RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SIGLEC14Q08ET2 396 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 CHIT1Q13231 466 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF234Q14588 700 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF235Q14590 738 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 INSL4Q14641 139 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 JOSD1Q15040 202 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PGGHGQ32M88 737 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 NDUFAF6Q330K2 333 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PLEKHS1Q5SXH7 462 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 RIPPLY2Q5TAB7 128 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ARHGAP40Q5TG30 622 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 FAM46CQ5VWP2 391 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 WSCD1Q658N2 575 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TPGS2Q68CL5 300 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TBC1D3GQ6DHY5 549 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ABLIM2Q6H8Q1 611 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PWWP2BQ6NUJ5 590 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 RPL22L1Q6P5R6 122 aaKnown RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 LCTLQ6UWM7 567 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 IL20RBQ6UXL0 311 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF852Q6ZMS4 543 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 Q6ZRM9 215 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TPGS1Q6ZTW0 290 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 RANBP3LQ86VV4 465 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TGIF2LXQ8IUE1 241 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 GALNT16Q8N428 558 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TRAM1L1Q8N609 369 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 IQCF1Q8N6M8 205 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TMEM229BQ8NBD8 167 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 UBAC2Q8NBM4 344 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 HSD17B11Q8NBQ5 300 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 INO80EQ8NBZ0 244 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR2L5Q8NG80 312 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR4D9Q8NGE8 314 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR5T3Q8NGG3 340 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR4D11Q8NGI4 311 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR1J1Q8NGS3 322 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR4Q3Q8NH05 313 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TERB2Q8NHR7 220 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 SLC38A5Q8WUX1 472 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 DNAJB3Q8WWF6 145 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ROBO4Q8WZ75 1007 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF707Q96C28 371 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PPCDCQ96CD2 204 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 GALNT14Q96FL9 552 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PCED1BQ96HM7 432 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 KLHL5Q96PQ7 755 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 GPA33Q99795 319 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ADAT1Q9BUB4 502 aaKnown RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF471Q9BX82 626 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PINK1Q9BXM7 581 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 LAT2Q9GZY6 243 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR51I1Q9H343 314 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PTGES2Q9H7Z7 377 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ISG20L2Q9H9L3 353 aaKnown RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 MYOZ2Q9NPC6 264 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ANKRD10Q9NXR5 420 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 RHCGQ9UBD6 479 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 KLK11Q9UBX7 282 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 GJD2Q9UKL4 321 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 GAB2Q9UQC2 676 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PCYT1BQ9Y5K3 369 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 NLRC5Q86WI3 1866 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 HELZP42694 1942 aaKnown RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PLXNB3Q9ULL4 1909 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 WDR90Q96KV7 1748 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 COL16A1Q07092 1604 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 NUP210Q8TEM1 1887 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 IGLV3-16A0A075B6K0 115 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 A0A0A6YYH2 397 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 SLC5A10A0PJK1 596 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 GXYLT2A0PJZ3 443 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 A6NJ64 397 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR2AT4A6NND4 320 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 IQCF5A8MTL0 148 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 H3BNC9 293 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 H7C4K7 107 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF561-AS1K7EIQ3 104 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 GAPDHSO14556 408 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 DVL2O14641 736 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF197O14709 1029 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 P2RX6O15547 441 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 DLEU1O43261 78 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 TSPAN2O60636 221 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 FMO6PO60774 539 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 GLCEO94923 617 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 ABLIM3O94929 683 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 NSA2O95478 260 aaKnown RBP3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 RAB3DO95716 219 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 GCGP01275 180 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 IGLV3-27P01718 113 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 APODP05090 189 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 CTSLP07711 333 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 GJB1P08034 283 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 SFTA3P0C7M3 94 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR2T7P0C7T2 308 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 TBC1D3HP0C7X1 549 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 FOLR1P15328 257 aa3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 CSRP1P21291 193 aaKnown RBP3.67□□□□□ -1.82
HMGB1P50-201ENST00000605814 FGF7P21781 194 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms