RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 CDC45O75419 566 aa13.51□□□□□ -0.25
SYNC-204ENST00000426909 GRAPQ13588 217 aa13.51□□□□□ -0.25
SYNC-204ENST00000426909 GCKRQ14397 625 aa13.51□□□□□ -0.25
SYNC-204ENST00000426909 CCDC152Q4G0S7 254 aa13.51□□□□□ -0.25
SYNC-204ENST00000426909 HSP90AB4PQ58FF6 505 aa13.51□□□□□ -0.25
SYNC-204ENST00000426909 TTC22Q5TAA0 569 aa13.51□□□□□ -0.25
SYNC-204ENST00000426909 GRAPLQ8TC17 118 aaPredicted RBP13.51□□□□□ -0.25
SYNC-204ENST00000426909 SSH3Q8TE77 659 aa13.51□□□□□ -0.25
SYNC-204ENST00000426909 ZNF526Q8TF50 670 aaPredicted RBP13.51□□□□□ -0.25
SYNC-204ENST00000426909 ATP6V0A2Q9Y487 856 aa13.51□□□□□ -0.25
SYNC-204ENST00000426909 LRRFIP2Q9Y608 721 aaKnown RBP13.51□□□□□ -0.25
SYNC-204ENST00000426909 POLA2Q14181 598 aa13.5□□□□□ -0.25
SYNC-204ENST00000426909 OLFM4Q6UX06 510 aa13.5□□□□□ -0.25
SYNC-204ENST00000426909 PSMD1Q99460 953 aa13.5□□□□□ -0.25
SYNC-204ENST00000426909 C22orf23Q9BZE7 217 aa13.5□□□□□ -0.25
SYNC-204ENST00000426909 LRRCC1Q9C099 1032 aa13.5□□□□□ -0.25
SYNC-204ENST00000426909 SBF1O95248 1867 aa13.5□□□□□ -0.25
SYNC-204ENST00000426909 UTYO14607 1347 aa13.49□□□□□ -0.25
SYNC-204ENST00000426909 AOX1Q06278 1338 aa13.49□□□□□ -0.25
SYNC-204ENST00000426909 PRELPP51888 382 aa13.49□□□□□ -0.25
SYNC-204ENST00000426909 MTX1Q13505 466 aa13.49□□□□□ -0.25
SYNC-204ENST00000426909 CASC1Q6TDU7 716 aa13.49□□□□□ -0.25
SYNC-204ENST00000426909 SP8Q8IXZ3 490 aa13.49□□□□□ -0.25
SYNC-204ENST00000426909 TIAM2Q8IVF5 1701 aa13.49□□□□□ -0.25
SYNC-204ENST00000426909 SNED1Q8TER0 1413 aa13.48□□□□□ -0.25
SYNC-204ENST00000426909 H7C1W4 665 aa13.48□□□□□ -0.25
SYNC-204ENST00000426909 RBM25P49756 843 aaKnown RBP13.48□□□□□ -0.25
SYNC-204ENST00000426909 UBE3BQ7Z3V4 1068 aa13.48□□□□□ -0.25
SYNC-204ENST00000426909 JARID2Q92833 1246 aaPredicted RBP13.48□□□□□ -0.25
SYNC-204ENST00000426909 PNMA6EA0A0J9YXQ4 647 aa13.47□□□□□ -0.25
SYNC-204ENST00000426909 IARSP41252 1262 aaKnown RBP13.47□□□□□ -0.25
SYNC-204ENST00000426909 MFAP1P55081 439 aaKnown RBP13.47□□□□□ -0.25
SYNC-204ENST00000426909 CTSWP56202 376 aa13.47□□□□□ -0.25
SYNC-204ENST00000426909 DPY19L2Q6NUT2 758 aa13.47□□□□□ -0.25
SYNC-204ENST00000426909 DPP8Q6V1X1 898 aaPredicted RBP13.47□□□□□ -0.25
SYNC-204ENST00000426909 SUPT20HQ8NEM7 779 aa13.47□□□□□ -0.25
SYNC-204ENST00000426909 ZNF277Q9NRM2 450 aaPredicted RBP13.47□□□□□ -0.25
SYNC-204ENST00000426909 C9orf78Q9NZ63 289 aaPredicted RBP13.47□□□□□ -0.25
SYNC-204ENST00000426909 GSPT1P15170 499 aaKnown RBP13.46□□□□□ -0.25
SYNC-204ENST00000426909 RPS8P62241 208 aaKnown RBP13.46□□□□□ -0.25
SYNC-204ENST00000426909 TBC1D9Q6ZT07 1266 aa13.46□□□□□ -0.25
SYNC-204ENST00000426909 JDP2Q8WYK2 163 aa13.46□□□□□ -0.25
SYNC-204ENST00000426909 CELF1Q92879 486 aaKnown RBP13.46□□□□□ -0.25
SYNC-204ENST00000426909 VPS33BQ9H267 617 aa13.46□□□□□ -0.25
SYNC-204ENST00000426909 STAP2Q9UGK3 403 aa13.46□□□□□ -0.25
SYNC-204ENST00000426909 SALL3Q9BXA9 1300 aa13.45□□□□□ -0.26
SYNC-204ENST00000426909 GLTPD2A6NH11 291 aa13.45□□□□□ -0.26
SYNC-204ENST00000426909 GRM8O00222 908 aa13.45□□□□□ -0.26
SYNC-204ENST00000426909 NBPF7P0C2Y1 421 aaPredicted RBP13.45□□□□□ -0.26
SYNC-204ENST00000426909 PDE1AP54750 535 aa13.45□□□□□ -0.26
SYNC-204ENST00000426909 MPNDQ8N594 471 aa13.45□□□□□ -0.26
SYNC-204ENST00000426909 TTLL11Q8NHH1 800 aa13.45□□□□□ -0.26
SYNC-204ENST00000426909 KIF1BPQ96EK5 621 aa13.45□□□□□ -0.26
SYNC-204ENST00000426909 CCDC85AQ96PX6 553 aaPredicted RBP13.45□□□□□ -0.26
SYNC-204ENST00000426909 CDC5LQ99459 802 aaKnown RBP13.45□□□□□ -0.26
SYNC-204ENST00000426909 PLA2G12BQ9BX93 195 aa13.45□□□□□ -0.26
SYNC-204ENST00000426909 EXOC6BQ9Y2D4 811 aa13.45□□□□□ -0.26
SYNC-204ENST00000426909 RTL9Q8NET4 1388 aa13.45□□□□□ -0.26
SYNC-204ENST00000426909 DICER1Q9UPY3 1922 aaKnown RBP13.45□□□□□ -0.26
SYNC-204ENST00000426909 SRGAP3O43295 1099 aa13.44□□□□□ -0.26
SYNC-204ENST00000426909 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
SYNC-204ENST00000426909 CASP7P55210 303 aa13.44□□□□□ -0.26
SYNC-204ENST00000426909 ERC1Q8IUD2 1116 aa13.44□□□□□ -0.26
SYNC-204ENST00000426909 ANKRD18AQ8IVF6 992 aa13.44□□□□□ -0.26
SYNC-204ENST00000426909 C16orf71Q8IYS4 520 aaPredicted RBP13.44□□□□□ -0.26
SYNC-204ENST00000426909 LARGE2Q8N3Y3 721 aa13.44□□□□□ -0.26
SYNC-204ENST00000426909 RTFDC1Q9BY42 306 aaPredicted RBP13.44□□□□□ -0.26
SYNC-204ENST00000426909 SEC31BQ9NQW1 1179 aa13.44□□□□□ -0.26
SYNC-204ENST00000426909 LRRC37AA6NMS7 1700 aa13.44□□□□□ -0.26
SYNC-204ENST00000426909 CCDC88AQ3V6T2 1871 aa13.44□□□□□ -0.26
SYNC-204ENST00000426909 PPIP5K2O43314 1243 aa13.43□□□□□ -0.26
SYNC-204ENST00000426909 SURF6O75683 361 aaKnown RBP13.43□□□□□ -0.26
SYNC-204ENST00000426909 MX1P20591 662 aa13.43□□□□□ -0.26
SYNC-204ENST00000426909 SLC51AQ86UW1 340 aa13.43□□□□□ -0.26
SYNC-204ENST00000426909 GREM2Q9H772 168 aa13.43□□□□□ -0.26
SYNC-204ENST00000426909 NMRK2Q9NPI5 230 aa13.43□□□□□ -0.26
SYNC-204ENST00000426909 NSFL1CQ9UNZ2 370 aaKnown RBP13.43□□□□□ -0.26
SYNC-204ENST00000426909 APBB1O00213 710 aa13.42□□□□□ -0.26
SYNC-204ENST00000426909 CSF1RP07333 972 aa13.42□□□□□ -0.26
SYNC-204ENST00000426909 SDSP20132 328 aa13.42□□□□□ -0.26
SYNC-204ENST00000426909 MYH3P11055 1940 aa13.42□□□□□ -0.26
SYNC-204ENST00000426909 TAF1P21675 1872 aa13.42□□□□□ -0.26
SYNC-204ENST00000426909 FZD9O00144 591 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 KIF3CO14782 793 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 REC8O95072 547 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 ITGA6P23229 1130 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 IGHMBP2P38935 993 aaKnown RBP13.41□□□□□ -0.26
SYNC-204ENST00000426909 EIF6P56537 245 aaKnown RBP13.41□□□□□ -0.26
SYNC-204ENST00000426909 C1QTNF8P60827 252 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 AOC3Q16853 763 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 NIM1KQ8IY84 436 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 RHPN1Q8TCX5 695 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 OTUD7AQ8TE49 926 aaPredicted RBP13.41□□□□□ -0.26
SYNC-204ENST00000426909 SNX21Q969T3 373 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 EYA3Q99504 573 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 RRAGCQ9HB90 399 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 ANKIB1Q9P2G1 1089 aa13.41□□□□□ -0.26
SYNC-204ENST00000426909 COL4A1P02462 1669 aa13.4□□□□□ -0.26
SYNC-204ENST00000426909 ANKRD18BA2A2Z9 1011 aa13.4□□□□□ -0.26
SYNC-204ENST00000426909 C6orf229H3BNL8 230 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms