RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 USH1CQ9Y6N9 552 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 VWFP04275 2813 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 CHP2O43745 196 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 TRMUO75648 421 aaKnown RBP10.87□□□□□ -0.67
LINC00339-206ENST00000634451 OR6A2O95222 327 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 ASAH2BP0C7U1 165 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 FUT1P19526 365 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 DRD4P21917 467 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 FUT4P22083 530 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 OMGP23515 440 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 CRYBA2P53672 197 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 PCBP3P57721 371 aaKnown RBP10.87□□□□□ -0.67
LINC00339-206ENST00000634451 CLRN1P58418 232 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 ERVK-25P63136 954 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 RPL18Q07020 188 aaKnown RBP10.87□□□□□ -0.67
LINC00339-206ENST00000634451 HIST3H3Q16695 136 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 BLOC1S3Q6QNY0 202 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 EPGNQ6UW88 154 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 SHISA2Q6UWI4 295 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 TREML4Q6UXN2 200 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 RANBP3LQ86VV4 465 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-206ENST00000634451 SNX32Q86XE0 403 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 KRT73Q86Y46 540 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 MOSPD2Q8NHP6 518 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 ADAMTS16Q8TE57 1224 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 NSMAFQ92636 917 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 NMD3Q96D46 503 aaKnown RBP10.87□□□□□ -0.67
LINC00339-206ENST00000634451 SPDL1Q96EA4 605 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 ELMOD3Q96FG2 381 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 POM121L2Q96KW2 1035 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 PRSS27Q9BQR3 290 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 MRPL13Q9BYD1 178 aaKnown RBP10.87□□□□□ -0.67
LINC00339-206ENST00000634451 TMEM38AQ9H6F2 299 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.87□□□□□ -0.67
LINC00339-206ENST00000634451 FBXL3Q9UKT7 428 aa10.87□□□□□ -0.67
LINC00339-206ENST00000634451 SLC22A23A1A5C7 686 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 C5orf49A4QMS7 147 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 BLOC1S5-TXNDC5H3BN57 136 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 SHOX2O60902 331 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-206ENST00000634451 FARS2O95363 451 aaKnown RBP10.86□□□□□ -0.67
LINC00339-206ENST00000634451 IGHV2-70P01814 119 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 IGHG1P01857 330 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 SBK2P0C263 348 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 IGHV4-38-2P0DP08 117 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 UMPSP11172 480 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 GPX2P18283 190 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 TNFRSF1BP20333 461 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 CD247P20963 164 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 MDKP21741 143 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-206ENST00000634451 SLC6A2P23975 617 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 PRTN3P24158 256 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 STOMP27105 288 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 AQP2P41181 271 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 ERFP50548 548 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 UGT2B15P54855 530 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 MTPNP58546 118 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 SELENOVP59797 346 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 HSF2Q03933 536 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 SLC36A2Q495M3 483 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 MIDNQ504T8 468 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 OTPQ5XKR4 325 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 LEG1Q6P5S2 330 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 ZNF613Q6PF04 617 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 DLEU7Q6UYE1 221 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 DOK3Q7L591 496 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 HIPK4Q8NE63 616 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 ABHD4Q8TB40 342 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 KLF14Q8TD94 323 aaPredicted RBP10.86□□□□□ -0.67
LINC00339-206ENST00000634451 ASB10Q8WXI3 467 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 HDAC2Q92769 488 aaKnown RBP10.86□□□□□ -0.67
LINC00339-206ENST00000634451 RAB1CQ92928 201 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 TAMM41Q96BW9 452 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 TIMD4Q96H15 378 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 SEPHS2Q99611 448 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 ZNF426Q9BUY5 554 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 SPATA5L1Q9BVQ7 753 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 BCL2L14Q9BZR8 327 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 SLCO1B3Q9NPD5 702 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 NANSQ9NR45 359 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 C20orf141Q9NUB4 165 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 PURGQ9UJV8 347 aaKnown RBP10.86□□□□□ -0.67
LINC00339-206ENST00000634451 SLC13A4Q9UKG4 626 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 ANGPT4Q9Y264 503 aa10.86□□□□□ -0.67
LINC00339-206ENST00000634451 IQCMA0A1B0GVH7 501 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 PRORSD1PA6NEY8 169 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 M0QX08 132 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 PIP5K1CO60331 668 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 GPANK1O95872 356 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 APLNRP35414 380 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 IDH3AP50213 366 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 PSG4Q00888 419 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 TEKQ02763 1124 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 FOXL1Q12952 345 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 ZNF154Q13106 437 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 ARMCX4Q5H9R4 360 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 SWT1Q5T5J6 900 aaKnown RBP10.85□□□□□ -0.67
LINC00339-206ENST00000634451 TTC33Q6PID6 262 aaPredicted RBP10.85□□□□□ -0.67
LINC00339-206ENST00000634451 NANOGNBQ7Z5D8 188 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 RETREG3Q86VR2 466 aa10.85□□□□□ -0.67
LINC00339-206ENST00000634451 NKAIN4Q8IVV8 208 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms