RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 EZRP15311 586 aaKnown RBP16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 ATP2B3Q16720 1220 aa16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 SPA17Q15506 151 aa16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 LMBR1LQ6UX01 489 aa16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 PSMD1Q99460 953 aa16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 FKBP15Q5T1M5 1219 aa16.44■□□□□ 0.22
PCDHA11-201ENST00000398640 CKAP2LQ8IYA6 745 aa16.44■□□□□ 0.22
PCDHA11-201ENST00000398640 TNNI2P48788 182 aa16.44■□□□□ 0.22
PCDHA11-201ENST00000398640 PDE4BQ07343 736 aa16.44■□□□□ 0.22
PCDHA11-201ENST00000398640 PDE6BP35913 854 aa16.44■□□□□ 0.22
PCDHA11-201ENST00000398640 CCDC113Q9H0I3 377 aa16.44■□□□□ 0.22
PCDHA11-201ENST00000398640 CTNNBL1Q8WYA6 563 aaPredicted RBP16.44■□□□□ 0.22
PCDHA11-201ENST00000398640 ABCA9Q8IUA7 1624 aa16.44■□□□□ 0.22
PCDHA11-201ENST00000398640 RAB34Q9BZG1 259 aa16.43■□□□□ 0.22
PCDHA11-201ENST00000398640 MACROD2A1Z1Q3 448 aa16.43■□□□□ 0.22
PCDHA11-201ENST00000398640 CCDC148Q8NFR7 591 aa16.43■□□□□ 0.22
PCDHA11-201ENST00000398640 CARD10Q9BWT7 1032 aa16.43■□□□□ 0.22
PCDHA11-201ENST00000398640 LARGE2Q8N3Y3 721 aa16.43■□□□□ 0.22
PCDHA11-201ENST00000398640 FERMT2Q96AC1 680 aa16.43■□□□□ 0.22
PCDHA11-201ENST00000398640 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.43■□□□□ 0.22
PCDHA11-201ENST00000398640 ZNF408Q9H9D4 720 aa16.43■□□□□ 0.22
PCDHA11-201ENST00000398640 CPLX3Q8WVH0 158 aa16.43■□□□□ 0.22
PCDHA11-201ENST00000398640 CIZ1Q9ULV3 898 aaPredicted RBP16.43■□□□□ 0.22
PCDHA11-201ENST00000398640 PDIA4P13667 645 aaKnown RBP16.43■□□□□ 0.22
PCDHA11-201ENST00000398640 EIF3JO75822 258 aaKnown RBP16.42■□□□□ 0.22
PCDHA11-201ENST00000398640 CCDC178Q5BJE1 867 aa16.42■□□□□ 0.22
PCDHA11-201ENST00000398640 BEGAINQ9BUH8 593 aa16.42■□□□□ 0.22
PCDHA11-201ENST00000398640 UFL1O94874 794 aa16.42■□□□□ 0.22
PCDHA11-201ENST00000398640 BICD1Q96G01 975 aa16.42■□□□□ 0.22
PCDHA11-201ENST00000398640 ALDH1B1P30837 517 aa16.42■□□□□ 0.22
PCDHA11-201ENST00000398640 TMEM67Q5HYA8 995 aa16.42■□□□□ 0.22
PCDHA11-201ENST00000398640 IL13P35225 146 aa16.42■□□□□ 0.22
PCDHA11-201ENST00000398640 MAP3K9P80192 1104 aa16.42■□□□□ 0.22
PCDHA11-201ENST00000398640 DNAJC10Q8IXB1 793 aa16.42■□□□□ 0.22
PCDHA11-201ENST00000398640 CETN2P41208 172 aa16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 PUF60Q9UHX1 559 aaKnown RBP16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 GOPCQ9HD26 462 aa16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 STX8Q9UNK0 236 aa16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 IL15P40933 162 aaPredicted RBP16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 DPP8Q6V1X1 898 aaPredicted RBP16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 MCM4P33991 863 aa16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 CCDC66A2RUB6 948 aa16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 PANK2Q9BZ23 570 aa16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 MMRN2Q9H8L6 949 aa16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 THRAP3Q9Y2W1 955 aaKnown RBP16.41■□□□□ 0.22
PCDHA11-201ENST00000398640 CYP7A1P22680 504 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 USP8P40818 1118 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 PLBD2Q8NHP8 589 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 GGA1Q9UJY5 639 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 NIM1KQ8IY84 436 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 SYCP3Q8IZU3 236 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 LINS1Q8NG48 757 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 MFSD6Q6ZSS7 791 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 C8orf58Q8NAV2 365 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 SOS1Q07889 1333 aaPredicted RBP16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 GOLGA6L7A0A1B0GV03 622 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 RBM6P78332 1123 aaKnown RBP16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 CNNM3Q8NE01 707 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 SH3TC1Q8TE82 1336 aa16.4■□□□□ 0.22
PCDHA11-201ENST00000398640 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.22
PCDHA11-201ENST00000398640 TRIM27P14373 513 aa16.39■□□□□ 0.21
PCDHA11-201ENST00000398640 TDRD12Q587J7 1177 aaKnown RBP16.39■□□□□ 0.21
PCDHA11-201ENST00000398640 NUP88Q99567 741 aaPredicted RBP16.39■□□□□ 0.21
PCDHA11-201ENST00000398640 JAG2Q9Y219 1238 aa16.39■□□□□ 0.21
PCDHA11-201ENST00000398640 NAA16Q6N069 864 aaPredicted RBP16.39■□□□□ 0.21
PCDHA11-201ENST00000398640 BABAM1Q9NWV8 329 aa16.39■□□□□ 0.21
PCDHA11-201ENST00000398640 PHACTR3Q96KR7 559 aa16.39■□□□□ 0.21
PCDHA11-201ENST00000398640 LGR6Q9HBX8 967 aa16.39■□□□□ 0.21
PCDHA11-201ENST00000398640 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
PCDHA11-201ENST00000398640 ISM2Q6H9L7 571 aa16.39■□□□□ 0.21
PCDHA11-201ENST00000398640 PRKCSHP14314 528 aaPredicted RBP16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 PHAXQ9H814 394 aaKnown RBP16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 KIF5BP33176 963 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 DPY19L2Q6NUT2 758 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 MICU3Q86XE3 530 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 GDPD2Q9HCC8 539 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 ECHDC1Q9NTX5 307 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 BIN1O00499 593 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 PHKG2P15735 406 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 SSFA2P28290 1259 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 TCERG1LQ5VWI1 586 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 TET3O43151 1660 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 PRDM15P57071 1507 aaPredicted RBP16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 FAM182BQ5T319 152 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 EVI5LQ96CN4 794 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 ANO10Q9NW15 660 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 A1BGP04217 495 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 COMMD10Q9Y6G5 202 aa16.38■□□□□ 0.21
PCDHA11-201ENST00000398640 JCADQ9P266 1359 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 IDEP14735 1019 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 DYDC1Q8WWB3 177 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 TOP1P11387 765 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms