RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 M0R3H8 397 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 PLPP2O43688 288 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 CLPTM1O96005 669 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 IGHV3-13P01766 116 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 ASAH2BP0C7U1 165 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 PCBP3P57721 371 aaKnown RBP14.5□□□□□ -0.09
PNKP-210ENST00000597965 NPTX1Q15818 432 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 HIST3H3Q16695 136 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 DUSP7Q16829 419 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 ZNF718Q3SXZ3 478 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 INTS11Q5TA45 600 aaKnown RBP14.5□□□□□ -0.09
PNKP-210ENST00000597965 USP51Q70EK9 711 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 PATL1Q86TB9 770 aaKnown RBP14.5□□□□□ -0.09
PNKP-210ENST00000597965 WDFY1Q8IWB7 410 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 C10orf111Q8N326 155 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 ICA1LQ8NDH6 482 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 OR6T1Q8NGN1 323 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 FGFBP3Q8TAT2 258 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 EGLN1Q9GZT9 426 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 CCNB1IP1Q9NPC3 277 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 LEF1Q9UJU2 399 aaPredicted RBP14.5□□□□□ -0.09
PNKP-210ENST00000597965 SLC7A7Q9UM01 511 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 TRIM33Q9UPN9 1127 aa14.5□□□□□ -0.09
PNKP-210ENST00000597965 TENM1Q9UKZ4 2725 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 BLOC1S5-TXNDC5H3BN57 136 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 M0QX08 132 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 RGS9O75916 674 aaPredicted RBP14.49□□□□□ -0.09
PNKP-210ENST00000597965 IGHV2-5P01817 119 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 CCL2P13500 99 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 CD247P20963 164 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 IDH3AP50213 366 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 ZNF81P51508 661 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 MELKQ14680 651 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 AGKQ53H12 422 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 ZMAT1Q5H9K5 638 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 AVPI1Q5T686 147 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 RBMS3Q6XE24 437 aaKnown RBP14.49□□□□□ -0.09
PNKP-210ENST00000597965 PAQR4Q8N4S7 273 aaPredicted RBP14.49□□□□□ -0.09
PNKP-210ENST00000597965 OR1J1Q8NGS3 322 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 MCHR2Q969V1 340 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 DIRC2Q96SL1 478 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 GAL3ST1Q99999 423 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 TMPRSS13Q9BYE2 586 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 PCDHAC1Q9H158 963 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 OR51B6Q9H340 312 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 IKZF5Q9H5V7 419 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 SIAEQ9HAT2 523 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 SMURF2Q9HAU4 748 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 DDX28Q9NUL7 540 aaKnown RBP14.49□□□□□ -0.09
PNKP-210ENST00000597965 WIPI2Q9Y4P8 454 aa14.49□□□□□ -0.09
PNKP-210ENST00000597965 WNK2Q9Y3S1 2297 aa14.48□□□□□ -0.09
PNKP-210ENST00000597965 DEAF1O75398 565 aaPredicted RBP14.48□□□□□ -0.09
PNKP-210ENST00000597965 CCNOP22674 350 aa14.48□□□□□ -0.09
PNKP-210ENST00000597965 STOMP27105 288 aa14.48□□□□□ -0.09
PNKP-210ENST00000597965 SF3A3Q12874 501 aaKnown RBP eCLIP14.48□□□□□ -0.094e-6■■■□□ 15.4
PNKP-210ENST00000597965 RUNDC3AQ59EK9 446 aa14.48□□□□□ -0.09
PNKP-210ENST00000597965 LRRC18Q8N456 261 aa14.48□□□□□ -0.09
PNKP-210ENST00000597965 NOXO1Q8NFA2 376 aa14.48□□□□□ -0.09
PNKP-210ENST00000597965 ST7LQ8TDW4 575 aa14.48□□□□□ -0.09
PNKP-210ENST00000597965 WFDC6Q9BQY6 131 aa14.48□□□□□ -0.09
PNKP-210ENST00000597965 CPPED1Q9BRF8 314 aaPredicted RBP14.48□□□□□ -0.09
PNKP-210ENST00000597965 ZNF426Q9BUY5 554 aa14.48□□□□□ -0.09
PNKP-210ENST00000597965 C7orf69Q9H7B7 122 aa14.48□□□□□ -0.09
PNKP-210ENST00000597965 NDUFAF1Q9Y375 327 aa14.48□□□□□ -0.09
PNKP-210ENST00000597965 PPIAL4EA0A075B759 164 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 PPIAL4CA0A0B4J2A2 164 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 PPIAL4DF5H284 164 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 H3BSA7 217 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 KPNA4O00629 521 aaPredicted RBP14.47□□□□□ -0.09
PNKP-210ENST00000597965 ANGPT2O15123 496 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 IGF2P01344 180 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 PPIAL4FP0DN26 164 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 RBM34P42696 430 aaKnown RBP14.47□□□□□ -0.09
PNKP-210ENST00000597965 GUCA1AP43080 201 aaPredicted RBP14.47□□□□□ -0.09
PNKP-210ENST00000597965 MRPS34P82930 218 aaKnown RBP14.47□□□□□ -0.09
PNKP-210ENST00000597965 FOXL1Q12952 345 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 TSTQ16762 297 aaKnown RBP14.47□□□□□ -0.09
PNKP-210ENST00000597965 C10orf128Q5T292 105 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 ARL9Q6T311 187 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 DLEU7Q6UYE1 221 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 C1orf229Q6ZS94 237 aaPredicted RBP14.47□□□□□ -0.09
PNKP-210ENST00000597965 ALDH16A1Q8IZ83 802 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 LRRC17Q8N6Y2 441 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 FNDC8Q8TC99 324 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 CCL17Q92583 94 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 TSPAN32Q96QS1 320 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 SEPHS2Q99611 448 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 MRPL13Q9BYD1 178 aaKnown RBP14.47□□□□□ -0.09
PNKP-210ENST00000597965 POLR2J2Q9GZM3 115 aaKnown RBP14.47□□□□□ -0.09
PNKP-210ENST00000597965 POLR2J3Q9H1A7 115 aaKnown RBP14.47□□□□□ -0.09
PNKP-210ENST00000597965 ZDHHC8Q9ULC8 765 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 ARL2BPQ9Y2Y0 163 aa14.47□□□□□ -0.09
PNKP-210ENST00000597965 FOXH1O75593 365 aa14.46□□□□□ -0.09
PNKP-210ENST00000597965 AVPP01185 164 aa14.46□□□□□ -0.09
PNKP-210ENST00000597965 MT-ND1P03886 318 aa14.46□□□□□ -0.09
PNKP-210ENST00000597965 OPN1SWP03999 348 aa14.46□□□□□ -0.09
PNKP-210ENST00000597965 MMP7P09237 267 aaPredicted RBP14.46□□□□□ -0.09
PNKP-210ENST00000597965 ACADSP16219 412 aa14.46□□□□□ -0.09
PNKP-210ENST00000597965 EGR1P18146 543 aa14.46□□□□□ -0.09
PNKP-210ENST00000597965 GDI2P50395 445 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms