD1-209ENST00000436461 G3BP1Q13283 466 aaKnown RBP eCLIP20.81■□□□□ 0.928e-9■□□□□ 9.6
CALD1-209ENST00000436461 CCDC136Q96JN2 1154 aa20.81■□□□□ 0.92
CALD1-209ENST00000436461 DCTPP1Q9H773 170 aa20.81■□□□□ 0.92
CALD1-209ENST00000436461 WTIPA6NIX2 430 aaPredicted RBP20.8■□□□□ 0.92
CALD1-209ENST00000436461 SNAP23O00161 211 aa20.8■□□□□ 0.92
CALD1-209ENST00000436461 SASH1O94885 1247 aa20.8■□□□□ 0.92
CALD1-209ENST00000436461 ERICH6BQ5W0A0 696 aa20.8■□□□□ 0.92
CALD1-209ENST00000436461 ATP6V0A2Q9Y487 856 aa20.8■□□□□ 0.92
CALD1-209ENST00000436461 CIAO1O76071 339 aa20.79■□□□□ 0.92
CALD1-209ENST00000436461 METTL24Q5JXM2 366 aa20.79■□□□□ 0.92
CALD1-209ENST00000436461 C7orf43Q8WVR3 580 aa20.79■□□□□ 0.92
CALD1-209ENST00000436461 PPP4R2Q9NY27 417 aa20.79■□□□□ 0.92
CALD1-209ENST00000436461 ARFGEF1Q9Y6D6 1849 aa20.79■□□□□ 0.92
CALD1-209ENST00000436461 IL15P40933 162 aaPredicted RBP20.78■□□□□ 0.92
CALD1-209ENST00000436461 GPSM2P81274 684 aa20.78■□□□□ 0.92
CALD1-209ENST00000436461 TFCP2Q12800 502 aa20.78■□□□□ 0.92
CALD1-209ENST00000436461 SP8Q8IXZ3 490 aa20.78■□□□□ 0.92
CALD1-209ENST00000436461 PELP1Q8IZL8 1130 aaKnown RBP20.78■□□□□ 0.92
CALD1-209ENST00000436461 SMARCA5O60264 1052 aaPredicted RBP20.78■□□□□ 0.92
CALD1-209ENST00000436461 NSFL1CQ9UNZ2 370 aaKnown RBP20.78■□□□□ 0.92
CALD1-209ENST00000436461 LTBP1Q14766 1721 aa20.77■□□□□ 0.92
CALD1-209ENST00000436461 VGLL2Q8N8G2 317 aa20.77■□□□□ 0.92
CALD1-209ENST00000436461 IL1RAPL2Q9NP60 686 aa20.77■□□□□ 0.92
CALD1-209ENST00000436461 ANKIB1Q9P2G1 1089 aa20.77■□□□□ 0.92
CALD1-209ENST00000436461 MROH5Q6ZUA9 1318 aa20.76■□□□□ 0.91
CALD1-209ENST00000436461 GPR101Q96P66 508 aaPredicted RBP20.76■□□□□ 0.91
CALD1-209ENST00000436461 FBXO3Q9UK99 471 aa20.76■□□□□ 0.91
CALD1-209ENST00000436461 DUOX1Q9NRD9 1551 aa20.76■□□□□ 0.91
CALD1-209ENST00000436461 TMC4Q7Z404 712 aa20.75■□□□□ 0.91
CALD1-209ENST00000436461 RHPN1Q8TCX5 695 aa20.75■□□□□ 0.91
CALD1-209ENST00000436461 SNED1Q8TER0 1413 aa20.75■□□□□ 0.91
CALD1-209ENST00000436461 KDM2BQ8NHM5 1336 aa20.75■□□□□ 0.91
CALD1-209ENST00000436461 YBX3P16989 372 aaKnown RBP eCLIP20.75■□□□□ 0.91
CALD1-209ENST00000436461 SMC5Q8IY18 1101 aa20.75■□□□□ 0.91
CALD1-209ENST00000436461 CEP126Q9P2H0 1117 aa20.75■□□□□ 0.91
CALD1-209ENST00000436461 PDE8BO95263 885 aa20.74■□□□□ 0.91
CALD1-209ENST00000436461 HSP90AB4PQ58FF6 505 aa20.74■□□□□ 0.91
CALD1-209ENST00000436461 GCC1Q96CN9 775 aa20.74■□□□□ 0.91
CALD1-209ENST00000436461 TMX4Q9H1E5 349 aaPredicted RBP20.74■□□□□ 0.91
CALD1-209ENST00000436461 FER1L6Q2WGJ9 1857 aa20.73■□□□□ 0.91
CALD1-209ENST00000436461 XDHP47989 1333 aa20.73■□□□□ 0.91
CALD1-209ENST00000436461 RAB11FIP3O75154 756 aa20.73■□□□□ 0.91
CALD1-209ENST00000436461 CCDC93Q567U6 631 aa20.73■□□□□ 0.91
CALD1-209ENST00000436461 ANKRD45Q5TZF3 282 aa20.73■□□□□ 0.91
CALD1-209ENST00000436461 MPNDQ8N594 471 aa20.73■□□□□ 0.91
CALD1-209ENST00000436461 KIF1BPQ96EK5 621 aa20.73■□□□□ 0.91
CALD1-209ENST00000436461 POLLQ9UGP5 575 aa20.73■□□□□ 0.91
CALD1-209ENST00000436461 UFL1O94874 794 aa20.72■□□□□ 0.91
CALD1-209ENST00000436461 KLRK1P26718 216 aa20.72■□□□□ 0.91
CALD1-209ENST00000436461 DPP8Q6V1X1 898 aaPredicted RBP20.72■□□□□ 0.91
CALD1-209ENST00000436461 ERC1Q8IUD2 1116 aa20.72■□□□□ 0.91
CALD1-209ENST00000436461 LRRCC1Q9C099 1032 aa20.72■□□□□ 0.91
CALD1-209ENST00000436461 ANKRD2Q9GZV1 360 aa20.72■□□□□ 0.91
CALD1-209ENST00000436461 TIMM10P62072 90 aa20.71■□□□□ 0.91
CALD1-209ENST00000436461 TBC1D16Q8TBP0 767 aa20.71■□□□□ 0.91
CALD1-209ENST00000436461 ZNF609O15014 1411 aa20.71■□□□□ 0.91
CALD1-209ENST00000436461 C6orf229H3BNL8 230 aa20.71■□□□□ 0.91
CALD1-209ENST00000436461 KCNJ4P48050 445 aa20.71■□□□□ 0.91
CALD1-209ENST00000436461 PODXL2Q9NZ53 605 aa20.71■□□□□ 0.91
CALD1-209ENST00000436461 GGA1Q9UJY5 639 aa20.71■□□□□ 0.91
CALD1-209ENST00000436461 ZNF804BA4D1E1 1349 aa20.7■□□□□ 0.9
CALD1-209ENST00000436461 ATP2B3Q16720 1220 aa20.7■□□□□ 0.9
CALD1-209ENST00000436461 TNNI3KQ59H18 835 aa20.7■□□□□ 0.9
CALD1-209ENST00000436461 EAF2Q96CJ1 260 aaPredicted RBP20.7■□□□□ 0.9
CALD1-209ENST00000436461 LNPKQ9C0E8 428 aa20.7■□□□□ 0.9
CALD1-209ENST00000436461 CCDC8Q9H0W5 538 aaPredicted RBP20.7■□□□□ 0.9
CALD1-209ENST00000436461 FPGT-TNNI3KV9GXZ4 949 aa20.7■□□□□ 0.9
CALD1-209ENST00000436461 A0A1B0GUL7 405 aa20.69■□□□□ 0.9
CALD1-209ENST00000436461 NFKBIEO00221 500 aa20.69■□□□□ 0.9
CALD1-209ENST00000436461 FGFR2P21802 821 aa20.69■□□□□ 0.9
CALD1-209ENST00000436461 ADORA1P30542 326 aa20.69■□□□□ 0.9
CALD1-209ENST00000436461 RASSF7Q02833 373 aa20.69■□□□□ 0.9
CALD1-209ENST00000436461 PUM3Q15397 648 aaKnown RBP20.69■□□□□ 0.9
CALD1-209ENST00000436461 CC2D2BQ6DHV5 1058 aa20.69■□□□□ 0.9
CALD1-209ENST00000436461 CENPQQ7L2Z9 268 aaPredicted RBP20.69■□□□□ 0.9
CALD1-209ENST00000436461 TXNRD3Q86VQ6 643 aa20.69■□□□□ 0.9
CALD1-209ENST00000436461 SKAP1Q86WV1 359 aa20.69■□□□□ 0.9
CALD1-209ENST00000436461 C16orf71Q8IYS4 520 aaPredicted RBP20.69■□□□□ 0.9
CALD1-209ENST00000436461 NEUROD6Q96NK8 337 aa20.69■□□□□ 0.9
CALD1-209ENST00000436461 TLR7Q9NYK1 1049 aaKnown RBP20.69■□□□□ 0.9
CALD1-209ENST00000436461 ARAP2Q8WZ64 1704 aa20.69■□□□□ 0.9
CALD1-209ENST00000436461 RIMBP2O15034 1052 aa20.68■□□□□ 0.9
CALD1-209ENST00000436461 ATP2B4P23634 1241 aa20.68■□□□□ 0.9
CALD1-209ENST00000436461 GPR162Q16538 588 aa20.68■□□□□ 0.9
CALD1-209ENST00000436461 AACSQ86V21 672 aa20.68■□□□□ 0.9
CALD1-209ENST00000436461 CCDC88AQ3V6T2 1871 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms