RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 FBXO4Q9UKT5 387 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 OR10H1Q9Y4A9 318 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 TMEM14AQ9Y6G1 99 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 KANTRA0A1W2PQU2 76 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 SULT1C2O00338 296 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 BCL2L11O43521 198 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 ALOX12BO75342 701 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 ZNF735P0CB33 412 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 GLULP15104 373 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 STARP49675 285 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 PPP1CAP62136 330 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 FGL1Q08830 312 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 HYAL4Q2M3T9 481 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 EMC4Q5J8M3 183 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 TMEM205Q6UW68 189 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 C16orf52Q8NHV5 167 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 LMF1Q96S06 567 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 GDE1Q9NZC3 331 aa17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 GPN3Q9UHW5 284 aaPredicted RBP17.69■□□□□ 0.42
PDLIM3-212ENST00000620787 TTLL8A6PVC2 850 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 AMY2AP04746 511 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 GP1BAP07359 652 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 GPR3P46089 330 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 FLI1Q01543 452 aaPredicted RBP17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 DHRS2Q13268 280 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 CD226Q15762 336 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 PLPP7Q8NBV4 271 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 OR5T2Q8NGG2 359 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 OR1J4Q8NGS1 313 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 THRSPQ92748 146 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 ZNF524Q96C55 264 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 CCDC3Q9BQI4 270 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 SYT4Q9H2B2 425 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 HPF1Q9NWY4 346 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 LRP4O75096 1905 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 SMAD9O15198 467 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 RAD1O60671 282 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 OR2F2O95006 317 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 RENP00797 406 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 SLC25A4P12235 298 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 CTAG1AP78358 180 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 OR2F1Q13607 317 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 DEFB110Q30KQ9 67 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 FNDC7Q5VTL7 733 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 OTPQ5XKR4 325 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 OR2W3Q7Z3T1 314 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 ARHGEF39Q8N4T4 335 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 OTOSQ8NHW6 89 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 VRK1Q99986 396 aaPredicted RBP17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 EDEM2Q9BV94 578 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 PURGQ9UJV8 347 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 SLC22A13Q9Y226 551 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 ZNF175Q9Y473 711 aa17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 KLF2Q9Y5W3 355 aaPredicted RBP17.68■□□□□ 0.42
PDLIM3-212ENST00000620787 CHD9Q3L8U1 2897 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 ALPK2Q86TB3 2170 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 RNF222A6NCQ9 220 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 PHYHO14832 338 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 KIR2DL1P43626 348 aaPredicted RBP17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 CCR4P51679 360 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 C11orf87Q6NUJ2 197 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 KTI12Q96EK9 354 aaPredicted RBP17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 SLC41A2Q96JW4 573 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 ELOVL3Q9HB03 270 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 CYB5R1Q9UHQ9 305 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 PPIAP62937 165 aaKnown RBP17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 SKP2Q13309 424 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 SLC17A1Q14916 467 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 LPCAT3Q6P1A2 487 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 CBLN3Q6UW01 205 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 TMEM184AQ6ZMB5 413 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 ZNF627Q7L945 461 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 PM20D2Q8IYS1 436 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 TMEM185AQ8NFB2 350 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 PPP1R14AQ96A00 147 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 ELSPBP1Q96BH3 223 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 BMFQ96LC9 184 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 OR8B4Q96RC9 309 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 ELF4Q99607 663 aaPredicted RBP17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 FAM60AQ9NP50 221 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 HRASLS2Q9NWW9 162 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 CDH23Q9H251 3354 aa17.67■□□□□ 0.42
PDLIM3-212ENST00000620787 OR2W5A6NFC9 320 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 PRKNO60260 465 aaPredicted RBP17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 DOK2O60496 412 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 CD34P28906 385 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 IGLV3-21P80748 117 aaPredicted RBP17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 MEP1BQ16820 701 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 SHEQ5VZ18 495 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 SFTPA2Q8IWL1 248 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 PHYHIPLQ96FC7 376 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 PTDSS2Q9BVG9 487 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 SCPEP1Q9HB40 452 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 CLDN16Q9Y5I7 305 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 LINC01553A4QN01 128 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 K7EQS6 105 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 CCSO14618 274 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 SIGLEC6O43699 453 aa17.66■□□□□ 0.42
PDLIM3-212ENST00000620787 PNPP00491 289 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms