RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 SAMD7Q7Z3H4 446 aa8.54□□□□□ -1.04
ITGB1-201ENST00000302278 TBC1D16Q8TBP0 767 aa8.54□□□□□ -1.04
ITGB1-201ENST00000302278 RRP7AQ9Y3A4 280 aaKnown RBP8.54□□□□□ -1.04
ITGB1-201ENST00000302278 SOX10P56693 466 aa8.54□□□□□ -1.04
ITGB1-201ENST00000302278 PLBD2Q8NHP8 589 aa8.54□□□□□ -1.04
ITGB1-201ENST00000302278 GRM1Q13255 1194 aa8.53□□□□□ -1.04
ITGB1-201ENST00000302278 RSBN1LQ6PCB5 846 aaPredicted RBP8.53□□□□□ -1.04
ITGB1-201ENST00000302278 ZBTB12Q9Y330 459 aaPredicted RBP8.53□□□□□ -1.04
ITGB1-201ENST00000302278 GGA3Q9NZ52 723 aa8.53□□□□□ -1.04
ITGB1-201ENST00000302278 MED23Q9ULK4 1368 aa8.53□□□□□ -1.04
ITGB1-201ENST00000302278 CACNA1FO60840 1977 aa8.53□□□□□ -1.04
ITGB1-201ENST00000302278 CHL1O00533 1208 aa8.53□□□□□ -1.04
ITGB1-201ENST00000302278 MAP3K11Q16584 847 aa8.53□□□□□ -1.04
ITGB1-201ENST00000302278 CELF1Q92879 486 aaKnown RBP8.53□□□□□ -1.04
ITGB1-201ENST00000302278 ZBED3Q96IU2 234 aaPredicted RBP8.53□□□□□ -1.04
ITGB1-201ENST00000302278 TRPA1O75762 1119 aa8.52□□□□□ -1.05
ITGB1-201ENST00000302278 HCLS1P14317 486 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-201ENST00000302278 TBC1D10BQ4KMP7 808 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-201ENST00000302278 COPS6Q7L5N1 327 aa8.52□□□□□ -1.05
ITGB1-201ENST00000302278 ZNF408Q9H9D4 720 aa8.52□□□□□ -1.05
ITGB1-201ENST00000302278 DLK2Q6UY11 383 aa8.52□□□□□ -1.05
ITGB1-201ENST00000302278 SULF1Q8IWU6 871 aa8.52□□□□□ -1.05
ITGB1-201ENST00000302278 XAGE3Q8WTP9 111 aa8.52□□□□□ -1.05
ITGB1-201ENST00000302278 ZNF296Q8WUU4 475 aaPredicted RBP8.52□□□□□ -1.05
ITGB1-201ENST00000302278 TRMT112Q9UI30 125 aaKnown RBP8.52□□□□□ -1.05
ITGB1-201ENST00000302278 NGEFQ8N5V2 710 aa8.52□□□□□ -1.05
ITGB1-201ENST00000302278 LMOD3Q0VAK6 560 aa8.51□□□□□ -1.05
ITGB1-201ENST00000302278 DBNDD1Q9H9R9 158 aa8.51□□□□□ -1.05
ITGB1-201ENST00000302278 TSPYL4Q9UJ04 414 aa8.51□□□□□ -1.05
ITGB1-201ENST00000302278 MYO3BQ8WXR4 1341 aa8.51□□□□□ -1.05
ITGB1-201ENST00000302278 SCARF1Q14162 830 aa8.51□□□□□ -1.05
ITGB1-201ENST00000302278 LDLRAD1Q5T700 205 aa8.51□□□□□ -1.05
ITGB1-201ENST00000302278 INTS3Q68E01 1043 aaKnown RBP8.51□□□□□ -1.05
ITGB1-201ENST00000302278 THUMPD2Q9BTF0 503 aaKnown RBP8.51□□□□□ -1.05
ITGB1-201ENST00000302278 MYOZ2Q9NPC6 264 aa8.51□□□□□ -1.05
ITGB1-201ENST00000302278 KCNQ5Q9NR82 932 aa8.51□□□□□ -1.05
ITGB1-201ENST00000302278 ASTN2O75129 1339 aaPredicted RBP8.51□□□□□ -1.05
ITGB1-201ENST00000302278 GPR25O00155 361 aa8.5□□□□□ -1.05
ITGB1-201ENST00000302278 SREBF2Q12772 1141 aa8.5□□□□□ -1.05
ITGB1-201ENST00000302278 HSP90B1P14625 803 aaKnown RBP8.5□□□□□ -1.05
ITGB1-201ENST00000302278 PODNQ7Z5L7 613 aa8.5□□□□□ -1.05
ITGB1-201ENST00000302278 RPS8P62241 208 aaKnown RBP8.5□□□□□ -1.05
ITGB1-201ENST00000302278 ANGEL2Q5VTE6 544 aaKnown RBP8.5□□□□□ -1.05
ITGB1-201ENST00000302278 ZBTB38Q8NAP3 1195 aaPredicted RBP8.5□□□□□ -1.05
ITGB1-201ENST00000302278 ARMC5Q96C12 935 aa8.5□□□□□ -1.05
ITGB1-201ENST00000302278 TCERG1O14776 1098 aaKnown RBP8.49□□□□□ -1.05
ITGB1-201ENST00000302278 ALDH1A1P00352 501 aa8.49□□□□□ -1.05
ITGB1-201ENST00000302278 NEFMP07197 916 aa8.49□□□□□ -1.05
ITGB1-201ENST00000302278 HABP4Q5JVS0 413 aaKnown RBP8.49□□□□□ -1.05
ITGB1-201ENST00000302278 TESPA1A2RU30 521 aaPredicted RBP8.49□□□□□ -1.05
ITGB1-201ENST00000302278 PDE4DIPQ5VU43 2346 aa8.49□□□□□ -1.05
ITGB1-201ENST00000302278 MTMR14Q8NCE2 650 aa8.49□□□□□ -1.05
ITGB1-201ENST00000302278 XDHP47989 1333 aa8.49□□□□□ -1.05
ITGB1-201ENST00000302278 IRS2Q9Y4H2 1338 aa8.49□□□□□ -1.05
ITGB1-201ENST00000302278 FKTNO75072 461 aa8.49□□□□□ -1.05
ITGB1-201ENST00000302278 INHBEP58166 350 aa8.49□□□□□ -1.05
ITGB1-201ENST00000302278 HYPKQ9NX55 129 aa8.49□□□□□ -1.05
ITGB1-201ENST00000302278 ATP2B4P23634 1241 aa8.48□□□□□ -1.05
ITGB1-201ENST00000302278 DBF4Q9UBU7 674 aaPredicted RBP8.48□□□□□ -1.05
ITGB1-201ENST00000302278 NSFL1CQ9UNZ2 370 aaKnown RBP8.48□□□□□ -1.05
ITGB1-201ENST00000302278 PPP2R3BQ9Y5P8 575 aa8.48□□□□□ -1.05
ITGB1-201ENST00000302278 PCCAP05165 728 aaPredicted RBP8.48□□□□□ -1.05
ITGB1-201ENST00000302278 USP17L8P0C7I0 530 aa8.48□□□□□ -1.05
ITGB1-201ENST00000302278 ZBTB48P10074 688 aaPredicted RBP8.48□□□□□ -1.05
ITGB1-201ENST00000302278 TMPOP42166 694 aaKnown RBP8.48□□□□□ -1.05
ITGB1-201ENST00000302278 DACT2Q5SW24 774 aa8.48□□□□□ -1.05
ITGB1-201ENST00000302278 ANKRD13DQ6ZTN6 518 aa8.48□□□□□ -1.05
ITGB1-201ENST00000302278 CFAP44Q96MT7 982 aa8.48□□□□□ -1.05
ITGB1-201ENST00000302278 GGA1Q9UJY5 639 aa8.48□□□□□ -1.05
ITGB1-201ENST00000302278 USP17L3A6NCW0 530 aa8.48□□□□□ -1.05
ITGB1-201ENST00000302278 USP17L4A6NCW7 530 aa8.48□□□□□ -1.05
ITGB1-201ENST00000302278 USP17L1Q7RTZ2 530 aa8.48□□□□□ -1.05
ITGB1-201ENST00000302278 ZC3H12CQ9C0D7 883 aaKnown RBP8.48□□□□□ -1.05
ITGB1-201ENST00000302278 MAPK8IP3Q9UPT6 1336 aa8.47□□□□□ -1.05
ITGB1-201ENST00000302278 IRS4O14654 1257 aaPredicted RBP8.47□□□□□ -1.05
ITGB1-201ENST00000302278 ZNF853P0CG23 659 aa8.47□□□□□ -1.05
ITGB1-201ENST00000302278 CHPF2Q9P2E5 772 aa8.47□□□□□ -1.05
ITGB1-201ENST00000302278 DOK7Q18PE1 504 aa8.47□□□□□ -1.05
ITGB1-201ENST00000302278 STRIP1Q5VSL9 837 aa8.47□□□□□ -1.05
ITGB1-201ENST00000302278 SPRYD7Q5W111 196 aa8.47□□□□□ -1.05
ITGB1-201ENST00000302278 C15orf52Q6ZUT6 534 aaKnown RBP8.47□□□□□ -1.05
ITGB1-201ENST00000302278 CCDC191Q8NCU4 936 aa8.47□□□□□ -1.05
ITGB1-201ENST00000302278 TRIM35Q9UPQ4 493 aa8.47□□□□□ -1.05
ITGB1-201ENST00000302278 FKBP1AP62942 108 aaKnown RBP8.47□□□□□ -1.05
ITGB1-201ENST00000302278 APOBEC3FQ8IUX4 373 aaKnown RBP8.47□□□□□ -1.05
ITGB1-201ENST00000302278 MANSC4A6NHS7 340 aaPredicted RBP8.46□□□□□ -1.05
ITGB1-201ENST00000302278 C6orf229H3BNL8 230 aa8.46□□□□□ -1.05
ITGB1-201ENST00000302278 PDE8AO60658 829 aa8.46□□□□□ -1.05
ITGB1-201ENST00000302278 TBC1D8O95759 1140 aa8.46□□□□□ -1.05
ITGB1-201ENST00000302278 ANXA1P04083 346 aa8.46□□□□□ -1.05
ITGB1-201ENST00000302278 FXR1P51114 621 aaKnown RBP eCLIP8.46□□□□□ -1.055e-10■■■□□ 15.4
ITGB1-201ENST00000302278 FAM89AQ96GI7 184 aa8.46□□□□□ -1.05
ITGB1-201ENST00000302278 HTTP42858 3142 aa8.46□□□□□ -1.05
ITGB1-201ENST00000302278 RIMBP2O15034 1052 aa8.46□□□□□ -1.06
ITGB1-201ENST00000302278 UFL1O94874 794 aa8.46□□□□□ -1.06
ITGB1-201ENST00000302278 RIPK4P57078 832 aa8.46□□□□□ -1.06
ITGB1-201ENST00000302278 PCGF6Q9BYE7 350 aa8.46□□□□□ -1.06
ITGB1-201ENST00000302278 MGAMO43451 1857 aa8.46□□□□□ -1.06
ITGB1-201ENST00000302278 WNT10BO00744 389 aa8.46□□□□□ -1.06
ITGB1-201ENST00000302278 CCDC152Q4G0S7 254 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms