RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZNF75AQ96N20 296 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 ZNF587Q96SQ5 575 aaPredicted RBP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 MRIQ9BWK5 157 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 SPATC1LQ9H0A9 340 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 TMEM231Q9H6L2 316 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 TMEM185BQ9H7F4 350 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 TNFRSF12AQ9NP84 129 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 LYRM2Q9NU23 88 aaPredicted RBP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 MRPL22Q9NWU5 206 aaKnown RBP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 MRPL27Q9P0M9 148 aaKnown RBP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 ZNF230Q9UIE0 474 aaPredicted RBP8.08□□□□□ -1.12
COMMD3-215ENST00000602574 ZNF337Q9Y3M9 751 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 NME7Q9Y5B8 376 aa8.08□□□□□ -1.12
COMMD3-215ENST00000602574 IRGMA1A4Y4 181 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 UNC119BA6NIH7 251 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 C17orf105B2RV13 164 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 CORTO00230 105 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 TXNDC12O95881 172 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 WNT1P04628 370 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 FAM157CP0CG43 387 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 LIPCP11150 499 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 ARSAP15289 507 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 CTSSP25774 331 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 IL12BP29460 328 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 PTGER4P35408 488 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 IGFALSP35858 605 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 SSBP2P81877 361 aaPredicted RBP8.07□□□□□ -1.12
COMMD3-215ENST00000602574 CDK5Q00535 292 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 PRDX4Q13162 271 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 PLPPR5Q32ZL2 321 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 TCTEX1D4Q5JR98 221 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 NBPF12Q5TAG4 269 aaPredicted RBP8.07□□□□□ -1.12
COMMD3-215ENST00000602574 GDF7Q7Z4P5 450 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 KDM8Q8N371 416 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 HORMAD2Q8N7B1 307 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 BOLLQ8N9W6 283 aaKnown RBP8.07□□□□□ -1.12
COMMD3-215ENST00000602574 CYB561A3Q8NBI2 242 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 MCHR2Q969V1 340 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 MOB3AQ96BX8 217 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 C1GALT1C1Q96EU7 318 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 ZNF764Q96H86 408 aaPredicted RBP8.07□□□□□ -1.12
COMMD3-215ENST00000602574 IP6K3Q96PC2 410 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 MRPL45Q9BRJ2 306 aaKnown RBP8.07□□□□□ -1.12
COMMD3-215ENST00000602574 SSBP4Q9BWG4 385 aaPredicted RBP8.07□□□□□ -1.12
COMMD3-215ENST00000602574 ATG5Q9H1Y0 275 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 SIDT1Q9NXL6 827 aaKnown RBP8.07□□□□□ -1.12
COMMD3-215ENST00000602574 OR5AC2Q9NZP5 309 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 POLR3KQ9Y2Y1 108 aaPredicted RBP8.07□□□□□ -1.12
COMMD3-215ENST00000602574 RPL36Q9Y3U8 105 aaKnown RBP8.07□□□□□ -1.12
COMMD3-215ENST00000602574 STYXL1Q9Y6J8 313 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 ENPP4Q9Y6X5 453 aa8.07□□□□□ -1.12
COMMD3-215ENST00000602574 TRAV26-1A0A087WT03 109 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 A0A087WZ62 844 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 TMEM129A0AVI4 362 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 ANKRD61A6NGH8 418 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 A8MT66 165 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 FAAHO00519 579 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 ARPC1BO15143 372 aaKnown RBP8.06□□□□□ -1.12
COMMD3-215ENST00000602574 ATXN7O15265 892 aaPredicted RBP8.06□□□□□ -1.12
COMMD3-215ENST00000602574 OR1F1O43749 312 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 HYAL3O43820 417 aaPredicted RBP8.06□□□□□ -1.12
COMMD3-215ENST00000602574 ENTPD6O75354 484 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 SCGNO76038 276 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 C4BPAP04003 597 aaKnown RBP8.06□□□□□ -1.12
COMMD3-215ENST00000602574 TRGC1P0CF51 173 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 F3P13726 295 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 HGFP14210 728 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 H3F3AP84243 136 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 FZD5Q13467 585 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 GTF2H3Q13889 308 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 TEAD2Q15562 447 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 TMEM249Q2WGJ8 235 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 ATP6AP1LQ52LC2 224 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 EIPR1Q53HC9 387 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 XKR6Q5GH73 641 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 TECRLQ5HYJ1 363 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 AWAT2Q6E213 333 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 KIAA1211LQ6NV74 962 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 LAS2Q8IYD9 372 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 OR10H4Q8NGA5 316 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 TWIST2Q8WVJ9 160 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 SMARCD2Q92925 531 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 TMEM186Q96B77 213 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 ABHD1Q96SE0 405 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 RBKSQ9H477 322 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 LANCL2Q9NS86 450 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 ASB6Q9NWX5 421 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 ASF1AQ9Y294 204 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 FIS1Q9Y3D6 152 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 FNDC1Q4ZHG4 1894 aaPredicted RBP8.06□□□□□ -1.12
COMMD3-215ENST00000602574 KCNE1BA0A087WTH5 132 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 A0A1W2PPE2 198 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 A4D1N5 150 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 TMEM235A6NFC5 223 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 NFKBIEO00221 500 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 AQP7O14520 342 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 PRRG1O14668 218 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 SLC16A5O15375 505 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 XRCC3O43542 346 aa8.06□□□□□ -1.12
COMMD3-215ENST00000602574 GPR37L1O60883 481 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms